Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p26460 Brassica napus
A04p21190 Brassica napus
Aa31LG5G8160 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.107 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.1683 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.402 Anthoceros agrestis
Actinidia07194 Actinidia chinensis
Actinidia24157 Actinidia chinensis
Ah.01g015940 Amaranthus hybridus
AL4G12830 Arabidopsis lyrata
AL4G22350 Arabidopsis lyrata
AL580U10010 Arabidopsis lyrata
Aqoxy2G01562 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.533Y7U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B084HG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FLM5Q5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LCV131 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MMVL4X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PN7A9Z Arachis hypogaea
AT2G27900 Arabidopsis thaliana
ATR1158G033 Amborella trichopoda
Atru.chr2.695 Acer truncatum
Atru.chr3.3492 Acer truncatum
AUR62024038 Chenopodium quinoa
AUR62041305 Chenopodium quinoa
BcaB01g03084 Brassica carinata
BcaB06g28175 Brassica carinata
BcaC01g02437 Brassica carinata
BcaC01g04955 Brassica carinata
BcaC02g08224 Brassica carinata
BolC3t15517H Brassica oleracea
BolC4t27237H Brassica oleracea
BraA03t11860Z Brassica rapa
BraA04t17688Z Brassica rapa
C03p31750 Brassica napus
C03p65310 Brassica napus
C04p57020 Brassica napus
C06p19250 Brassica napus
C06p24240 Brassica napus
CAN.G644.49 Capsicum annuum
CANSAT64G0934 Cannabis sativa
CANSAT64G1073 Cannabis sativa
CANSAT64G1975 Cannabis sativa
CARHR120590 Cardamine hirsuta
Carub.0004s0864 Capsella rubella
Ca_19329_v3 Cicer arietinum L.
CBR_g49688 Chara braunii
Cc01_g10110 Coffea canephora
CDE08G1223 Ceratophyllum demersum
Cfa010130 Carpinus fangiana
Ciclev10027713m.g Citrus clementina
CiPaw.14G105600 Carya illinoinensis
ClCG01G012850 Citrullus lanatus
ClCG01G012880 Citrullus lanatus
COL.COLO4_19229 Corchorus olitorius
Cpa.g.sc47.18 Carica papaya
Cpa.g.sc47.20 Carica papaya
Cpa.g.sc47.22 Carica papaya
Cre10.g443350 Chlamydomonas reinhardtii
CsaV3_1G014440 Cucumis sativus L.
CSS0033419 Camellia sinensis var. sinensis
DCAR_031637 Daucus carota
DCAR_031639 Daucus carota
Dinv12567 Davidia involucrata
Duzib150G0506 Durio zibethinus
Duzib168G0446 Durio zibethinus
ECA238G2607 Erigeron canadensis
EL10Ac9g20998 Beta vulgaris
Eucgr.B03912 Eucalyptus grandis
FAN11G0203 Fragaria x ananassa
FAN11G1674 Fragaria x ananassa
FAN16G3550 Fragaria x ananassa
FAN21G0469 Fragaria x ananassa
FAN21G0688 Fragaria x ananassa
FvH4_3g30380 Fragaria vesca
Glyma.11G191100 Glycine max
Glyma.12G083200 Glycine max
Gohir.A05G084400 Gossypium hirsutum
Gohir.A07G106066 Gossypium hirsutum
Gohir.A07G106132 Gossypium hirsutum
Gohir.D05G087200 Gossypium hirsutum
Gohir.D07G110000 Gossypium hirsutum
Gorai.001G118200 Gossypium raimondii
Gorai.009G089000 Gossypium raimondii
GSVIVG01031444001 Vitis vinifera
HanXRQChr02g0055251 Helianthus annuus
HanXRQChr14g0451831 Helianthus annuus
Haze_23512 Corylus avellana
Haze_23513 Corylus avellana
Haze_23514 Corylus avellana
Haze_23515 Corylus avellana
Hma1.2p1_1225F.1_g268540 Hydrangea macrophylla
HPP92_022568 Vanilla planifolia
HPP92_022569 Vanilla planifolia
HPP92_022573 Vanilla planifolia
Hund00854 Selenicereus undatus
Hund07762 Selenicereus undatus
Lalb_Chr01g0004661 Lupinus albus
Lalb_Chr19g0136831 Lupinus albus
Lj2A1002G13 Lonicera japonica
Lj2A1002G14 Lonicera japonica
Lj2C1000T5 Lonicera japonica
Lj2C1000T6 Lonicera japonica
Lj3g0000902 Lotus japonicus
Lsat_1_v5_gn_2_99000 Lactuca sativa
Lsat_1_v5_gn_6_42101 Lactuca sativa
Manes.11G154000 Manihot esculenta
Mapoly0001s0255 Marchantia polymorpha
MBI18_g10967_MAGBIO Magnolia biondii
MCO09G744 Micromonas commoda
MD01G1172900 Malus domestica
MD03G1129700 Malus domestica
MD11G1151500 Malus domestica
Medtr4g056510 Medicago truncatula
MELO3C004814.2 Cucumis melo
Migut.D02305 Erythranthe guttata
MSTRG.18711 Avicennia marina
Nitab4.5_0000173g0340 Nicotiana tabacum
Nitab4.5_0005230g0050 Nicotiana tabacum
Nitab4.5_0011593g0020 Nicotiana tabacum
Nitab4.5_0027393g0010 Nicotiana tabacum
Nn2g13902 Nelumbo nucifera
Oeu007301.5 Olea europaea
Oeu008367.3 Olea europaea
Os10g0546300 Oryza sativa ssp. japonica
Peaxi162Scf00150g00916 Petunia axillaris
Peaxi162Scf00150g00917 Petunia axillaris
PGR102G0426 Punica granatum
Phvul.011G088000 Phaseolus vulgaris
Potri.001G212600 Populus trichocarpa
Potri.009G002900 Populus trichocarpa
Pp3c16_8720 Physcomitrium patens
Pp3c25_5430 Physcomitrium patens
Pp3c5_16860 Physcomitrium patens
PRCOL_00006567 Prasinoderma coloniale
Prupe.6G114700 Prunus persica
Psat7g191400 Pisum sativum
PSO339G0247 Papaver somniferum
PSO801G0568 Papaver somniferum
QL01p014670 Quercus lobata
RcHm_v2.0_Chr5g0056331 Rosa chinensis
Rhsim04G0218400 Rhododendron simsii
Rhsim13G0102300 Rhododendron simsii
Sabra04G0148500 Salix brachista
SalBow6G5048 Salvia bowleyana
Sc06g0008980 Simmondsia chinensis
Sed0021294 Sechium edule
SEGI_08231 Sequoiadendron giganteum
SEGI_13700 Sequoiadendron giganteum
SGA_v2.0_scaffold27G11582 Striga asiatica
SHI06173 Sapria himalayana
SHI06174 Sapria himalayana
SHI06176 Sapria himalayana
SHI06177 Sapria himalayana
SHI06178 Sapria himalayana
SHI06179 Sapria himalayana
SMO118G0476 Selaginella moellendorffii
Sopen11g026290 Solanum pennellii
Sp4g10720 Schrenkiella parvula
TAR476G0003 Trochodendron aralioides
TAR633G0695 Trochodendron aralioides
TAR633G2769 Trochodendron aralioides
THA.LOC104800567 Tarenaya hassleriana
THA.LOC104826398 Tarenaya hassleriana
Thecc.09G295800 Theobroma cacao
Thhalv10016162m.g Eutrema salsugineum
TPR.G35043 Trifolium pratense
TWI75G0197 Tripterygium wilfordii
unitig_746.g26602 Utricularia gibba
unitig_746.g26603 Utricularia gibba
unitig_746.g26604 Utricularia gibba
vmacro03245 Vaccinium macrocarpon
Zm00001eb022740 Zea mays
Zm00001eb302500 Zea mays

User provided reference genes

Program Settings