Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p27340 Brassica napus
A06p02300 Brassica napus
A08p02550 Brassica napus
Aa31LG8G7980 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.798 Anthoceros agrestis
Actinidia09020 Actinidia chinensis
Actinidia21744 Actinidia chinensis
Actinidia32136 Actinidia chinensis
Actinidia39120 Actinidia chinensis
Actinidia39122 Actinidia chinensis
Ah.10g033570 Amaranthus hybridus
Ah.10g033580 Amaranthus hybridus
AL1G59650 Arabidopsis lyrata
AL3G35320 Arabidopsis lyrata
Aqoxy3G00079 Aquilegia oxysepala
Aqoxy3G00091 Aquilegia oxysepala
Aqoxy6G02681 Aquilegia oxysepala
Aqoxy7G01294 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.RPY2B8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SBEJ10 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZVXK34 Arachis hypogaea
AT1G51710 Arabidopsis thaliana
AT3G21280 Arabidopsis thaliana
ATR0789G134 Amborella trichopoda
Atru.chr1.3637 Acer truncatum
Atru.chr8.1187 Acer truncatum
AUR62015743 Chenopodium quinoa
AUR62037625 Chenopodium quinoa
AUR62041068 Chenopodium quinoa
BcaB07g33627 Brassica carinata
BcaC01g01290 Brassica carinata
BcaC08g43331 Brassica carinata
BcaC09g48419 Brassica carinata
BolC1t04957H Brassica oleracea
BolC3t21348H Brassica oleracea
BolC5t32953H Brassica oleracea
BolC6t35793H Brassica oleracea
BraA05t21626Z Brassica rapa
BraA06t23436Z Brassica rapa
BraA08t32295Z Brassica rapa
C01p50000 Brassica napus
C03p90260 Brassica napus
C05p42250 Brassica napus
C06p06860 Brassica napus
CAN.G12.3 Capsicum annuum
CANSAT56G3696 Cannabis sativa
CARHR041870 Cardamine hirsuta
Carub.0001s4058 Capsella rubella
Carub.0003s2127 Capsella rubella
Carub.0003s2128 Capsella rubella
Carub.0003s2129 Capsella rubella
Ca_11704_v3 Cicer arietinum L.
Ca_14199_v3 Cicer arietinum L.
Ca_23300_v3 Cicer arietinum L.
Ca_23623_v3 Cicer arietinum L.
CBR_g3328 Chara braunii
Cc04_g02170 Coffea canephora
CDE07G0617 Ceratophyllum demersum
Ciclev10025482m.g Citrus clementina
CiPaw.01G227100 Carya illinoinensis
CiPaw.02G141900 Carya illinoinensis
CiPaw.05G194700 Carya illinoinensis
ClCG09G000550 Citrullus lanatus
COL.COLO4_30610 Corchorus olitorius
Cpa.g.sc131.36 Carica papaya
Cpa.g.sc131.37 Carica papaya
Cre17.g726050 Chlamydomonas reinhardtii
CsaV3_7G034900 Cucumis sativus L.
CSS0012386 Camellia sinensis var. sinensis
CSS0012463 Camellia sinensis var. sinensis
CSS0027279 Camellia sinensis var. sinensis
CSS0031364 Camellia sinensis var. sinensis
CSS0031715 Camellia sinensis var. sinensis
CSS0035663 Camellia sinensis var. sinensis
DCAR_007610 Daucus carota
DCAR_007611 Daucus carota
Dinv30396 Davidia involucrata
Dinv37931 Davidia involucrata
Duzib160G0604 Durio zibethinus
Duzib192G0196 Durio zibethinus
ECA232G4630 Erigeron canadensis
EL10Ac2g03344 Beta vulgaris
Eucgr.F03104 Eucalyptus grandis
FAN02G0480 Fragaria x ananassa
FAN05G5071 Fragaria x ananassa
FAN09G0688 Fragaria x ananassa
FAN14G2620 Fragaria x ananassa
FvH4_6g32980 Fragaria vesca
Glyma.07G012300 Glycine max
Glyma.08G195900 Glycine max
Gohir.A09G080500 Gossypium hirsutum
Gohir.A10G062050 Gossypium hirsutum
Gohir.D09G080501 Gossypium hirsutum
Gorai.006G096100 Gossypium raimondii
GSVIVG01016888001 Vitis vinifera
HanXRQChr05g0140121 Helianthus annuus
HanXRQChr09g0276341 Helianthus annuus
Haze_15924 Corylus avellana
Haze_26391 Corylus avellana
HPP92_005519 Vanilla planifolia
Hund00756 Selenicereus undatus
Lalb_Chr04g0263081 Lupinus albus
Lalb_Chr25g0280531 Lupinus albus
Lj3g0023335 Lotus japonicus
Lj5A49T39 Lonicera japonica
Lsat_1_v5_gn_1_36421 Lactuca sativa
Lsat_1_v5_gn_1_44701 Lactuca sativa
Lsat_1_v5_gn_4_95921 Lactuca sativa
Lsat_1_v5_gn_5_53240 Lactuca sativa
Manes.04G137700 Manihot esculenta
Manes.11G028700 Manihot esculenta
Mapoly0134s0030 Marchantia polymorpha
MBI04_g06225_MAGBIO Magnolia biondii
MCO05G115 Micromonas commoda
MD09G1195900 Malus domestica
MD17G1176500 Malus domestica
Medtr8g015660 Medicago truncatula
MELO3C019176.2 Cucumis melo
MELO3C024402.2 Cucumis melo
Migut.I01003 Erythranthe guttata
MSTRG.22603 Avicennia marina
Nitab4.5_0003218g0070 Nicotiana tabacum
Nitab4.5_0006642g0010 Nicotiana tabacum
Nn8g38926 Nelumbo nucifera
Oeu002520.1 Olea europaea
Oeu039979.1 Olea europaea
Os01g0550100 Oryza sativa ssp. japonica
Peaxi162Scf00177g00215 Petunia axillaris
PGR102G0116 Punica granatum
Phvul.010G141700 Phaseolus vulgaris
Potri.001G197400 Populus trichocarpa
Potri.003G033700 Populus trichocarpa
Pp3c11_21370 Physcomitrium patens
Pp3c7_7460 Physcomitrium patens
PRCOL_00000017 Prasinoderma coloniale
Prupe.3G052400 Prunus persica
Psat4g193640 Pisum sativum
PSO013G0267 Papaver somniferum
PSO063G2767 Papaver somniferum
PSO832G1047 Papaver somniferum
PSO832G2035 Papaver somniferum
QL05p015273 Quercus lobata
QL05p015866 Quercus lobata
RcHm_v2.0_Chr2g0142531 Rosa chinensis
Rhsim12G0192600 Rhododendron simsii
Rhsim12G0204700 Rhododendron simsii
Sabra01G0156400 Salix brachista
Sabra03G0029500 Salix brachista
SalBow6G0444 Salvia bowleyana
Sc12g0009850 Simmondsia chinensis
Sed0015232 Sechium edule
Sed0015765 Sechium edule
SEGI_22647 Sequoiadendron giganteum
SGA_v2.0_scaffold45G16993 Striga asiatica
SGA_v2.0_scaffold71G23744 Striga asiatica
SMO307G0086 Selaginella moellendorffii
Solyc12g044740.2 Solanum lycopersicum
Sopen12g022890 Solanum pennellii
Sp1g38350 Schrenkiella parvula
Sp3g19320 Schrenkiella parvula
TAR626G0060 Trochodendron aralioides
THA.LOC104805917 Tarenaya hassleriana
THA.LOC104817933 Tarenaya hassleriana
Thecc.06G108100 Theobroma cacao
Thhalv10011383m.g Eutrema salsugineum
Thhalv10020636m.g Eutrema salsugineum
TPR.G24219 Trifolium pratense
TWI79G1365 Tripterygium wilfordii
unitig_37.g12991 Utricularia gibba
unitig_37.g12992 Utricularia gibba
vmacro16995 Vaccinium macrocarpon
VMungo0331G1129 Vigna mungo
Zm00001eb162410 Zea mays
Zm00001eb356540 Zea mays

User provided reference genes

Program Settings