Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p08840 Brassica napus
A10p21150 Brassica napus
Aa31LG11G11210 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2915 Anthoceros agrestis
Actinidia12239 Actinidia chinensis
Actinidia12240 Actinidia chinensis
Actinidia14359 Actinidia chinensis
Actinidia20627 Actinidia chinensis
Actinidia30855 Actinidia chinensis
Ah.02g118090 Amaranthus hybridus
Ah.06g188310 Amaranthus hybridus
AL6G29670 Arabidopsis lyrata
Aqoxy5G01862 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5Q2P9B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EZQ64B Arachis hypogaea
AT5G18420 Arabidopsis thaliana
ATR1089G159 Amborella trichopoda
Atru.chr3.1437 Acer truncatum
AUR62000581 Chenopodium quinoa
AUR62006937 Chenopodium quinoa
BcaB08g36680 Brassica carinata
BcaC04g18693 Brassica carinata
BcaNung06869 Brassica carinata
BolC3t13514H Brassica oleracea
BolC9t58691H Brassica oleracea
BraA03t10211Z Brassica rapa
BraA03t15035Z Brassica rapa
BraA07t29344Z Brassica rapa
BraA10t44178Z Brassica rapa
C03p10330 Brassica napus
C09p58260 Brassica napus
CAN.G10.8 Capsicum annuum
CANSAT54G0087 Cannabis sativa
CARHR194600 Cardamine hirsuta
Carub.0006s1668 Capsella rubella
Ca_12160_v3 Cicer arietinum L.
CBR_g22449 Chara braunii
Cc07_g20480 Coffea canephora
Cc07_g20520 Coffea canephora
Cc07_g20530 Coffea canephora
Cc07_g20540 Coffea canephora
Cc07_g20580 Coffea canephora
CDE05G2224 Ceratophyllum demersum
CDE05G3168 Ceratophyllum demersum
Ciclev10005092m.g Citrus clementina
Ciclev10006318m.g Citrus clementina
CiPaw.15G186100 Carya illinoinensis
ClCG02G000230 Citrullus lanatus
Cpa.g.sc138.54 Carica papaya
Cpa.g.sc138.55 Carica papaya
Cre17.g726800 Chlamydomonas reinhardtii
CsaV3_2G019600 Cucumis sativus L.
CSS0025733 Camellia sinensis var. sinensis
DCAR_009624 Daucus carota
DCAR_015558 Daucus carota
DCAR_019944 Daucus carota
Dinv19127 Davidia involucrata
Dinv26833 Davidia involucrata
Duzib147G1077 Durio zibethinus
Duzib187G0370 Durio zibethinus
Duzib264G1318 Durio zibethinus
ECA238G2948 Erigeron canadensis
EL10Ac4g09708 Beta vulgaris
Eucgr.I00032 Eucalyptus grandis
Eucgr.I00085 Eucalyptus grandis
FAN04G0350 Fragaria x ananassa
FAN08G1522 Fragaria x ananassa
FAN13G1241 Fragaria x ananassa
FAN18G2241 Fragaria x ananassa
FvH4_5g20280 Fragaria vesca
Glyma.02G005000 Glycine max
Glyma.10G003500 Glycine max
Gohir.A10G084900 Gossypium hirsutum
Gohir.D10G106700 Gossypium hirsutum
Gorai.011G116800 Gossypium raimondii
GSVIVG01000257001 Vitis vinifera
HanXRQChr13g0402671 Helianthus annuus
Haze_19373 Corylus avellana
Haze_27454 Corylus avellana
Hma1.2p1_0513F.1_g169610 Hydrangea macrophylla
Hma1.2p1_3052F.1_g332140 Hydrangea macrophylla
HPP92_005635 Vanilla planifolia
HPP92_005645 Vanilla planifolia
HPP92_005646 Vanilla planifolia
HPP92_005678 Vanilla planifolia
HPP92_005679 Vanilla planifolia
HPP92_005680 Vanilla planifolia
Hund07194 Selenicereus undatus
Lalb_Chr01g0020921 Lupinus albus
Lalb_Chr03g0037441 Lupinus albus
Lalb_Chr19g0127941 Lupinus albus
Lj4A823T24 Lonicera japonica
Lj6g0017875 Lotus japonicus
Lju41A56G29 Lonicera japonica
Lju41A56T30 Lonicera japonica
Lsat_1_v5_gn_0_9061 Lactuca sativa
Lsat_1_v5_gn_2_19540 Lactuca sativa
Lsat_1_v5_gn_5_118080 Lactuca sativa
Manes.13G154600 Manihot esculenta
Mapoly0005s0018 Marchantia polymorpha
MBI06_g32154_MAGBIO Magnolia biondii
MBI10_g20270_MAGBIO Magnolia biondii
MCO14G229 Micromonas commoda
MD04G1052500 Malus domestica
MD06G1047700 Malus domestica
Medtr1g041405 Medicago truncatula
MELO3C023211.2 Cucumis melo
Migut.D01135 Erythranthe guttata
MSTRG.4671 Avicennia marina
MSTRG.9397 Avicennia marina
Nitab4.5_0000064g0090 Nicotiana tabacum
Nitab4.5_0000064g0100 Nicotiana tabacum
Nitab4.5_0005261g0010 Nicotiana tabacum
Nitab4.5_0005261g0020 Nicotiana tabacum
Nn5g27391 Nelumbo nucifera
Oeu034405.1 Olea europaea
Oeu036288.1 Olea europaea
Oeu046377.1 Olea europaea
Os11g0240900 Oryza sativa ssp. japonica
Os12g0197900 Oryza sativa ssp. japonica
Peaxi162Scf00621g00412 Petunia axillaris
Peaxi162Scf00621g00413 Petunia axillaris
PGR119G2008 Punica granatum
PGSC0003DMG401004242 Solanum tuberosum
PGSC0003DMG402004242 Solanum tuberosum
Phvul.007G277800 Phaseolus vulgaris
Potri.004G092400 Populus trichocarpa
Potri.017G122600 Populus trichocarpa
Pp3c20_12330 Physcomitrium patens
Pp3c23_1780 Physcomitrium patens
Pp3c24_6950 Physcomitrium patens
PRCOL_00001851 Prasinoderma coloniale
Prupe.5G058000 Prunus persica
Psat6g104000 Pisum sativum
PSO210G3799 Papaver somniferum
PSO761G0211 Papaver somniferum
PSO761G0569 Papaver somniferum
QL10p034885 Quercus lobata
QL10p034897 Quercus lobata
QL10p034900 Quercus lobata
RcHm_v2.0_Chr7g0205341 Rosa chinensis
Rhsim01G0147700 Rhododendron simsii
Sabra04G0062100 Salix brachista
Sabra17G0101400 Salix brachista
Sabra17G0104000 Salix brachista
SalBow1G0131 Salvia bowleyana
Sc16g0009950 Simmondsia chinensis
Sed0016932 Sechium edule
SEGI_14103 Sequoiadendron giganteum
SGA_v2.0_scaffold14G07064 Striga asiatica
SHI03101 Sapria himalayana
SHI03102 Sapria himalayana
SHI03103 Sapria himalayana
SMO196G0070 Selaginella moellendorffii
Solyc04g024500.3 Solanum lycopersicum
Solyc04g024510.3 Solanum lycopersicum
Sopen04g017040 Solanum pennellii
Sp6g25900 Schrenkiella parvula
TAR376G0099 Trochodendron aralioides
TAR628G1247 Trochodendron aralioides
THA.LOC104799828 Tarenaya hassleriana
THA.LOC104806688 Tarenaya hassleriana
Thecc.01G145600 Theobroma cacao
Thhalv10013606m.g Eutrema salsugineum
TPR.G25177 Trifolium pratense
TPR.G34339 Trifolium pratense
TWI31G0701 Tripterygium wilfordii
TWI79G0644 Tripterygium wilfordii
unitig_0.g354 Utricularia gibba
vmacro21003 Vaccinium macrocarpon
VMungo0720G3057 Vigna mungo
Zm00001eb112220 Zea mays
Zm00001eb138450 Zea mays
Zm00001eb167940 Zea mays

User provided reference genes

Program Settings