Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p01530 Brassica napus
A09p12310 Brassica napus
A09p12320 Brassica napus
Aa31LG8G16300 Aethionema arabicum
Actinidia27131 Actinidia chinensis
Actinidia29951 Actinidia chinensis
Actinidia38494 Actinidia chinensis
AL3G49030 Arabidopsis lyrata
Aqoxy7G02806 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.K74ZDU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M9AABA Arachis hypogaea
AT2G19260 Arabidopsis thaliana
ATR0626G364 Amborella trichopoda
ATR0681G357 Amborella trichopoda
Atru.chr7.2670 Acer truncatum
Atru.chr7.755 Acer truncatum
Atru.chr7.776 Acer truncatum
AUR62027455 Chenopodium quinoa
AUR62031249 Chenopodium quinoa
BcaB03g16715 Brassica carinata
BcaB07g31614 Brassica carinata
BcaC04g22860 Brassica carinata
BcaC06g36543 Brassica carinata
BolC7t40703H Brassica oleracea
BolC9t54356H Brassica oleracea
BraA07t27954Z Brassica rapa
BraA09t36876Z Brassica rapa
C07p03110 Brassica napus
C09p14530 Brassica napus
CAN.G79.26 Capsicum annuum
CARHR109720 Cardamine hirsuta
Carub.0003s3349 Capsella rubella
Carub.0003s3352 Capsella rubella
Ca_15280_v3 Cicer arietinum L.
Cc00_g03720 Coffea canephora
Cc06_g20850 Coffea canephora
CDE02G3353 Ceratophyllum demersum
CDE06G2299 Ceratophyllum demersum
Cfa013453 Carpinus fangiana
Cfa020674 Carpinus fangiana
Cfa020676 Carpinus fangiana
Ciclev10008331m.g Citrus clementina
Ciclev10010423m.g Citrus clementina
CiPaw.07G197100 Carya illinoinensis
CiPaw.08G032500 Carya illinoinensis
CiPaw.15G150400 Carya illinoinensis
ClCG06G013610 Citrullus lanatus
COL.COLO4_03948 Corchorus olitorius
COL.COLO4_05448 Corchorus olitorius
COL.COLO4_07402 Corchorus olitorius
COL.COLO4_08265 Corchorus olitorius
COL.COLO4_08503 Corchorus olitorius
COL.COLO4_10384 Corchorus olitorius
COL.COLO4_11596 Corchorus olitorius
COL.COLO4_12828 Corchorus olitorius
COL.COLO4_19860 Corchorus olitorius
COL.COLO4_20072 Corchorus olitorius
COL.COLO4_21275 Corchorus olitorius
COL.COLO4_23946 Corchorus olitorius
COL.COLO4_24355 Corchorus olitorius
COL.COLO4_36419 Corchorus olitorius
CsaV3_1G031880 Cucumis sativus L.
CSS0017119 Camellia sinensis var. sinensis
CSS0024594 Camellia sinensis var. sinensis
DCAR_014666 Daucus carota
DCAR_018034 Daucus carota
DCAR_020148 Daucus carota
Dinv41175 Davidia involucrata
Duzib106G1697 Durio zibethinus
Duzib114G0910 Durio zibethinus
ECA234G1030 Erigeron canadensis
ECA240G0372 Erigeron canadensis
EL10Ac8g19270 Beta vulgaris
Eucgr.C02221 Eucalyptus grandis
FAN04G0885 Fragaria x ananassa
FAN08G2100 Fragaria x ananassa
FAN13G0118 Fragaria x ananassa
FAN13G0316 Fragaria x ananassa
FAN18G0538 Fragaria x ananassa
FAN18G4269 Fragaria x ananassa
FvH4_5g18011 Fragaria vesca
FvH4_5g27730 Fragaria vesca
Glyma.04G001900 Glycine max
Glyma.06G001400 Glycine max
Gohir.A06G176100 Gossypium hirsutum
Gohir.A10G181100 Gossypium hirsutum
Gohir.D06G185700 Gossypium hirsutum
Gohir.D10G188000 Gossypium hirsutum
Gorai.010G217300 Gossypium raimondii
Gorai.011G210800 Gossypium raimondii
GSVIVG01010859001 Vitis vinifera
GSVIVG01035550001 Vitis vinifera
HanXRQChr09g0244721 Helianthus annuus
Haze_18974 Corylus avellana
Haze_18980 Corylus avellana
Haze_22020 Corylus avellana
Hma1.2p1_1326F.1_g275830 Hydrangea macrophylla
HPP92_010790 Vanilla planifolia
Hund06701 Selenicereus undatus
Lalb_Chr11g0061221 Lupinus albus
Lj1g0014223 Lotus japonicus
Lsat_1_v5_gn_7_51121 Lactuca sativa
Manes.03G002401 Manihot esculenta
Manes.06G019800 Manihot esculenta
Mapoly0046s0104 Marchantia polymorpha
MBI13_g34042_MAGBIO Magnolia biondii
MBI16_g05835_MAGBIO Magnolia biondii
MBI16_g10833_MAGBIO Magnolia biondii
MD06G1235600 Malus domestica
MD13G1241700 Malus domestica
MD16G1248600 Malus domestica
Medtr3g100350 Medicago truncatula
MELO3C017428.2 Cucumis melo
Migut.J00798 Erythranthe guttata
Migut.L01882 Erythranthe guttata
MSTRG.10441 Avicennia marina
MSTRG.10442 Avicennia marina
MSTRG.26544 Avicennia marina
Nitab4.5_0001225g0140 Nicotiana tabacum
Nitab4.5_0001583g0100 Nicotiana tabacum
Nn8g40781 Nelumbo nucifera
Oeu064556.1 Olea europaea
Os04g0425100 Oryza sativa ssp. japonica
Peaxi162Scf00670g00347 Petunia axillaris
PGR044G2313 Punica granatum
PGSC0003DMG400021118 Solanum tuberosum
Phvul.007G142700 Phaseolus vulgaris
Phvul.009G117100 Phaseolus vulgaris
Phvul.009G117400 Phaseolus vulgaris
Potri.006G075400 Populus trichocarpa
Potri.006G277400 Populus trichocarpa
Potri.018G142201 Populus trichocarpa
Potri.018G142300 Populus trichocarpa
Prupe.1G075400 Prunus persica
Prupe.5G240400 Prunus persica
Psat5g048320 Pisum sativum
PSO170G0656 Papaver somniferum
RcHm_v2.0_Chr7g0177591 Rosa chinensis
RcHm_v2.0_Chr7g0219501 Rosa chinensis
Rhsim03G0266100 Rhododendron simsii
Sabra06G0056100 Salix brachista
Sabra06G0056200 Salix brachista
Sabra06G0056300 Salix brachista
Sabra06G0215100 Salix brachista
Sabra18G0116200 Salix brachista
SalBow5G4070 Salvia bowleyana
Sc08g0004740 Simmondsia chinensis
Sed0001699 Sechium edule
Sed0015737 Sechium edule
SEGI_05476 Sequoiadendron giganteum
SEGI_17596 Sequoiadendron giganteum
SEGI_29375 Sequoiadendron giganteum
SGA_v2.0_scaffold231G43410 Striga asiatica
SMO117G0282 Selaginella moellendorffii
SMO361G0647 Selaginella moellendorffii
Solyc02g069980.4 Solanum lycopersicum
Sopen02g019140 Solanum pennellii
Sp3g32620 Schrenkiella parvula
TAR383G0399 Trochodendron aralioides
TAR625G1146 Trochodendron aralioides
TAR626G1281 Trochodendron aralioides
THA.LOC104814650 Tarenaya hassleriana
Thecc.09G004800 Theobroma cacao
Thecc.10G174600 Theobroma cacao
Thhalv10022602m.g Eutrema salsugineum
TPR.G6349 Trifolium pratense
TWI34G1954 Tripterygium wilfordii
TWI63G1413 Tripterygium wilfordii
unitig_578.g16064 Utricularia gibba
unitig_8.g4939 Utricularia gibba
vmacro05997 Vaccinium macrocarpon
VMungo1309G0585 Vigna mungo
Zm00001eb002000 Zea mays
Zm00001eb274650 Zea mays
Zm00001eb290600 Zea mays

User provided reference genes

Program Settings