Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p26750 Brassica napus
Aa31LG7G9380 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.1912 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2552 Anthoceros agrestis
Actinidia12415 Actinidia chinensis
Actinidia23393 Actinidia chinensis
Actinidia23394 Actinidia chinensis
Ah.02g127910 Amaranthus hybridus
AL1G40240 Arabidopsis lyrata
Aqoxy3G04028 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.374THF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R76IPR Arachis hypogaea
AT1G24706 Arabidopsis thaliana
ATR0021G052 Amborella trichopoda
Atru.chr11.800 Acer truncatum
Atru.chr2.736 Acer truncatum
AUR62014146 Chenopodium quinoa
AUR62038486 Chenopodium quinoa
BcaB03g12045 Brassica carinata
BcaB03g12046 Brassica carinata
BcaB04g17716 Brassica carinata
BcaB05g22549 Brassica carinata
BcaC05g26498 Brassica carinata
BcaC05g26698 Brassica carinata
BolC3t19622H Brassica oleracea
BolC5t31277H Brassica oleracea
BraA08t34620Z Brassica rapa
C03p73260 Brassica napus
C05p25490 Brassica napus
CAN.G206.116 Capsicum annuum
CAN.G71.1 Capsicum annuum
CAN.G71.2 Capsicum annuum
CANSAT78G0669 Cannabis sativa
CARHR026420 Cardamine hirsuta
Carub.0001s2544 Capsella rubella
Ca_17244_v3 Cicer arietinum L.
Ca_29522_v3 Cicer arietinum L.
Ca_30366_v3 Cicer arietinum L.
CBR_g39719 Chara braunii
CDE05G1425 Ceratophyllum demersum
CDE05G1569 Ceratophyllum demersum
CDE05G1820 Ceratophyllum demersum
CDE05G3646 Ceratophyllum demersum
Cfa024658 Carpinus fangiana
Ciclev10014076m.g Citrus clementina
Ciclev10017843m.g Citrus clementina
CiPaw.06G055800 Carya illinoinensis
ClCG01G006690 Citrullus lanatus
COL.COLO4_04150 Corchorus olitorius
COL.COLO4_04151 Corchorus olitorius
COL.COLO4_06656 Corchorus olitorius
Cpa.g.c39725 Carica papaya
Cpa.g.sc2.145 Carica papaya
Cpa.g.sc2.147 Carica papaya
Cpa.g.sc2.149 Carica papaya
Cpa.g.sc2.153 Carica papaya
Cre12.g507700 Chlamydomonas reinhardtii
CsaV3_1G014700 Cucumis sativus L.
CsaV3_5G027880 Cucumis sativus L.
CSS0009129 Camellia sinensis var. sinensis
CSS0026713 Camellia sinensis var. sinensis
CSS0042784 Camellia sinensis var. sinensis
DCAR_026811 Daucus carota
Dinv02645 Davidia involucrata
Dinv11756 Davidia involucrata
Dinv14386 Davidia involucrata
ECA246G1343 Erigeron canadensis
EL10Ac6g14201 Beta vulgaris
Eucgr.B02697 Eucalyptus grandis
FAN07G2130 Fragaria x ananassa
FAN07G2168 Fragaria x ananassa
FAN12G0920 Fragaria x ananassa
FAN17G2354 Fragaria x ananassa
FAN22G0296 Fragaria x ananassa
FvH4_4g33200 Fragaria vesca
Glyma.05G241400 Glycine max
Glyma.08G048400 Glycine max
Gohir.A03G112200 Gossypium hirsutum
Gohir.D02G136766 Gossypium hirsutum
Gohir.D02G136832 Gossypium hirsutum
Gorai.005G152800 Gossypium raimondii
GSVIVG01011619001 Vitis vinifera
HanXRQChr12g0381871 Helianthus annuus
Haze_08333 Corylus avellana
HPP92_004743 Vanilla planifolia
Hund24923 Selenicereus undatus
Lalb_Chr05g0222051 Lupinus albus
Lalb_Chr05g0227571 Lupinus albus
Lalb_Chr16g0387401 Lupinus albus
Lalb_Chr18g0049821 Lupinus albus
Lalb_Chr18g0050041 Lupinus albus
Lj3C862T8 Lonicera japonica
Lj3P862T26 Lonicera japonica
Lj4g0022556 Lotus japonicus
Lsat_1_v5_gn_3_102381 Lactuca sativa
Lsat_1_v5_gn_3_86221 Lactuca sativa
Lsat_1_v5_gn_8_150821 Lactuca sativa
Manes.17G086100 Manihot esculenta
Mapoly0001s0369 Marchantia polymorpha
MBI18_g21002_MAGBIO Magnolia biondii
MCO13G375 Micromonas commoda
MD09G1258800 Malus domestica
Medtr7g117220 Medicago truncatula
Medtr8g106090 Medicago truncatula
MELO3C005265.2 Cucumis melo
Migut.E00504 Erythranthe guttata
MSTRG.2114 Avicennia marina
Nitab4.5_0000011g0120 Nicotiana tabacum
Nitab4.5_0000011g0130 Nicotiana tabacum
Nitab4.5_0000011g0140 Nicotiana tabacum
Nitab4.5_0004735g0030 Nicotiana tabacum
Nitab4.5_0004735g0040 Nicotiana tabacum
Nitab4.5_0004735g0050 Nicotiana tabacum
Nn4g24477 Nelumbo nucifera
Oeu006345.3 Olea europaea
Os01g0916800 Oryza sativa ssp. japonica
Peaxi162Scf00937g00119 Petunia axillaris
PGR142G4089 Punica granatum
Phvul.002G324500 Phaseolus vulgaris
Potri.013G085000 Populus trichocarpa
Potri.019G054600 Populus trichocarpa
Pp3c11_17570 Physcomitrium patens
PRCOL_00006124 Prasinoderma coloniale
Prupe.3G150800 Prunus persica
Psat0s3352g0200 Pisum sativum
Psat7g004480 Pisum sativum
PSO063G2585 Papaver somniferum
PSO782G5475 Papaver somniferum
QL03p038358 Quercus lobata
RcHm_v2.0_Chr2g0110801 Rosa chinensis
RcHm_v2.0_Chr4g0442311 Rosa chinensis
Rhsim04G0125900 Rhododendron simsii
Rhsim04G0143600 Rhododendron simsii
Rhsim04G0143700 Rhododendron simsii
Rhsim04G0143900 Rhododendron simsii
Rhsim09G0087200 Rhododendron simsii
Sabra13G0078400 Salix brachista
Sabra18G0052900 Salix brachista
Sabra18G0053100 Salix brachista
Sabra18G0053300 Salix brachista
Sabra18G0053500 Salix brachista
Sabra18G0053600 Salix brachista
Sabra18G0054000 Salix brachista
Sabra19G0063600 Salix brachista
SalBow2G1878 Salvia bowleyana
Sc14g0006590 Simmondsia chinensis
Sed0003400 Sechium edule
Sed0014719 Sechium edule
SGA_v2.0_scaffold3G01767 Striga asiatica
SHI04403 Sapria himalayana
SHI04405 Sapria himalayana
SHI04409 Sapria himalayana
SHI04410 Sapria himalayana
SMO145G0041 Selaginella moellendorffii
Solyc05g017890.4 Solanum lycopersicum
Sopen05g014610 Solanum pennellii
Sp1g23110 Schrenkiella parvula
TAR371G0322 Trochodendron aralioides
TAR371G1101 Trochodendron aralioides
TAR371G1117 Trochodendron aralioides
TAR629G0821 Trochodendron aralioides
TAR629G2897 Trochodendron aralioides
THA.LOC104807876 Tarenaya hassleriana
THA.LOC104825570 Tarenaya hassleriana
Thecc.02G306600 Theobroma cacao
Thhalv10006540m.g Eutrema salsugineum
TPR.G12867 Trifolium pratense
TPR.G21790 Trifolium pratense
TPR.G39728 Trifolium pratense
TWI74G0603 Tripterygium wilfordii
unitig_8.g4016 Utricularia gibba
VMungo0251G0132 Vigna mungo
VMungo0465G0002 Vigna mungo
VMungo1028G0001 Vigna mungo
Zm00001eb156750 Zea mays

User provided reference genes

Program Settings