Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p37570 Brassica napus
A05p37080 Brassica napus
Aa31LG7G12510 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2961 Anthoceros agrestis
Actinidia09594 Actinidia chinensis
Actinidia33992 Actinidia chinensis
Ah.05g166690 Amaranthus hybridus
AL3G23940 Arabidopsis lyrata
Aqoxy5G03020 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.I0XR4S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q9GEU7 Arachis hypogaea
AT3G12280 Arabidopsis thaliana
ATR0582G127 Amborella trichopoda
Atru.chr12.1306 Acer truncatum
Atru.chr6.2718 Acer truncatum
AUR62033843 Chenopodium quinoa
AUR62035738 Chenopodium quinoa
AUR62041503 Chenopodium quinoa
BcaB04g18687 Brassica carinata
BcaC01g04055 Brassica carinata
BcaC09g48227 Brassica carinata
BolC1t05248H Brassica oleracea
BolC2t11042H Brassica oleracea
BolC3t16833H Brassica oleracea
BolC5t34217H Brassica oleracea
BraA03t12911Z Brassica rapa
BraA05t22505Z Brassica rapa
C01p53050 Brassica napus
C02p49640 Brassica napus
C03p45560 Brassica napus
C05p55510 Brassica napus
CAN.G1588.14 Capsicum annuum
CANSAT56G0684 Cannabis sativa
CARHR086830 Cardamine hirsuta
Carub.0003s1164 Capsella rubella
Ca_23978_v3 Cicer arietinum L.
CBR_g45825 Chara braunii
Cc11_g14880 Coffea canephora
CDE02G2393 Ceratophyllum demersum
CDE02G2628 Ceratophyllum demersum
CDE09G1395 Ceratophyllum demersum
Cfa010949 Carpinus fangiana
Ciclev10000128m.g Citrus clementina
Ciclev10003102m.g Citrus clementina
Ciclev10014630m.g Citrus clementina
CiPaw.06G056400 Carya illinoinensis
CiPaw.14G009300 Carya illinoinensis
ClCG05G026990 Citrullus lanatus
COL.COLO4_20737 Corchorus olitorius
Cpa.g.sc169.40 Carica papaya
Cre06.g255450 Chlamydomonas reinhardtii
CsaV3_5G036930 Cucumis sativus L.
CSS0026343 Camellia sinensis var. sinensis
CSS0046878 Camellia sinensis var. sinensis
DCAR_004259 Daucus carota
DCAR_004260 Daucus carota
DCAR_008196 Daucus carota
Dinv06987 Davidia involucrata
Dinv14623 Davidia involucrata
Duzib106G1228 Durio zibethinus
Duzib114G0684 Durio zibethinus
ECA246G4717 Erigeron canadensis
EL10Ac1g02273 Beta vulgaris
Eucgr.G03211 Eucalyptus grandis
FAN01G0005 Fragaria x ananassa
FAN03G2084 Fragaria x ananassa
FAN06G3123 Fragaria x ananassa
FAN10G3794 Fragaria x ananassa
FvH4_7g03720 Fragaria vesca
Glyma.04G192200 Glycine max
Glyma.13G192400 Glycine max
Glyma.15G230300 Glycine max
Gohir.A05G283400 Gossypium hirsutum
Gohir.A05G399400 Gossypium hirsutum
Gohir.A05G399500 Gossypium hirsutum
Gohir.D04G016400 Gossypium hirsutum
Gohir.D04G016500 Gossypium hirsutum
Gohir.D05G284400 Gossypium hirsutum
Gorai.009G299000 Gossypium raimondii
Gorai.012G019100 Gossypium raimondii
Gorai.012G019200 Gossypium raimondii
GSVIVG01032958001 Vitis vinifera
GSVIVG01035560001 Vitis vinifera
HanXRQChr04g0106401 Helianthus annuus
HanXRQChr06g0175421 Helianthus annuus
Haze_02995 Corylus avellana
Hma1.2p1_0073F.1_g038600 Hydrangea macrophylla
Hma1.2p1_0164F.1_g073080 Hydrangea macrophylla
Hma1.2p1_0468F.1_g158780 Hydrangea macrophylla
HPP92_000321 Vanilla planifolia
Hund13302 Selenicereus undatus
Lalb_Chr03g0032201 Lupinus albus
Lalb_Chr19g0132941 Lupinus albus
Lj1g0022785 Lotus japonicus
Lj3A1077G55 Lonicera japonica
Lj3g0027102 Lotus japonicus
Lsat_1_v5_gn_3_33021 Lactuca sativa
Manes.03G097800 Manihot esculenta
Manes.11G074000 Manihot esculenta
Manes.16G045800 Manihot esculenta
Mapoly0131s0020 Marchantia polymorpha
MBI11_g02479_MAGBIO Magnolia biondii
MBI11_g07996_MAGBIO Magnolia biondii
MCO08G295 Micromonas commoda
MD02G1277700 Malus domestica
MD05G1190300 Malus domestica
MD07G1045800 Malus domestica
Medtr3g006170 Medicago truncatula
Medtr8g040560 Medicago truncatula
MELO3C012492.2 Cucumis melo
Migut.K01127 Erythranthe guttata
MSTRG.444 Avicennia marina
Nitab4.5_0002182g0050 Nicotiana tabacum
Nitab4.5_0008702g0020 Nicotiana tabacum
Nn3g16238 Nelumbo nucifera
Nn4g22094 Nelumbo nucifera
Oeu034276.1 Olea europaea
Os08g0538700 Oryza sativa ssp. japonica
Os11g0533500 Oryza sativa ssp. japonica
Peaxi162Scf00047g01540 Petunia axillaris
PGR031G0564 Punica granatum
PGSC0003DMG400011581 Solanum tuberosum
Phvul.011G201200 Phaseolus vulgaris
Potri.001G031400 Populus trichocarpa
Pp3c15_2800 Physcomitrium patens
Pp3c19_9550 Physcomitrium patens
Pp3c19_9580 Physcomitrium patens
Pp3c19_9596 Physcomitrium patens
Pp3c9_2440 Physcomitrium patens
PRCOL_00001859 Prasinoderma coloniale
Prupe.2G042800 Prunus persica
Prupe.8G086800 Prunus persica
Psat4g145000 Pisum sativum
PSO017G2490 Papaver somniferum
PSO478G2410 Papaver somniferum
PSO478G5179 Papaver somniferum
QL04p021130 Quercus lobata
QL04p021333 Quercus lobata
QL93p0049_0031 Quercus lobata
RcHm_v2.0_Chr1g0326641 Rosa chinensis
Rhsim12G0015900 Rhododendron simsii
Sabra01G0022500 Salix brachista
SalBow1G6973 Salvia bowleyana
SalBow2G0230 Salvia bowleyana
SalBow2G2207 Salvia bowleyana
Sc02g0008490 Simmondsia chinensis
Sed0009106 Sechium edule
Sed0027944 Sechium edule
SEGI_04896 Sequoiadendron giganteum
SEGI_33786 Sequoiadendron giganteum
SEGI_35648 Sequoiadendron giganteum
SGA_v2.0_scaffold81G25979 Striga asiatica
SMO134G0004 Selaginella moellendorffii
SMO141G0281 Selaginella moellendorffii
SMO174G0114 Selaginella moellendorffii
Solyc09g091280.4 Solanum lycopersicum
Sopen09g034250 Solanum pennellii
Sp3g10500 Schrenkiella parvula
TAR622G1067 Trochodendron aralioides
TAR629G1670 Trochodendron aralioides
THA.LOC104799327 Tarenaya hassleriana
THA.LOC104826752 Tarenaya hassleriana
Thecc.10G142800 Theobroma cacao
Thhalv10019977m.g Eutrema salsugineum
TPR.G8543 Trifolium pratense
TWI15G1223 Tripterygium wilfordii
TWI38G1846 Tripterygium wilfordii
unitig_22.g6370 Utricularia gibba
unitig_22.g6371 Utricularia gibba
unitig_26.g10435 Utricularia gibba
vmacro01007 Vaccinium macrocarpon
VMungo1127G0455 Vigna mungo
Zm00001eb037120 Zea mays
Zm00001eb113470 Zea mays
Zm00001eb197990 Zea mays
Zm00001eb198220 Zea mays

User provided reference genes

Program Settings