Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p22530 Brassica napus
A05p15860 Brassica napus
Aa31LG5G6920 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3970 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_26.4 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_287.2 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_295.3 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2434 Anthoceros agrestis
Actinidia25120 Actinidia chinensis
Ah.13g070310 Amaranthus hybridus
AL4G24250 Arabidopsis lyrata
Aqoxy128s009 Aquilegia oxysepala
Aqoxy1G00773 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4A8T0Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6EI814 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DA7VUD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DBQJ9M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X5K85D Arachis hypogaea
AT2G29540 Arabidopsis thaliana
ATR1136G184 Amborella trichopoda
Atru.chr3.4044 Acer truncatum
AUR62001716 Chenopodium quinoa
AUR62020054 Chenopodium quinoa
BcaB02g10260 Brassica carinata
BcaC02g08078 Brassica carinata
BolC4t23659H Brassica oleracea
BraA04t17798Z Brassica rapa
C04p21300 Brassica napus
C04p58680 Brassica napus
CAN.G1186.33 Capsicum annuum
CAN.G696.7 Capsicum annuum
CANSAT54G2674 Cannabis sativa
CARHR122880 Cardamine hirsuta
Carub.0004s1059 Capsella rubella
Cc09_g02060 Coffea canephora
CDE05G2370 Ceratophyllum demersum
CDE05G3507 Ceratophyllum demersum
Cfa011625 Carpinus fangiana
Cfa020872 Carpinus fangiana
Ciclev10029631m.g Citrus clementina
CiPaw.13G084200 Carya illinoinensis
ClCG03G001080 Citrullus lanatus
ClCG03G002440 Citrullus lanatus
COL.COLO4_19069 Corchorus olitorius
Cpa.g.sc112.95 Carica papaya
Cre12.g484100 Chlamydomonas reinhardtii
CsaV3_1G013120 Cucumis sativus L.
CsaV3_1G035860 Cucumis sativus L.
CSS0034778 Camellia sinensis var. sinensis
DCAR_015642 Daucus carota
Dinv06204 Davidia involucrata
Dinv34318 Davidia involucrata
Duzib150G0459 Durio zibethinus
Duzib168G1059 Durio zibethinus
ECA248G2580 Erigeron canadensis
EL10Ac7g16096 Beta vulgaris
Eucgr.G01031 Eucalyptus grandis
Eucgr.G01035 Eucalyptus grandis
Eucgr.G01038 Eucalyptus grandis
FAN01G1905 Fragaria x ananassa
FAN02G2926 Fragaria x ananassa
FAN03G1864 Fragaria x ananassa
FAN05G4346 Fragaria x ananassa
FAN06G2211 Fragaria x ananassa
FAN09G1296 Fragaria x ananassa
FAN10G1677 Fragaria x ananassa
FAN14G2908 Fragaria x ananassa
FvH4_6g26980 Fragaria vesca
FvH4_7g06540 Fragaria vesca
Glyma.18G281100 Glycine max
Glyma.19G045500 Glycine max
Gohir.A03G047300 Gossypium hirsutum
Gohir.A06G083400 Gossypium hirsutum
Gohir.A06G113000 Gossypium hirsutum
Gohir.A06G119302 Gossypium hirsutum
Gohir.A08G112100 Gossypium hirsutum
Gohir.A12G147900 Gossypium hirsutum
Gohir.D02G136950 Gossypium hirsutum
Gohir.D03G119900 Gossypium hirsutum
Gohir.D04G005500 Gossypium hirsutum
Gohir.D04G155200 Gossypium hirsutum
Gohir.D05G283601 Gossypium hirsutum
Gohir.D05G283900 Gossypium hirsutum
Gohir.D07G180600 Gossypium hirsutum
Gohir.D07G180800 Gossypium hirsutum
Gohir.D07G184100 Gossypium hirsutum
Gohir.D09G041300 Gossypium hirsutum
Gohir.D09G041350 Gossypium hirsutum
Gohir.D11G224100 Gossypium hirsutum
Gorai.001G172100 Gossypium raimondii
Gorai.003G126400 Gossypium raimondii
Gorai.004G180400 Gossypium raimondii
Gorai.006G047400 Gossypium raimondii
Gorai.008G072300 Gossypium raimondii
Gorai.009G298400 Gossypium raimondii
Gorai.011G189400 Gossypium raimondii
GSVIVG01024830001 Vitis vinifera
HanXRQChr09g0262301 Helianthus annuus
Haze_19301 Corylus avellana
Haze_24228 Corylus avellana
Hma1.2p1_0274F.1_g110300 Hydrangea macrophylla
Hma1.2p1_0543F.1_g175312 Hydrangea macrophylla
Hma1.2p1_0543F.1_g175340 Hydrangea macrophylla
HPP92_011695 Vanilla planifolia
Hund03162 Selenicereus undatus
Hund04903 Selenicereus undatus
Lalb_Chr21g0317731 Lupinus albus
Lalb_Chr21g0317911 Lupinus albus
Lj1g0022776 Lotus japonicus
Lj6g0017568 Lotus japonicus
Lsat_1_v5_gn_5_168181 Lactuca sativa
Manes.01G166500 Manihot esculenta
Mapoly0064s0065 Marchantia polymorpha
Mapoly0079s0034 Marchantia polymorpha
MBI04_g47172_MAGBIO Magnolia biondii
MCO07G039 Micromonas commoda
MD10G1078400 Malus domestica
Medtr7g020830 Medicago truncatula
Migut.M00943 Erythranthe guttata
MSTRG.7467 Avicennia marina
Nitab4.5_0000880g0090 Nicotiana tabacum
Nitab4.5_0002142g0080 Nicotiana tabacum
Nitab4.5_0002405g0070 Nicotiana tabacum
Nn2g13557 Nelumbo nucifera
Oeu001049.1 Olea europaea
Oeu042438.1 Olea europaea
Os11g0218100 Oryza sativa ssp. japonica
Os11g0218200 Oryza sativa ssp. japonica
Os12g0194700 Oryza sativa ssp. japonica
Peaxi162Scf00025g01315 Petunia axillaris
Peaxi162Scf00123g01014 Petunia axillaris
PGR102G1512 Punica granatum
PGSC0003DMG400013346 Solanum tuberosum
PGSC0003DMG400020825 Solanum tuberosum
Phvul.001G016450 Phaseolus vulgaris
Phvul.004G063100 Phaseolus vulgaris
Phvul.008G020000 Phaseolus vulgaris
Potri.001G246600 Populus trichocarpa
Pp3c3_11180 Physcomitrium patens
PRCOL_00001819 Prasinoderma coloniale
Prupe.2G047700 Prunus persica
Prupe.3G125300 Prunus persica
Psat3g190320 Pisum sativum
PSO339G2392 Papaver somniferum
PSO384G4465 Papaver somniferum
QL01p028911 Quercus lobata
RcHm_v2.0_Chr1g0334971 Rosa chinensis
RcHm_v2.0_Chr2g0128821 Rosa chinensis
Rhsim13G0075300 Rhododendron simsii
Sabra16G0149700 Salix brachista
SalBow1G5086 Salvia bowleyana
SalBow8G2167 Salvia bowleyana
SalBow8G3221 Salvia bowleyana
Sc12g0001080 Simmondsia chinensis
Sed0019378 Sechium edule
Sed0025309 Sechium edule
SEGI_41348 Sequoiadendron giganteum
SGA_v2.0_scaffold44G16545 Striga asiatica
SMO228G0103 Selaginella moellendorffii
SMO351G0643 Selaginella moellendorffii
Solyc11g012195.1 Solanum lycopersicum
Sopen06g001840 Solanum pennellii
Sopen11g006990 Solanum pennellii
Sp4g12270 Schrenkiella parvula
TAR369G1135 Trochodendron aralioides
TAR623G0256 Trochodendron aralioides
THA.LOC104800713 Tarenaya hassleriana
Thecc.09G309300 Theobroma cacao
Thhalv10017434m.g Eutrema salsugineum
TPR.G3298 Trifolium pratense
TPR.G4479 Trifolium pratense
TWI75G1138 Tripterygium wilfordii
TWI79G0904 Tripterygium wilfordii
unitig_92.g28151 Utricularia gibba
vmacro03011 Vaccinium macrocarpon
Zm00001eb169140 Zea mays

User provided reference genes

Program Settings