Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p14340 Brassica napus
Aa31LG2G1860 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2544 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.2926 Anthoceros agrestis
Actinidia03936 Actinidia chinensis
Actinidia37803 Actinidia chinensis
AL8G30470 Arabidopsis lyrata
Aqoxy1G00539 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.045CRL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DJK1GU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.F7GYSS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NAY1Y6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y4106G Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZT0L0Q Arachis hypogaea
AT5G55000 Arabidopsis thaliana
ATR0697G272 Amborella trichopoda
Atru.chr2.1469 Acer truncatum
AUR62018910 Chenopodium quinoa
AUR62027738 Chenopodium quinoa
AUR62043941 Chenopodium quinoa
BcaC01g06335 Brassica carinata
BcaC01g06337 Brassica carinata
BolC3t14092H Brassica oleracea
BraA03t10731Z Brassica rapa
C03p16720 Brassica napus
CAN.G959.52 Capsicum annuum
CANSAT78G2379 Cannabis sativa
CANSAT78G2427 Cannabis sativa
CARHR268340 Cardamine hirsuta
Carub.0008s1529 Capsella rubella
Ca_25687_v3 Cicer arietinum L.
CBR_g23172 Chara braunii
Cc06_g17190 Coffea canephora
CDE06G0557 Ceratophyllum demersum
CDE07G1488 Ceratophyllum demersum
Cfa017695 Carpinus fangiana
Ciclev10021370m.g Citrus clementina
CiPaw.10G125600 Carya illinoinensis
ClCG04G005440 Citrullus lanatus
COL.COLO4_28614 Corchorus olitorius
Cpa.g.sc161.15 Carica papaya
Cre13.g579017 Chlamydomonas reinhardtii
Cre13.g585250 Chlamydomonas reinhardtii
Cre16.g679876 Chlamydomonas reinhardtii
CsaV3_4G012140 Cucumis sativus L.
CSS0011085 Camellia sinensis var. sinensis
CSS0049440 Camellia sinensis var. sinensis
DCAR_016963 Daucus carota
Dinv05569 Davidia involucrata
Dinv25063 Davidia involucrata
Duzib177G0442 Durio zibethinus
ECA248G3680 Erigeron canadensis
EL10Ac1g01242 Beta vulgaris
Eucgr.A02129 Eucalyptus grandis
FAN05G4552 Fragaria x ananassa
FAN11G2374 Fragaria x ananassa
FAN11G3220 Fragaria x ananassa
FAN11G3501 Fragaria x ananassa
FAN12G1843 Fragaria x ananassa
FAN13G1636 Fragaria x ananassa
FAN13G2151 Fragaria x ananassa
FAN13G2987 Fragaria x ananassa
FAN14G0610 Fragaria x ananassa
FAN16G1886 Fragaria x ananassa
FAN17G2887 Fragaria x ananassa
FAN19G2544 Fragaria x ananassa
FAN21G2807 Fragaria x ananassa
FAN23G1412 Fragaria x ananassa
FAN25G1848 Fragaria x ananassa
FAN28G2715 Fragaria x ananassa
FvH4_1g28440 Fragaria vesca
FvH4_3g41240 Fragaria vesca
FvH4_3g41490 Fragaria vesca
FvH4_3g41510 Fragaria vesca
FvH4_4g13720 Fragaria vesca
FvH4_6g31590 Fragaria vesca
Glyma.05G089400 Glycine max
Gohir.A07G127733 Gossypium hirsutum
Gohir.A08G219522 Gossypium hirsutum
Gohir.A08G219600 Gossypium hirsutum
Gohir.A13G164200 Gossypium hirsutum
Gohir.D08G236500 Gossypium hirsutum
Gohir.D13G167037 Gossypium hirsutum
Gorai.004G251700 Gossypium raimondii
Gorai.013G195400 Gossypium raimondii
GSVIVG01029976001 Vitis vinifera
HanXRQChr01g0026431 Helianthus annuus
HanXRQChr11g0347951 Helianthus annuus
HanXRQChr11g0347961 Helianthus annuus
HanXRQChr11g0347971 Helianthus annuus
HanXRQChr11g0347981 Helianthus annuus
HanXRQChr11g0347991 Helianthus annuus
HanXRQChr11g0348001 Helianthus annuus
HanXRQChr11g0348201 Helianthus annuus
HanXRQChr11g0348211 Helianthus annuus
HanXRQChr11g0348221 Helianthus annuus
HanXRQChr11g0348261 Helianthus annuus
HanXRQChr11g0348271 Helianthus annuus
HanXRQChr11g0348281 Helianthus annuus
HanXRQChr11g0348521 Helianthus annuus
Haze_20442 Corylus avellana
Hma1.2p1_2382F.1_g321070 Hydrangea macrophylla
HPP92_027838 Vanilla planifolia
Lalb_Chr06g0174111 Lupinus albus
Lj1A1064G32 Lonicera japonica
Lsat_1_v5_gn_1_56021 Lactuca sativa
Lsat_1_v5_gn_9_112501 Lactuca sativa
Manes.08G154400 Manihot esculenta
Manes.09G138000 Manihot esculenta
Mapoly0001s0409 Marchantia polymorpha
MD03G1035600 Malus domestica
MD03G1043700 Malus domestica
MD03G1043800 Malus domestica
MD03G1043900 Malus domestica
MD03G1044000 Malus domestica
MD03G1047000 Malus domestica
MD11G1047200 Malus domestica
MD12G1008500 Malus domestica
MD14G1005800 Malus domestica
Medtr6g027790 Medicago truncatula
MELO3C008816.2 Cucumis melo
Migut.J00770 Erythranthe guttata
MSTRG.10428 Avicennia marina
MSTRG.26559 Avicennia marina
Nitab4.5_0000121g0060 Nicotiana tabacum
Nitab4.5_0002131g0010 Nicotiana tabacum
Nn6g32388 Nelumbo nucifera
Os03g0157500 Oryza sativa ssp. japonica
Os10g0438000 Oryza sativa ssp. japonica
Phvul.004G074000 Phaseolus vulgaris
Potri.013G062500 Populus trichocarpa
Potri.019G038400 Populus trichocarpa
Pp3c17_20390 Physcomitrium patens
Pp3c19_20680 Physcomitrium patens
Pp3c19_3550 Physcomitrium patens
Pp3c22_3970 Physcomitrium patens
Pp3c22_8490 Physcomitrium patens
Pp3c22_8500 Physcomitrium patens
Pp3c22_8540 Physcomitrium patens
Pp3c3_29270 Physcomitrium patens
Pp3c8_19020 Physcomitrium patens
Prupe.4G018000 Prunus persica
Prupe.6G036000 Prunus persica
Prupe.7G009900 Prunus persica
Psat1g090600 Pisum sativum
PSO339G3097 Papaver somniferum
PSO384G0364 Papaver somniferum
QL07p017761 Quercus lobata
RcHm_v2.0_Chr3g0496431 Rosa chinensis
RcHm_v2.0_Chr5g0074441 Rosa chinensis
RcHm_v2.0_Chr5g0074451 Rosa chinensis
RcHm_v2.0_Chr5g0074461 Rosa chinensis
Rhsim03G0052400 Rhododendron simsii
Sabra13G0055700 Salix brachista
Sabra19G0049600 Salix brachista
SalBow3G0657 Salvia bowleyana
Sc07g0007800 Simmondsia chinensis
Sed0018840 Sechium edule
SEGI_15476 Sequoiadendron giganteum
SEGI_22625 Sequoiadendron giganteum
SEGI_36015 Sequoiadendron giganteum
SGA_v2.0_scaffold31G12791 Striga asiatica
SMO239G0197 Selaginella moellendorffii
SMO356G0208 Selaginella moellendorffii
Solyc10g076860.2 Solanum lycopersicum
Sopen10g028540 Solanum pennellii
Sp6g16940 Schrenkiella parvula
TAR623G1392 Trochodendron aralioides
THA.LOC104821454 Tarenaya hassleriana
Thecc.05G244400 Theobroma cacao
Thhalv10014237m.g Eutrema salsugineum
TPR.G29869 Trifolium pratense
TWI60G1471 Tripterygium wilfordii
unitig_899.g15193 Utricularia gibba
vmacro07558 Vaccinium macrocarpon
VMungo0464G0013 Vigna mungo
Zm00001eb403220 Zea mays

User provided reference genes

Program Settings