Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p20900 Brassica napus
A05p31370 Brassica napus
Aa31LG10G4780 Aethionema arabicum
Aa31LG8G5140 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2497 Anthoceros agrestis
Actinidia02661 Actinidia chinensis
Actinidia19834 Actinidia chinensis
Ah.15g090400 Amaranthus hybridus
AL1G55480 Arabidopsis lyrata
AL3G31520 Arabidopsis lyrata
Aqoxy3G00241 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.2TSU5I Arachis hypogaea
AT1G48760 Arabidopsis thaliana
ATR1125G015 Amborella trichopoda
Atru.chr9.882 Acer truncatum
AUR62029899 Chenopodium quinoa
AUR62033807 Chenopodium quinoa
BcaC03g15768 Brassica carinata
BcaC05g27555 Brassica carinata
BolC2t09524H Brassica oleracea
BolC5t33475H Brassica oleracea
BraA05t20995Z Brassica rapa
BraA05t21975Z Brassica rapa
C02p35100 Brassica napus
C05p35390 Brassica napus
C05p47670 Brassica napus
CAN.G1129.1 Capsicum annuum
CAN.G1425.25 Capsicum annuum
CANSAT80G1256 Cannabis sativa
CARHR038730 Cardamine hirsuta
CARHR093630 Cardamine hirsuta
Carub.0001s3791 Capsella rubella
Carub.0003s1806 Capsella rubella
Ca_25458_v3 Cicer arietinum L.
Ca_25459_v3 Cicer arietinum L.
Ca_28055_v3 Cicer arietinum L.
CBR_g44606 Chara braunii
Cc04_g07000 Coffea canephora
CDE04G1035 Ceratophyllum demersum
Cfa019749 Carpinus fangiana
Ciclev10018705m.g Citrus clementina
CiPaw.16G051800 Carya illinoinensis
CiPaw.16G088000 Carya illinoinensis
ClCG00G001070 Citrullus lanatus
ClCG04G011000 Citrullus lanatus
COL.COLO4_05244 Corchorus olitorius
Cpa.g.sc3.486 Carica papaya
CsaV3_1G006710 Cucumis sativus L.
CSS0042498 Camellia sinensis var. sinensis
DCAR_023214 Daucus carota
Dinv15697 Davidia involucrata
Dinv28123 Davidia involucrata
Duzib068G1360 Durio zibethinus
Duzib084G0756 Durio zibethinus
Duzib205G0965 Durio zibethinus
ECA233G2967 Erigeron canadensis
EL10Ac4g08652 Beta vulgaris
Eucgr.K02232 Eucalyptus grandis
FAN01G2153 Fragaria x ananassa
FAN01G2725 Fragaria x ananassa
FAN02G0702 Fragaria x ananassa
FAN02G2434 Fragaria x ananassa
FAN03G2941 Fragaria x ananassa
FAN04G0052 Fragaria x ananassa
FAN04G0282 Fragaria x ananassa
FAN04G1981 Fragaria x ananassa
FAN05G1192 Fragaria x ananassa
FAN05G4607 Fragaria x ananassa
FAN06G3234 Fragaria x ananassa
FAN08G0705 Fragaria x ananassa
FAN10G1023 Fragaria x ananassa
FAN12G3315 Fragaria x ananassa
FAN13G0119 Fragaria x ananassa
FAN13G0494 Fragaria x ananassa
FAN13G3114 Fragaria x ananassa
FAN14G2461 Fragaria x ananassa
FAN15G0613 Fragaria x ananassa
FAN15G0737 Fragaria x ananassa
FAN15G1605 Fragaria x ananassa
FAN16G3240 Fragaria x ananassa
FAN17G0835 Fragaria x ananassa
FAN18G2650 Fragaria x ananassa
FAN18G3471 Fragaria x ananassa
FAN18G4049 Fragaria x ananassa
FAN19G0479 Fragaria x ananassa
FAN19G2454 Fragaria x ananassa
FAN19G3046 Fragaria x ananassa
FAN19G3228 Fragaria x ananassa
FAN22G1342 Fragaria x ananassa
FAN22G1480 Fragaria x ananassa
FAN22G1762 Fragaria x ananassa
FAN22G1848 Fragaria x ananassa
FAN23G1773 Fragaria x ananassa
FAN23G3050 Fragaria x ananassa
FAN26G1271 Fragaria x ananassa
FAN28G0445 Fragaria x ananassa
FAN28G1941 Fragaria x ananassa
FvH4_2g13381 Fragaria vesca
FvH4_3g34152 Fragaria vesca
FvH4_5g11850 Fragaria vesca
FvH4_7g24551 Fragaria vesca
Glyma.05G237400 Glycine max
Glyma.08G044600 Glycine max
Gohir.A12G266900 Gossypium hirsutum
Gohir.D12G267400 Gossypium hirsutum
Gorai.008G287400 Gossypium raimondii
GSVIVG01008318001 Vitis vinifera
HanXRQChr17g0558301 Helianthus annuus
Haze_18702 Corylus avellana
HPP92_023134 Vanilla planifolia
Hund10276 Selenicereus undatus
Lalb_Chr22g0353161 Lupinus albus
Lalb_Chr24g0397881 Lupinus albus
Lj5A151T51 Lonicera japonica
Lj6g0007940 Lotus japonicus
Lsat_1_v5_gn_7_14180 Lactuca sativa
Lsat_1_v5_gn_8_145181 Lactuca sativa
Manes.05G124730 Manihot esculenta
Mapoly0001s0514 Marchantia polymorpha
MBI16_g28239_MAGBIO Magnolia biondii
MBI16_g33212_MAGBIO Magnolia biondii
MBI16_g33214_MAGBIO Magnolia biondii
MCO13G008 Micromonas commoda
MD06G1218100 Malus domestica
MD14G1228200 Malus domestica
Medtr8g104380 Medicago truncatula
MELO3C002096.2 Cucumis melo
Migut.I00406 Erythranthe guttata
Nitab4.5_0003433g0050 Nicotiana tabacum
Nitab4.5_0008233g0010 Nicotiana tabacum
Nn6g34767 Nelumbo nucifera
Oeu000995.1 Olea europaea
Oeu000997.1 Olea europaea
Os01g0512200 Oryza sativa ssp. japonica
Peaxi162Scf00683g00003 Petunia axillaris
PGR044G0175 Punica granatum
PGSC0003DMG400005647 Solanum tuberosum
Phvul.002G317900 Phaseolus vulgaris
Potri.012G055000 Populus trichocarpa
Potri.015G045600 Populus trichocarpa
Pp3c5_28670 Physcomitrium patens
PRCOL_00004580 Prasinoderma coloniale
Prupe.5G223200 Prunus persica
Psat7g010840 Pisum sativum
PSO017G5964 Papaver somniferum
PSO478G2973 Papaver somniferum
QL10p025782 Quercus lobata
RcHm_v2.0_Chr7g0185741 Rosa chinensis
Rhsim08G0131700 Rhododendron simsii
Sabra12G0038700 Salix brachista
Sabra15G0040100 Salix brachista
Sc04g0003430 Simmondsia chinensis
Sed0024950 Sechium edule
Sed0028203 Sechium edule
SEGI_04687 Sequoiadendron giganteum
SEGI_11458 Sequoiadendron giganteum
SGA_v2.0_scaffold25G10975 Striga asiatica
SHI26956 Sapria himalayana
SMO367G0105 Selaginella moellendorffii
Solyc03g119270.1 Solanum lycopersicum
Sopen03g038150 Solanum pennellii
Sp1g35680 Schrenkiella parvula
Sp3g16410 Schrenkiella parvula
TAR371G0905 Trochodendron aralioides
TAR629G1514 Trochodendron aralioides
TAR629G1872 Trochodendron aralioides
THA.LOC104820383 Tarenaya hassleriana
Thecc.03G037800 Theobroma cacao
Thhalv10020046m.g Eutrema salsugineum
TPR.G32710 Trifolium pratense
TWI15G0374 Tripterygium wilfordii
TWI81G1044 Tripterygium wilfordii
vmacro17703 Vaccinium macrocarpon
VMungo0251G0737 Vigna mungo
VMungo1127G1783 Vigna mungo
Zm00001eb137140 Zea mays
Zm00001eb410080 Zea mays

User provided reference genes

Program Settings