Gene: AT1G48760

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G48760
  • Transcript Identifier AT1G48760.2
  • Gene Type Coding gene
  • Location Chr1 : 18036652-18039261 : negative

Gene Family Information

  • ID HOM05D003928
  • #Genes/#Species 177/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G48760.2
  • symbol delta-ADR
  • Alias PAT4,PROTEIN-AFFECTED TRAFFICKING 4
  • uniprot Q9C744

Descriptions

  • Description delta-adaptin
  • Computational description delta-adaptin (delta-ADR); FUNCTIONS IN: protein transporter activity, clathrin binding, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport, protein transport; LOCATED IN: membrane coat, Golgi apparatus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024), Adaptor protein complex AP-3, delta subunit (InterPro:IPR017105), Clathrin/coatomer adaptor, adaptin-like, N-terminal (InterPro:IPR002553); BEST Arabidopsis thaliana protein match is: Adaptor protein complex AP-1, gamma subunit (TAIR:AT1G60070.1); Has 3854 Blast hits to 3636 proteins in 331 species: Archae - 0; Bacteria - 22; Metazoa - 1599; Fungi - 800; Plants - 408; Viruses - 0; Other Eukaryotes - 1025 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0006886
IEA
GOA Databaseintracellular protein transport
GO:0006886
IMP
Gene Ontologyintracellular protein transport1
GO:0006886
IEA
InterProintracellular protein transport
GO:0015031
IEA
GOA Databaseprotein transport
GO:0015031
IEA
InterProprotein transport
GO:0006623
IBA
Gene Ontologyprotein targeting to vacuole2
GO:0006896
IBA
Gene OntologyGolgi to vacuole transport2
GO:0006903
IEP
Gene Ontologyvesicle targeting3
GO:1990019
IMP
Gene Ontologyprotein storage vacuole organization1
GO:0080171
IMP
Gene Ontologylytic vacuole organization1
GO:0007032
IMP
Gene Ontologyendosome organization1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000139
IEA
GOA DatabaseGolgi membrane
GO:0030117
IEA
GOA Databasemembrane coat
GO:0030117
IEA
InterPromembrane coat
GO:0030123
IEA
GOA DatabaseAP-3 adaptor complex
GO:0030123
IBA
Gene OntologyAP-3 adaptor complex2
GO:0030123
IEA
InterProAP-3 adaptor complex
GO:0016020
IEA
GOA Databasemembrane
GO:0005794
IEA
GOA DatabaseGolgi apparatus
GO:0005794
IDA
ISM
Gene OntologyGolgi apparatus3
GO:0005737
IEA
GOA Databasecytoplasm
GO:0010008
IBA
Gene Ontologyendosome membrane2
GO:0005634
HDA
Gene Ontologynucleus5

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011989 Armadillo-like helical
IPR017105 Adaptor protein complex AP-3, delta subunit
IPR002553 Clathrin/coatomer adaptor, adaptin-like, N-terminal
IPR016024 Armadillo-type fold
Mapman id Description
22.3.1.4.1 Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.AP-3 cargo adaptor complex.large subunit delta (AP3D)