Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p32500 Brassica napus
A03p42870 Brassica napus
A05p26040 Brassica napus
Aa31LG5G22190 Aethionema arabicum
Aa31LG5G22200 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1082 Anthoceros agrestis
Actinidia13554 Actinidia chinensis
Actinidia25037 Actinidia chinensis
Actinidia31394 Actinidia chinensis
Actinidia39598 Actinidia chinensis
Ah.06g188070 Amaranthus hybridus
Ah.06g188080 Amaranthus hybridus
Ah.06g188100 Amaranthus hybridus
Ah.06g188120 Amaranthus hybridus
Ah.06g188140 Amaranthus hybridus
Ah.06g188150 Amaranthus hybridus
AL3G36960 Arabidopsis lyrata
Aqoxy1G01610 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HSUB65 Arachis hypogaea
AT3G22660 Arabidopsis thaliana
ATR0564G120 Amborella trichopoda
ATR0626G386 Amborella trichopoda
Atru.chr1.637 Acer truncatum
AUR62000393 Chenopodium quinoa
AUR62006749 Chenopodium quinoa
BcaB04g19210 Brassica carinata
BcaB04g20506 Brassica carinata
BcaB06g26378 Brassica carinata
BcaC01g03432 Brassica carinata
BcaC05g28029 Brassica carinata
BcaC09g49188 Brassica carinata
BcaC09g49189 Brassica carinata
BolC1t04121H Brassica oleracea
BolC3t17533H Brassica oleracea
BolC5t32786H Brassica oleracea
BraA01t03380Z Brassica rapa
BraA03t13433Z Brassica rapa
BraA05t21488Z Brassica rapa
C01p41660 Brassica napus
C03p52650 Brassica napus
CAN.G140.50 Capsicum annuum
CANSAT11G2317 Cannabis sativa
CARHR098540 Cardamine hirsuta
Carub.0003s2281 Capsella rubella
Ca_20760_v3 Cicer arietinum L.
Ca_25165_v3 Cicer arietinum L.
Ca_27419_v3 Cicer arietinum L.
Ca_29708_v3 Cicer arietinum L.
Ca_31306_v3 Cicer arietinum L.
Cc02_g03920 Coffea canephora
CDE04G0151 Ceratophyllum demersum
CDE07G0272 Ceratophyllum demersum
CDE08G0595 Ceratophyllum demersum
Cfa018157 Carpinus fangiana
Ciclev10005521m.g Citrus clementina
Ciclev10006627m.g Citrus clementina
CiPaw.15G078700 Carya illinoinensis
ClCG01G005120 Citrullus lanatus
COL.COLO4_14179 Corchorus olitorius
Cpa.g.sc3.273 Carica papaya
Cre07.g351750 Chlamydomonas reinhardtii
CsaV3_5G005400 Cucumis sativus L.
CSS0011813 Camellia sinensis var. sinensis
CSS0023430 Camellia sinensis var. sinensis
CSS0049059 Camellia sinensis var. sinensis
DCAR_013591 Daucus carota
DCAR_018123 Daucus carota
DCAR_020219 Daucus carota
Dinv10307 Davidia involucrata
Dinv22928 Davidia involucrata
Dinv22984 Davidia involucrata
Duzib084G0641 Durio zibethinus
ECA233G5254 Erigeron canadensis
ECA234G0656 Erigeron canadensis
EL10Ac4g09457 Beta vulgaris
Eucgr.E01709 Eucalyptus grandis
Eucgr.K01460 Eucalyptus grandis
FAN01G0440 Fragaria x ananassa
FAN03G1144 Fragaria x ananassa
FAN03G3435 Fragaria x ananassa
FAN06G2146 Fragaria x ananassa
FAN06G4038 Fragaria x ananassa
FAN10G0556 Fragaria x ananassa
FAN10G0634 Fragaria x ananassa
FvH4_7g28160 Fragaria vesca
Glyma.10G154500 Glycine max
Glyma.20G233800 Glycine max
Gohir.A07G039500 Gossypium hirsutum
Gohir.D07G043600 Gossypium hirsutum
Gohir.D12G264333 Gossypium hirsutum
Gorai.001G046600 Gossypium raimondii
Gorai.008G283700 Gossypium raimondii
GSVIVG01018514001 Vitis vinifera
HanXRQChr05g0141401 Helianthus annuus
HanXRQChr08g0224051 Helianthus annuus
Haze_17961 Corylus avellana
Hma1.2p1_0654F.1_g196410 Hydrangea macrophylla
HPP92_008700 Vanilla planifolia
Hund09280 Selenicereus undatus
Hund09282 Selenicereus undatus
Lalb_Chr06g0167921 Lupinus albus
Lalb_Chr10g0096111 Lupinus albus
Lalb_Chr17g0338581 Lupinus albus
Lj1P984T37 Lonicera japonica
Lj3g0006890 Lotus japonicus
Lsat_1_v5_gn_6_96180 Lactuca sativa
Manes.06G137800 Manihot esculenta
Mapoly0140s0011 Marchantia polymorpha
MBI05_g15474_MAGBIO Magnolia biondii
MCO16G303 Micromonas commoda
MD01G1185600 Malus domestica
MD07G1257700 Malus domestica
Medtr5g028350 Medicago truncatula
Medtr8g075400 Medicago truncatula
MELO3C005417.2 Cucumis melo
Migut.J00413 Erythranthe guttata
MSTRG.14093 Avicennia marina
MSTRG.14095 Avicennia marina
MSTRG.5717 Avicennia marina
Nitab4.5_0000249g0460 Nicotiana tabacum
Nitab4.5_0001620g0040 Nicotiana tabacum
Nitab4.5_0004389g0020 Nicotiana tabacum
Nitab4.5_0005477g0070 Nicotiana tabacum
Nn1g01220 Nelumbo nucifera
Nn1g08099 Nelumbo nucifera
Nn4g26401 Nelumbo nucifera
Nn4g26407 Nelumbo nucifera
Oeu019920.1 Olea europaea
Oeu019922.1 Olea europaea
Oeu021724.1 Olea europaea
Oeu023230.1 Olea europaea
Oeu039213.1 Olea europaea
Os07g0475800 Oryza sativa ssp. japonica
Peaxi162Scf00441g00013 Petunia axillaris
PGR042G0045 Punica granatum
PGSC0003DMG400032141 Solanum tuberosum
PGSC0003DMG400032192 Solanum tuberosum
Phvul.007G180200 Phaseolus vulgaris
Phvul.007G264700 Phaseolus vulgaris
Potri.015G131200 Populus trichocarpa
Pp3c6_25210 Physcomitrium patens
PRCOL_00003036 Prasinoderma coloniale
Prupe.2G115300 Prunus persica
Prupe.2G115400 Prunus persica
Prupe.2G282000 Prunus persica
Psat2g139240 Pisum sativum
PSO478G1412 Papaver somniferum
PSO782G4293 Papaver somniferum
QL02p008779 Quercus lobata
RcHm_v2.0_Chr1g0375101 Rosa chinensis
RcHm_v2.0_Chr5g0027461 Rosa chinensis
Rhsim07G0193400 Rhododendron simsii
Rhsim11G0028600 Rhododendron simsii
Rhsim11G0028700 Rhododendron simsii
Sc03g0002240 Simmondsia chinensis
Sed0011284 Sechium edule
Sed0026547 Sechium edule
SGA_v2.0_scaffold126G33894 Striga asiatica
SHI13875 Sapria himalayana
SMO174G0035 Selaginella moellendorffii
Solyc01g006090.3 Solanum lycopersicum
Solyc01g006170.4 Solanum lycopersicum
Sopen01g002090 Solanum pennellii
Sopen01g002180 Solanum pennellii
Sp3g20420 Schrenkiella parvula
TAR626G1747 Trochodendron aralioides
TAR636G2246 Trochodendron aralioides
THA.LOC104808294 Tarenaya hassleriana
Thecc.03G161300 Theobroma cacao
Thhalv10021245m.g Eutrema salsugineum
TPR.G27266 Trifolium pratense
TWI14G0513 Tripterygium wilfordii
TWI23G0331 Tripterygium wilfordii
unitig_744.g24672 Utricularia gibba
vmacro18851 Vaccinium macrocarpon
VMungo0720G1998 Vigna mungo
Zm00001eb104900 Zea mays
Zm00001eb235000 Zea mays

User provided reference genes

Program Settings