Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p11140 Brassica napus
A09p61550 Brassica napus
Aa31LG1G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.388 Anthoceros agrestis
Actinidia14940 Actinidia chinensis
Actinidia15239 Actinidia chinensis
Actinidia36692 Actinidia chinensis
Ah.16g102720 Amaranthus hybridus
AL1G27200 Arabidopsis lyrata
Aqoxy3G00152 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.GYNY95 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N6SBJA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QBU7FE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VWEF5F Arachis hypogaea
AT1G15130 Arabidopsis thaliana
ATR0584G007 Amborella trichopoda
ATR0602G154 Amborella trichopoda
Atru.chr11.357 Acer truncatum
AUR62014128 Chenopodium quinoa
AUR62039549 Chenopodium quinoa
BcaB02g06581 Brassica carinata
BcaB03g14554 Brassica carinata
BcaB03g14559 Brassica carinata
BcaC05g25444 Brassica carinata
BcaNung05516 Brassica carinata
BolC5t30063H Brassica oleracea
BolC5t34148H Brassica oleracea
BolC8t52062H Brassica oleracea
BraA04t18760Z Brassica rapa
BraA06t24294Z Brassica rapa
BraA09t41528Z Brassica rapa
C05p13260 Brassica napus
C08p45140 Brassica napus
CAN.G1489.5 Capsicum annuum
CAN.G822.7 Capsicum annuum
CANSAT01G1493 Cannabis sativa
CARHR015650 Cardamine hirsuta
Carub.0001s1490 Capsella rubella
Ca_23695_v3 Cicer arietinum L.
CBR_g20272 Chara braunii
Cc11_g09150 Coffea canephora
CDE04G1728 Ceratophyllum demersum
CDE04G2900 Ceratophyllum demersum
CDE04G3131 Ceratophyllum demersum
CDE04G3287 Ceratophyllum demersum
CDE07G0047 Ceratophyllum demersum
CDE07G1200 Ceratophyllum demersum
CDE07G1409 Ceratophyllum demersum
CDE08G0110 Ceratophyllum demersum
CDE08G0886 Ceratophyllum demersum
Cfa015793 Carpinus fangiana
Cfa022433 Carpinus fangiana
Ciclev10014287m.g Citrus clementina
CiPaw.05G246300 Carya illinoinensis
CiPaw.06G014300 Carya illinoinensis
ClCG01G006040 Citrullus lanatus
COL.COLO4_10968 Corchorus olitorius
Cpa.g.sc65.100 Carica papaya
Cre01.g004350 Chlamydomonas reinhardtii
CsaV3_5G028640 Cucumis sativus L.
CSS0002048 Camellia sinensis var. sinensis
CSS0020493 Camellia sinensis var. sinensis
DCAR_023457 Daucus carota
DCAR_023618 Daucus carota
Dinv04890 Davidia involucrata
Dinv16173 Davidia involucrata
Duzib268G1062 Durio zibethinus
ECA233G2027 Erigeron canadensis
ECA234G0471 Erigeron canadensis
ECA234G1408 Erigeron canadensis
EL10Ac4g09588 Beta vulgaris
EL10Ac6g14256 Beta vulgaris
Eucgr.B02881 Eucalyptus grandis
FAN07G0165 Fragaria x ananassa
FAN07G1894 Fragaria x ananassa
FAN12G1256 Fragaria x ananassa
FAN12G3131 Fragaria x ananassa
FAN17G0190 Fragaria x ananassa
FAN22G1865 Fragaria x ananassa
FvH4_4g26260 Fragaria vesca
Glyma.10G266600 Glycine max
Glyma.20G124000 Glycine max
Gohir.A03G148400 Gossypium hirsutum
Gohir.D02G171500 Gossypium hirsutum
Gorai.005G192900 Gossypium raimondii
GSVIVG01011794001 Vitis vinifera
HanXRQChr02g0041951 Helianthus annuus
HanXRQChr12g0377711 Helianthus annuus
HanXRQChr17g0567071 Helianthus annuus
Haze_00700 Corylus avellana
Hma1.2p1_0000F.1_g000200 Hydrangea macrophylla
Hma1.2p1_0114F.1_g055400 Hydrangea macrophylla
Hma1.2p1_0374F.1_g138500 Hydrangea macrophylla
Hma1.2p1_1699F.1_g298160 Hydrangea macrophylla
Hma1.2p1_2029F.1_g311720 Hydrangea macrophylla
Hma1.2p1_2029F.1_g311730 Hydrangea macrophylla
Hma1.2p1_2619F.1_g325550 Hydrangea macrophylla
HPP92_013139 Vanilla planifolia
Hund25010 Selenicereus undatus
Lalb_Chr02g0145581 Lupinus albus
Lalb_Chr17g0338751 Lupinus albus
Lalb_Chr21g0308571 Lupinus albus
Lj3A876T45 Lonicera japonica
Lj5g0011385 Lotus japonicus
Lsat_1_v5_gn_3_54921 Lactuca sativa
Lsat_1_v5_gn_4_15461 Lactuca sativa
Lsat_1_v5_gn_8_41561 Lactuca sativa
Manes.06G062600 Manihot esculenta
Manes.14G136300 Manihot esculenta
Mapoly0004s0114 Marchantia polymorpha
MBI06_g17215_MAGBIO Magnolia biondii
MCO15G191 Micromonas commoda
MD13G1031100 Malus domestica
MD16G1033300 Malus domestica
Medtr1g108690 Medicago truncatula
MELO3C005328.2 Cucumis melo
Migut.E00398 Erythranthe guttata
MSTRG.2194 Avicennia marina
MSTRG.878 Avicennia marina
Nitab4.5_0000350g0210 Nicotiana tabacum
Nitab4.5_0001648g0010 Nicotiana tabacum
Nitab4.5_0004524g0020 Nicotiana tabacum
Nitab4.5_0010188g0010 Nicotiana tabacum
Nn4g24048 Nelumbo nucifera
Oeu062877.3 Olea europaea
Oeu064205.1 Olea europaea
Os02g0638400 Oryza sativa ssp. japonica
Os10g0495300 Oryza sativa ssp. japonica
Os10g0495433 Oryza sativa ssp. japonica
Peaxi162Scf00119g01313 Petunia axillaris
Peaxi162Scf00205g00924 Petunia axillaris
PGR102G1971 Punica granatum
PGSC0003DMG400030558 Solanum tuberosum
Phvul.007G035300 Phaseolus vulgaris
Potri.008G126900 Populus trichocarpa
Potri.010G116400 Populus trichocarpa
Pp3c24_13730 Physcomitrium patens
Pp3c8_14930 Physcomitrium patens
PRCOL_00001562 Prasinoderma coloniale
Prupe.1G321000 Prunus persica
Psat6g222920 Pisum sativum
PSO017G5384 Papaver somniferum
PSO478G0832 Papaver somniferum
QL01p002786 Quercus lobata
QL03p031079 Quercus lobata
QL03p031464 Quercus lobata
RcHm_v2.0_Chr1g0317241 Rosa chinensis
RcHm_v2.0_Chr4g0433861 Rosa chinensis
Rhsim09G0101400 Rhododendron simsii
Sabra08G0095800 Salix brachista
SalBow8G1489 Salvia bowleyana
SalBow8G4927 Salvia bowleyana
Sc11g0003990 Simmondsia chinensis
Sed0026980 Sechium edule
SEGI_09716 Sequoiadendron giganteum
SGA_v2.0_scaffold170G38822 Striga asiatica
SGA_v2.0_scaffold376G50293 Striga asiatica
SMO141G0055 Selaginella moellendorffii
Solyc04g007560.3 Solanum lycopersicum
Solyc05g008430.4 Solanum lycopersicum
Sopen04g002640 Solanum pennellii
Sopen05g004260 Solanum pennellii
Sp1g13470 Schrenkiella parvula
TAR622G1410 Trochodendron aralioides
TAR629G0282 Trochodendron aralioides
TAR629G0727 Trochodendron aralioides
THA.LOC104805047 Tarenaya hassleriana
THA.LOC104824160 Tarenaya hassleriana
Thecc.02G217200 Theobroma cacao
Thhalv10006787m.g Eutrema salsugineum
TPR.G4868 Trifolium pratense
TWI31G1382 Tripterygium wilfordii
unitig_27.g25261 Utricularia gibba
unitig_699.g19528 Utricularia gibba
vmacro10621 Vaccinium macrocarpon
vmacro22078 Vaccinium macrocarpon
VMungo0720G3117 Vigna mungo
Zm00001eb044760 Zea mays
Zm00001eb221160 Zea mays
Zm00001eb248370 Zea mays

User provided reference genes

Program Settings