Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p34480 Brassica napus
Aa31sc536G20 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1822 Anthoceros agrestis
Ah.02g131240 Amaranthus hybridus
AL2G26960 Arabidopsis lyrata
Aqoxy6G01037 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0AB4R7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1LH17Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2AK3X2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.35E9MG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.36Q8NS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3E5CY6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.45U5GW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.62N7D7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6IM5NS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6NWB5V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ANFG2H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FHB42U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HCE13Z Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I9RBIQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MA62LX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QY8RSF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.THT645 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UYUS3H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X5KGN6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XXVP91 Arachis hypogaea
AT1G67960 Arabidopsis thaliana
ATR0021G013 Amborella trichopoda
Atru.chr11.806 Acer truncatum
Atru.chr7.2694 Acer truncatum
AUR62033051 Chenopodium quinoa
AUR62042201 Chenopodium quinoa
BcaB03g15147 Brassica carinata
BcaB03g15387 Brassica carinata
BcaC08g46015 Brassica carinata
BcaC08g46221 Brassica carinata
BolC6t38907H Brassica oleracea
BolC6t39223H Brassica oleracea
C01p04020 Brassica napus
C06p38100 Brassica napus
C06p42030 Brassica napus
CAN.G17.4 Capsicum annuum
CAN.G2032.2 Capsicum annuum
CAN.G676.1 Capsicum annuum
CANSAT78G2203 Cannabis sativa
CARHR060610 Cardamine hirsuta
CARHR182750 Cardamine hirsuta
Carub.0002s1445 Capsella rubella
Ca_16122_v3 Cicer arietinum L.
Ca_18504_v3 Cicer arietinum L.
Ca_18505_v3 Cicer arietinum L.
Cc11_g06410 Coffea canephora
Cfa015051 Carpinus fangiana
Cfa025144 Carpinus fangiana
Ciclev10014689m.g Citrus clementina
CiPaw.05G187900 Carya illinoinensis
ClCG11G007570 Citrullus lanatus
COL.COLO4_27608 Corchorus olitorius
Cpa.g.sc2.157 Carica papaya
Cpa.g.sc2.159 Carica papaya
Cre02.g091000 Chlamydomonas reinhardtii
CsaV3_7G022080 Cucumis sativus L.
CSS0003774 Camellia sinensis var. sinensis
CSS0006660 Camellia sinensis var. sinensis
CSS0042804 Camellia sinensis var. sinensis
DCAR_023556 Daucus carota
DCAR_030293 Daucus carota
Dinv02294 Davidia involucrata
Dinv32673 Davidia involucrata
Duzib251G0897 Durio zibethinus
Duzib268G0198 Durio zibethinus
ECA246G1487 Erigeron canadensis
EL10Ac8g19453 Beta vulgaris
Eucgr.G02079 Eucalyptus grandis
FAN07G2679 Fragaria x ananassa
FAN12G1258 Fragaria x ananassa
FAN17G2261 Fragaria x ananassa
FAN22G0514 Fragaria x ananassa
FvH4_4g33240 Fragaria vesca
Glyma.04G189300 Glycine max
Glyma.05G159500 Glycine max
Glyma.06G176300 Glycine max
Glyma.07G191900 Glycine max
Glyma.13G184600 Glycine max
Gohir.A12G154400 Gossypium hirsutum
Gohir.A13G027900 Gossypium hirsutum
Gohir.D12G157600 Gossypium hirsutum
Gohir.D13G026700 Gossypium hirsutum
Gohir.D13G133800 Gossypium hirsutum
Gorai.008G170400 Gossypium raimondii
Gorai.010G152700 Gossypium raimondii
Gorai.013G030000 Gossypium raimondii
Gorai.013G150200 Gossypium raimondii
GSVIVG01011621001 Vitis vinifera
HanXRQChr15g0473541 Helianthus annuus
HanXRQChr15g0473551 Helianthus annuus
Haze_10840 Corylus avellana
Hma1.2p1_0658F.1_g197210 Hydrangea macrophylla
Hma1.2p1_1450F.1_g284160 Hydrangea macrophylla
Hma1.2p1_2859F.1_g329510 Hydrangea macrophylla
HPP92_020596 Vanilla planifolia
Hund15725 Selenicereus undatus
Lalb_Chr11g0070001 Lupinus albus
Lalb_Chr23g0273371 Lupinus albus
Lalb_Chr23g0273381 Lupinus albus
Lj1g0024673 Lotus japonicus
Lj6A734G74 Lonicera japonica
Lsat_1_v5_gn_3_104360 Lactuca sativa
Manes.15G136900 Manihot esculenta
Manes.17G086000 Manihot esculenta
Mapoly0019s0007 Marchantia polymorpha
MBI11_g36366_MAGBIO Magnolia biondii
MCO03G489 Micromonas commoda
MD13G1017500 Malus domestica
MD13G1017700 Malus domestica
MD16G1015700 Malus domestica
Medtr3g076570 Medicago truncatula
Medtr4g090465 Medicago truncatula
MELO3C013236.2 Cucumis melo
Migut.E00502 Erythranthe guttata
Nitab4.5_0001227g0030 Nicotiana tabacum
Nitab4.5_0001516g0010 Nicotiana tabacum
Nn3g18432 Nelumbo nucifera
Nn4g24475 Nelumbo nucifera
Nn6g35150 Nelumbo nucifera
Nn6g35438 Nelumbo nucifera
Nn6g35439 Nelumbo nucifera
Nn8g39028 Nelumbo nucifera
Oeu036124.4 Olea europaea
Oeu043972.2 Olea europaea
Os03g0715332 Oryza sativa ssp. japonica
Os03g0715400 Oryza sativa ssp. japonica
Peaxi162Scf00825g00423 Petunia axillaris
Peaxi162Scf00825g00424 Petunia axillaris
PGR142G3191 Punica granatum
Phvul.002G223900 Phaseolus vulgaris
Phvul.009G172600 Phaseolus vulgaris
Potri.010G103400 Populus trichocarpa
Pp3c12_1050 Physcomitrium patens
PRCOL_00001721 Prasinoderma coloniale
Prupe.1G335900 Prunus persica
Psat5g116920 Pisum sativum
Psat7g111040 Pisum sativum
PSO063G7099 Papaver somniferum
PSO782G5172 Papaver somniferum
QL03p038287 Quercus lobata
RcHm_v2.0_Chr2g0114371 Rosa chinensis
RcHm_v2.0_Chr4g0390701 Rosa chinensis
RcHm_v2.0_Chr4g0442391 Rosa chinensis
RcHm_v2.0_Chr5g0078431 Rosa chinensis
RcHm_v2.0_Chr6g0287871 Rosa chinensis
Sabra10G0076000 Salix brachista
SalBow2G2298 Salvia bowleyana
Sc10g0004870 Simmondsia chinensis
Sc10g0004880 Simmondsia chinensis
Sed0017171 Sechium edule
SEGI_35804 Sequoiadendron giganteum
SGA_v2.0_scaffold23G10153 Striga asiatica
SHI04351 Sapria himalayana
SHI04354 Sapria himalayana
SMO200G0209 Selaginella moellendorffii
SMO278G0031 Selaginella moellendorffii
SMO358G0292 Selaginella moellendorffii
Solyc06g051440.4 Solanum lycopersicum
Sopen06g017410 Solanum pennellii
Sp5g22940 Schrenkiella parvula
TAR374G0617 Trochodendron aralioides
TAR622G1236 Trochodendron aralioides
Thecc.02G307000 Theobroma cacao
Thhalv10018303m.g Eutrema salsugineum
TPR.G24606 Trifolium pratense
TPR.G32436 Trifolium pratense
TPR.G35600 Trifolium pratense
TWI74G0623 Tripterygium wilfordii
unitig_8.g4015 Utricularia gibba
VMungo0251G2034 Vigna mungo
VMungo1309G0617 Vigna mungo
Zm00001eb175210 Zea mays
Zm00001eb216180 Zea mays
Zm00001eb237940 Zea mays
Zm00001eb410650 Zea mays

User provided reference genes

Program Settings