Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p03980 Brassica napus
A03p62930 Brassica napus
A08p16790 Brassica napus
Aa31LG2G16080 Aethionema arabicum
Aa31LG8G13600 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1530 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4483__4484 Anthoceros agrestis
Actinidia00520 Actinidia chinensis
Actinidia17819 Actinidia chinensis
Actinidia27900 Actinidia chinensis
Ah.01g006230 Amaranthus hybridus
Ah.01g019430 Amaranthus hybridus
AL7G16770 Arabidopsis lyrata
Aqoxy2G01755 Aquilegia oxysepala
Aqoxy5G01652 Aquilegia oxysepala
Aqoxy6G01089 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.53VILX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BV32DL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NCS46Q Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NG5KDE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SA4SRM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VS3LYX Arachis hypogaea
AT4G34460 Arabidopsis thaliana
ATR0733G256 Amborella trichopoda
Atru.chr5.3006 Acer truncatum
AUR62011330 Chenopodium quinoa
AUR62016731 Chenopodium quinoa
BcaB03g11831 Brassica carinata
BcaC01g00904 Brassica carinata
BcaNung07194 Brassica carinata
BolC1t00419H Brassica oleracea
BolC3t20866H Brassica oleracea
BolC7t46489H Brassica oleracea
BraA01t00386Z Brassica rapa
BraA03t15368Z Brassica rapa
BraA08t33644Z Brassica rapa
C01p04290 Brassica napus
C03p85750 Brassica napus
C07p60600 Brassica napus
CANSAT01G0308 Cannabis sativa
CARHR242280 Cardamine hirsuta
Carub.0007s0584 Capsella rubella
Ca_15370_v3 Cicer arietinum L.
Ca_15371_v3 Cicer arietinum L.
CBR_g12176 Chara braunii
CBR_g64686 Chara braunii
Cc02_g17630 Coffea canephora
CDE04G3403 Ceratophyllum demersum
Cfa005010 Carpinus fangiana
Ciclev10028655m.g Citrus clementina
CiPaw.05G063800 Carya illinoinensis
CiPaw.06G135900 Carya illinoinensis
ClCG02G005070 Citrullus lanatus
COL.COLO4_25921 Corchorus olitorius
Cpa.g.sc62.142 Carica papaya
CsaV3_7G023510 Cucumis sativus L.
CSS0004129 Camellia sinensis var. sinensis
CSS0007779 Camellia sinensis var. sinensis
DCAR_001583 Daucus carota
DCAR_022117 Daucus carota
DCAR_032251 Daucus carota
Dinv23528 Davidia involucrata
Dinv23529 Davidia involucrata
Duzib052G0149 Durio zibethinus
Duzib132G1223 Durio zibethinus
Duzib248G1446 Durio zibethinus
ECA234G4263 Erigeron canadensis
ECA236G1671 Erigeron canadensis
ECA236G2533 Erigeron canadensis
ECA236G2764 Erigeron canadensis
EL10Ac9g21730 Beta vulgaris
Eucgr.I01264 Eucalyptus grandis
FAN24G2385 Fragaria x ananassa
FvH4_2g08680 Fragaria vesca
Glyma.04G013100 Glycine max
Glyma.06G013000 Glycine max
Glyma.11G118500 Glycine max
Glyma.12G043900 Glycine max
Gohir.A03G194000 Gossypium hirsutum
Gohir.A13G034700 Gossypium hirsutum
Gohir.D02G215100 Gossypium hirsutum
Gohir.D13G033100 Gossypium hirsutum
Gorai.005G243000 Gossypium raimondii
Gorai.013G037500 Gossypium raimondii
GSVIVG01031958001 Vitis vinifera
HanXRQChr04g0127971 Helianthus annuus
HanXRQChr04g0127981 Helianthus annuus
HanXRQChr10g0307211 Helianthus annuus
HanXRQChr13g0410191 Helianthus annuus
Haze_02378 Corylus avellana
Haze_04609 Corylus avellana
Haze_08896 Corylus avellana
Haze_19084 Corylus avellana
Haze_23716 Corylus avellana
Haze_26968 Corylus avellana
Haze_27314 Corylus avellana
Haze_27785 Corylus avellana
Hma1.2p1_0066F.1_g036470 Hydrangea macrophylla
Hma1.2p1_1375F.1_g279040 Hydrangea macrophylla
HPP92_013924 Vanilla planifolia
HPP92_014010 Vanilla planifolia
Hund06228 Selenicereus undatus
Lalb_Chr00c44g0412631 Lupinus albus
Lalb_Chr00c44g0412641 Lupinus albus
Lalb_Chr03g0025731 Lupinus albus
Lalb_Chr08g0246621 Lupinus albus
Lj1g0010946 Lotus japonicus
Lj3g0027765 Lotus japonicus
Lj9A369G66 Lonicera japonica
Lsat_1_v5_gn_5_118640 Lactuca sativa
Lsat_1_v5_gn_7_89161 Lactuca sativa
Manes.15G164000 Manihot esculenta
Manes.17G100500 Manihot esculenta
Mapoly0056s0121 Marchantia polymorpha
MBI16_g36555_MAGBIO Magnolia biondii
MD05G1067400 Malus domestica
MD10G1077300 Malus domestica
Medtr3g116500 Medicago truncatula
MELO3C012527.2 Cucumis melo
Migut.B00242 Erythranthe guttata
MSTRG.16803 Avicennia marina
MSTRG.20087 Avicennia marina
Nitab4.5_0000215g0100 Nicotiana tabacum
Nitab4.5_0000308g0050 Nicotiana tabacum
Nitab4.5_0000557g0030 Nicotiana tabacum
Nitab4.5_0004172g0080 Nicotiana tabacum
Nn1g05027 Nelumbo nucifera
Nn5g29575 Nelumbo nucifera
Oeu015983.1 Olea europaea
Os03g0669200 Oryza sativa ssp. japonica
Peaxi162Scf00684g00320 Petunia axillaris
PGR142G3944 Punica granatum
PGSC0003DMG401000722 Solanum tuberosum
Phvul.011G045900 Phaseolus vulgaris
Potri.004G153700 Populus trichocarpa
Potri.009G115300 Populus trichocarpa
Pp3c1_35990 Physcomitrium patens
Pp3c2_6210 Physcomitrium patens
Prupe.8G098100 Prunus persica
Psat5g006200 Pisum sativum
PSO210G2500 Papaver somniferum
PSO541G0822 Papaver somniferum
PSO675G6008 Papaver somniferum
PSO731G0103 Papaver somniferum
QL11p043433 Quercus lobata
RcHm_v2.0_Chr6g0264111 Rosa chinensis
Rhsim05G0074800 Rhododendron simsii
Rhsim11G0176400 Rhododendron simsii
Sabra04G0102100 Salix brachista
Sabra09G0088400 Salix brachista
SalBow6G4765 Salvia bowleyana
SalBow6G5747 Salvia bowleyana
Sc18g0004560 Simmondsia chinensis
Sed0013649 Sechium edule
SEGI_27119 Sequoiadendron giganteum
SEGI_34878 Sequoiadendron giganteum
SGA_v2.0_scaffold32G13163 Striga asiatica
SGA_v2.0_scaffold58G20541 Striga asiatica
SHI05399 Sapria himalayana
SMO356G0126 Selaginella moellendorffii
Solyc01g109560.3 Solanum lycopersicum
Sopen01g051750 Solanum pennellii
Sp7g32260 Schrenkiella parvula
TAR376G0761 Trochodendron aralioides
TAR381G1531 Trochodendron aralioides
TAR628G0260 Trochodendron aralioides
THA.LOC104804353 Tarenaya hassleriana
THA.LOC104807323 Tarenaya hassleriana
Thecc.02G086200 Theobroma cacao
Thhalv10025475m.g Eutrema salsugineum
TPR.G38203 Trifolium pratense
TWI31G0251 Tripterygium wilfordii
TWI75G0614 Tripterygium wilfordii
unitig_60.g25447 Utricularia gibba
vmacro02113 Vaccinium macrocarpon
vmacro02120 Vaccinium macrocarpon
vmacro02122 Vaccinium macrocarpon
vmacro02174 Vaccinium macrocarpon
vmacro17497 Vaccinium macrocarpon
VMungo1127G1308 Vigna mungo
Zm00001eb052290 Zea mays

User provided reference genes

Program Settings