Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p12880 Brassica napus
A09p03630 Brassica napus
Aa31LG9G1570 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4289 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4292 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1258 Anthoceros agrestis
Actinidia03108 Actinidia chinensis
Actinidia31809 Actinidia chinensis
AL3G42280 Arabidopsis lyrata
AL8G26260 Arabidopsis lyrata
Aqoxy6G01685 Aquilegia oxysepala
Aqoxy7G00432 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.28837M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.36XVJD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7N83Z4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.99YBLU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FSRU1U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TF2L72 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VWKV4W Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VXTW3V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y3E72Q Arachis hypogaea
AT2G04630 Arabidopsis thaliana
AT5G51940 Arabidopsis thaliana
ATR0757G129 Amborella trichopoda
Atru.chr1.512 Acer truncatum
Atru.chr3.2134 Acer truncatum
AUR62004298 Chenopodium quinoa
AUR62022747 Chenopodium quinoa
BcaB04g19460 Brassica carinata
BcaB06g27416 Brassica carinata
BcaC04g23878 Brassica carinata
BolC4t26244H Brassica oleracea
BolC9t53311H Brassica oleracea
BraA04t16951Z Brassica rapa
BraA09t36001Z Brassica rapa
C04p46580 Brassica napus
C09p03860 Brassica napus
CAN.G97.6 Capsicum annuum
CANSAT56G1911 Cannabis sativa
CARHR264880 Cardamine hirsuta
Carub.0003s2626 Capsella rubella
Carub.0008s1203 Capsella rubella
CBR_g31915 Chara braunii
Cc02_g03330 Coffea canephora
CDE02G0031 Ceratophyllum demersum
CDE06G2832 Ceratophyllum demersum
Cfa008286 Carpinus fangiana
Cfa020017 Carpinus fangiana
Ciclev10006171m.g Citrus clementina
CiPaw.04G066900 Carya illinoinensis
ClCG05G007860 Citrullus lanatus
COL.COLO4_14270 Corchorus olitorius
Cpa.g.sc370.10 Carica papaya
Cre01.g002200 Chlamydomonas reinhardtii
CsaV3_3G016860 Cucumis sativus L.
CsaV3_3G046320 Cucumis sativus L.
CSS0048006 Camellia sinensis var. sinensis
DCAR_013632 Daucus carota
DCAR_018174 Daucus carota
Dinv28474 Davidia involucrata
Dinv35185 Davidia involucrata
Duzib068G1062 Durio zibethinus
Duzib084G1211 Durio zibethinus
ECA247G1139 Erigeron canadensis
EL10Ac1g00990 Beta vulgaris
Eucgr.H00421 Eucalyptus grandis
FAN15G1651 Fragaria x ananassa
FAN24G1752 Fragaria x ananassa
FAN27G0424 Fragaria x ananassa
FvH4_2g14180 Fragaria vesca
Glyma.10G238600 Glycine max
Glyma.20G155900 Glycine max
Gohir.A08G082700 Gossypium hirsutum
Gohir.A11G009700 Gossypium hirsutum
Gohir.D08G112900 Gossypium hirsutum
Gohir.D11G009000 Gossypium hirsutum
Gohir.D12G260866 Gossypium hirsutum
Gorai.004G121300 Gossypium raimondii
Gorai.007G010600 Gossypium raimondii
GSVIVG01010613001 Vitis vinifera
GSVIVG01020800001 Vitis vinifera
HanXRQChr04g0108631 Helianthus annuus
HanXRQChr16g0532841 Helianthus annuus
Haze_09431 Corylus avellana
Haze_13747 Corylus avellana
Haze_20202 Corylus avellana
Haze_26305 Corylus avellana
Hma1.2p1_0099F.1_g048510 Hydrangea macrophylla
Hma1.2p1_0270F.1_g108370 Hydrangea macrophylla
Hund27319 Selenicereus undatus
Lalb_Chr06g0161031 Lupinus albus
Lalb_Chr21g0304961 Lupinus albus
Lj2g0002682 Lotus japonicus
LjContig00564g0007738 Lotus japonicus
Lsat_1_v5_gn_1_9221 Lactuca sativa
Lsat_1_v5_gn_3_64081 Lactuca sativa
Manes.06G144400 Manihot esculenta
Manes.14G028600 Manihot esculenta
Mapoly0001s0266 Marchantia polymorpha
MBI04_g00300_MAGBIO Magnolia biondii
MBI07_g30196_MAGBIO Magnolia biondii
MCO13G124 Micromonas commoda
MD09G1242800 Malus domestica
MD12G1011200 Malus domestica
MD17G1234800 Malus domestica
Medtr0019s0160 Medicago truncatula
Medtr7g092450 Medicago truncatula
MELO3C003707.2 Cucumis melo
MELO3C006881.2 Cucumis melo
Migut.K00399 Erythranthe guttata
MSTRG.26327 Avicennia marina
MSTRG.27132 Avicennia marina
Nitab4.5_0002077g0060 Nicotiana tabacum
Nitab4.5_0002113g0140 Nicotiana tabacum
Nitab4.5_0006124g0010 Nicotiana tabacum
Nitab4.5_0017332g0010 Nicotiana tabacum
Nn3g21139 Nelumbo nucifera
Oeu021768.1 Olea europaea
Oeu021769.1 Olea europaea
Oeu030115.1 Olea europaea
Oeu061636.1 Olea europaea
Os03g0586600 Oryza sativa ssp. japonica
Os07g0463100 Oryza sativa ssp. japonica
Os08g0426000 Oryza sativa ssp. japonica
Peaxi162Scf00039g01318 Petunia axillaris
Peaxi162Scf01172g00037 Petunia axillaris
PGR102G2559 Punica granatum
PGR142G2678 Punica granatum
PGSC0003DMG400008922 Solanum tuberosum
Phvul.007G009900 Phaseolus vulgaris
Phvul.007G066800 Phaseolus vulgaris
Potri.012G136900 Populus trichocarpa
Potri.015G138800 Populus trichocarpa
Pp3c16_17050 Physcomitrium patens
PRCOL_00007084 Prasinoderma coloniale
Prupe.3G134400 Prunus persica
Prupe.7G013200 Prunus persica
Psat3g070640 Pisum sativum
PSO478G0785 Papaver somniferum
PSO541G1664 Papaver somniferum
PSO675G1382 Papaver somniferum
PSO782G3144 Papaver somniferum
QL06p049138 Quercus lobata
RcHm_v2.0_Chr6g0276321 Rosa chinensis
Rhsim03G0177700 Rhododendron simsii
Rhsim05G0017100 Rhododendron simsii
Sabra12G0102700 Salix brachista
Sabra15G0149800 Salix brachista
SalBow5G5531 Salvia bowleyana
SalBow8G3306 Salvia bowleyana
SalBow8G5018 Salvia bowleyana
Sc23g0003230 Simmondsia chinensis
Sed0011620 Sechium edule
Sed0012084 Sechium edule
SEGI_10630 Sequoiadendron giganteum
SGA_v2.0_scaffold50G18457 Striga asiatica
SGA_v2.0_scaffold59G20747 Striga asiatica
SMO200G0145 Selaginella moellendorffii
Solyc09g010500.3 Solanum lycopersicum
Sopen09g005230 Solanum pennellii
Sp2g17150 Schrenkiella parvula
Sp7g01990 Schrenkiella parvula
TAR374G0228 Trochodendron aralioides
TAR374G0305 Trochodendron aralioides
TAR375G0179 Trochodendron aralioides
TAR375G1045 Trochodendron aralioides
THA.LOC104818368 Tarenaya hassleriana
THA.LOC104819386 Tarenaya hassleriana
Thecc.03G171400 Theobroma cacao
Thhalv10005087m.g Eutrema salsugineum
Thhalv10027983m.g Eutrema salsugineum
TPR.G3844 Trifolium pratense
TWI23G0179 Tripterygium wilfordii
TWI39G1222 Tripterygium wilfordii
unitig_0.g2487 Utricularia gibba
vmacro06714 Vaccinium macrocarpon
vmacro16312 Vaccinium macrocarpon
VMungo0647G2358 Vigna mungo
VMungo0720G0599 Vigna mungo
Zm00001eb049200 Zea mays
Zm00001eb219520 Zea mays

User provided reference genes

Program Settings