Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p00380 Brassica napus
Aa31LG1G22880 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3507 Anthoceros agrestis
Actinidia20726 Actinidia chinensis
Ah.08g221090 Amaranthus hybridus
AL6G10910 Arabidopsis lyrata
Aqoxy4G02610 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.31N575 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.3JQR8Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TSB66L Arachis hypogaea
AT5G01260 Arabidopsis thaliana
ATR0618G237 Amborella trichopoda
Atru.chr8.2220 Acer truncatum
BcaNung06532 Brassica carinata
BolC3t12620H Brassica oleracea
BraA03t09429Z Brassica rapa
C03p00540 Brassica napus
CAN.G772.1 Capsicum annuum
CANSAT35G1529 Cannabis sativa
CARHR211600 Cardamine hirsuta
Carub.0006s0062 Capsella rubella
Ca_20297_v3 Cicer arietinum L.
Cc01_g20760 Coffea canephora
Cc06_g01490 Coffea canephora
CDE03G0216 Ceratophyllum demersum
CDE04G0185 Ceratophyllum demersum
Cfa017221 Carpinus fangiana
Cfa017222 Carpinus fangiana
Ciclev10011409m.g Citrus clementina
CiPaw.09G207900 Carya illinoinensis
ClCG10G022040 Citrullus lanatus
COL.COLO4_14553 Corchorus olitorius
Cpa.g.sc112.34 Carica papaya
Cpa.g.sc163.14 Carica papaya
Cre02.g091750 Chlamydomonas reinhardtii
Cre03.g183300 Chlamydomonas reinhardtii
Cre06.g269601 Chlamydomonas reinhardtii
Cre06.g269650 Chlamydomonas reinhardtii
Cre09.g407501 Chlamydomonas reinhardtii
Cre09.g415600 Chlamydomonas reinhardtii
Cre10.g450500 Chlamydomonas reinhardtii
Cre12.g492750 Chlamydomonas reinhardtii
Cre12.g551200 Chlamydomonas reinhardtii
Cre17.g703000 Chlamydomonas reinhardtii
CsaV3_3G033890 Cucumis sativus L.
CSS0006268 Camellia sinensis var. sinensis
CSS0024242 Camellia sinensis var. sinensis
DCAR_015432 Daucus carota
DCAR_018710 Daucus carota
Dinv03585 Davidia involucrata
Dinv14451 Davidia involucrata
Dinv28631 Davidia involucrata
Duzib106G1511 Durio zibethinus
Duzib128G0737 Durio zibethinus
ECA248G2658 Erigeron canadensis
Eucgr.K02988 Eucalyptus grandis
FAN02G0645 Fragaria x ananassa
FAN05G1413 Fragaria x ananassa
FAN09G2283 Fragaria x ananassa
FAN11G1208 Fragaria x ananassa
FAN14G0248 Fragaria x ananassa
FAN14G4099 Fragaria x ananassa
FAN21G3156 Fragaria x ananassa
FvH4_3g38430 Fragaria vesca
FvH4_6g11650 Fragaria vesca
Glyma.01G115000 Glycine max
Glyma.03G061700 Glycine max
Glyma.03G061751 Glycine max
Glyma.03G061802 Glycine max
Glyma.03G061852 Glycine max
Glyma.03G062100 Glycine max
Glyma.03G062300 Glycine max
Glyma.03G062500 Glycine max
Glyma.03G062800 Glycine max
Glyma.03G063000 Glycine max
Glyma.07G148000 Glycine max
Glyma.18G199300 Glycine max
Glyma.U024600 Glycine max
Gohir.A09G164500 Gossypium hirsutum
Gohir.A11G329600 Gossypium hirsutum
Gohir.D09G160100 Gossypium hirsutum
Gohir.D11G348800 Gossypium hirsutum
Gorai.006G181700 Gossypium raimondii
Gorai.007G379100 Gossypium raimondii
GSVIVG01033976001 Vitis vinifera
HanXRQChr01g0007011 Helianthus annuus
Haze_20987 Corylus avellana
Hma1.2p1_0362F.1_g136090 Hydrangea macrophylla
HPP92_019882 Vanilla planifolia
Hund04870 Selenicereus undatus
Lalb_Chr01g0022961 Lupinus albus
Lalb_Chr03g0043131 Lupinus albus
Lalb_Chr07g0193501 Lupinus albus
Lalb_Chr19g0124721 Lupinus albus
Lj1g0000205 Lotus japonicus
Lj2A76T85 Lonicera japonica
Lj3A954G70 Lonicera japonica
Lj3g0017704 Lotus japonicus
Lsat_1_v5_gn_5_155280 Lactuca sativa
Manes.01G162300 Manihot esculenta
Manes.02G120500 Manihot esculenta
Manes.08G091100 Manihot esculenta
Manes.09G104500 Manihot esculenta
Mapoly0033s0050 Marchantia polymorpha
MBI05_g34490_MAGBIO Magnolia biondii
MCO03G388 Micromonas commoda
MCO09G708 Micromonas commoda
MCO13G353 Micromonas commoda
MCO14G387 Micromonas commoda
MCO16G173 Micromonas commoda
MCO16G384 Micromonas commoda
MCO16G448 Micromonas commoda
MD04G1150500 Malus domestica
MD12G1164600 Malus domestica
Medtr4g015550 Medicago truncatula
MELO3C009176.2 Cucumis melo
Migut.L02004 Erythranthe guttata
MSTRG.10226 Avicennia marina
MSTRG.26804 Avicennia marina
Nitab4.5_0000335g0110 Nicotiana tabacum
Nitab4.5_0008420g0020 Nicotiana tabacum
Nn2g11447 Nelumbo nucifera
Nn2g11448 Nelumbo nucifera
Nn2g13682 Nelumbo nucifera
Oeu055170.1 Olea europaea
Os01g0856900 Oryza sativa ssp. japonica
Os05g0446900 Oryza sativa ssp. japonica
Peaxi162Scf00141g00342 Petunia axillaris
PGR004G0704 Punica granatum
PGR004G1101 Punica granatum
Phvul.008G105500 Phaseolus vulgaris
Phvul.010G002900 Phaseolus vulgaris
Potri.006G099200 Populus trichocarpa
Potri.009G044800 Populus trichocarpa
Potri.016G114500 Populus trichocarpa
Pp3c16_3300 Physcomitrium patens
Pp3c6_22980 Physcomitrium patens
PRCOL_00004061 Prasinoderma coloniale
Prupe.6G058700 Prunus persica
Prupe.6G275300 Prunus persica
Psat7g246040 Pisum sativum
PSO339G2972 Papaver somniferum
PSO566G0059 Papaver somniferum
PSO566G0209 Papaver somniferum
PSO566G0289 Papaver somniferum
PSO566G0296 Papaver somniferum
RcHm_v2.0_Chr3g0463311 Rosa chinensis
Rhsim04G0129000 Rhododendron simsii
Rhsim13G0070300 Rhododendron simsii
Sabra06G0076000 Salix brachista
SalBow4G1747 Salvia bowleyana
SalBow6G3789 Salvia bowleyana
Sc06g0006210 Simmondsia chinensis
Sc06g0006330 Simmondsia chinensis
Sc07g0006540 Simmondsia chinensis
Sc10g0005950 Simmondsia chinensis
Sed0009856 Sechium edule
Sed0014073 Sechium edule
SEGI_38034 Sequoiadendron giganteum
SEGI_39495 Sequoiadendron giganteum
SGA_v2.0_scaffold240G44100 Striga asiatica
SMO118G0122 Selaginella moellendorffii
SMO142G0031 Selaginella moellendorffii
SMO358G0668 Selaginella moellendorffii
Solyc09g014400.3 Solanum lycopersicum
Sopen09g007230 Solanum pennellii
Sp6g40590 Schrenkiella parvula
TAR369G0780 Trochodendron aralioides
TAR369G1072 Trochodendron aralioides
TAR623G0913 Trochodendron aralioides
THA.LOC104816652 Tarenaya hassleriana
Thecc.05G018100 Theobroma cacao
Thhalv10013736m.g Eutrema salsugineum
TPR.G13325 Trifolium pratense
TWI74G0880 Tripterygium wilfordii
unitig_37.g12663 Utricularia gibba
vmacro08854 Vaccinium macrocarpon
VMungo0331G1847 Vigna mungo
VMungo1383G0216 Vigna mungo
Zm00001eb289050 Zea mays
Zm00001eb367050 Zea mays

User provided reference genes

Program Settings