Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p18080 Brassica napus
A05p13020 Brassica napus
A09p67490 Brassica napus
A10p04030 Brassica napus
Aa31LG1G19290 Aethionema arabicum
Aa31LG1G19380 Aethionema arabicum
Aa31LG5G4290 Aethionema arabicum
Actinidia12513 Actinidia chinensis
Actinidia12514 Actinidia chinensis
Actinidia28585 Actinidia chinensis
Actinidia31596 Actinidia chinensis
Actinidia31597 Actinidia chinensis
Ah.11g044370 Amaranthus hybridus
AL1G15120 Arabidopsis lyrata
AL4G27610 Arabidopsis lyrata
Aqoxy1G01455 Aquilegia oxysepala
Aqoxy7G02954 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.7R6RP5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LI5V6E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TP1CMR Arachis hypogaea
AT1G05320 Arabidopsis thaliana
AT2G32240 Arabidopsis thaliana
ATR0763G047 Amborella trichopoda
ATR0763G279 Amborella trichopoda
Atru.chr8.989 Acer truncatum
AUR62009108 Chenopodium quinoa
AUR62020559 Chenopodium quinoa
AUR62020563 Chenopodium quinoa
AUR62043599 Chenopodium quinoa
AUR62043600 Chenopodium quinoa
AUR62043987 Chenopodium quinoa
AUR62044057 Chenopodium quinoa
AUR62044188 Chenopodium quinoa
BcaB01g03995 Brassica carinata
BcaC01g05916 Brassica carinata
BcaC02g11341 Brassica carinata
BcaC07g42136 Brassica carinata
BcaC09g49104 Brassica carinata
BolC3t14493H Brassica oleracea
BolC5t29142H Brassica oleracea
BolC8t52706H Brassica oleracea
BraA03t11067Z Brassica rapa
BraA05t20242Z Brassica rapa
BraA09t42077Z Brassica rapa
BraA10t42674Z Brassica rapa
C01p42510 Brassica napus
C03p21110 Brassica napus
C04p17390 Brassica napus
C05p03650 Brassica napus
C08p51770 Brassica napus
CANSAT64G1444 Cannabis sativa
CANSAT64G1938 Cannabis sativa
CARHR004810 Cardamine hirsuta
CARHR126030 Cardamine hirsuta
Carub.0001s0463 Capsella rubella
Carub.0004s1356 Capsella rubella
Ca_11242_v3 Cicer arietinum L.
Cc04_g04110 Coffea canephora
Cc05_g00050 Coffea canephora
CDE02G0785 Ceratophyllum demersum
CDE02G3965 Ceratophyllum demersum
CDE05G0051 Ceratophyllum demersum
CDE06G0039 Ceratophyllum demersum
Cfa023525 Carpinus fangiana
Ciclev10010914m.g Citrus clementina
CiPaw.03G113300 Carya illinoinensis
CiPaw.04G076200 Carya illinoinensis
ClCG07G010910 Citrullus lanatus
COL.COLO4_33757 Corchorus olitorius
Cpa.g.sc8.294 Carica papaya
CsaV3_4G007390 Cucumis sativus L.
CSS0010582 Camellia sinensis var. sinensis
CSS0042337 Camellia sinensis var. sinensis
DCAR_009841 Daucus carota
DCAR_013337 Daucus carota
Dinv08951 Davidia involucrata
Dinv09877 Davidia involucrata
Dinv29619 Davidia involucrata
Duzib133G0409 Durio zibethinus
Duzib138G1777 Durio zibethinus
ECA246G1737 Erigeron canadensis
EL10Ac2g03814 Beta vulgaris
Eucgr.A00904 Eucalyptus grandis
FAN02G2860 Fragaria x ananassa
FAN05G0560 Fragaria x ananassa
FAN09G2907 Fragaria x ananassa
FAN14G1588 Fragaria x ananassa
FAN14G4911 Fragaria x ananassa
FvH4_6g39571 Fragaria vesca
Glyma.11G096400 Glycine max
Glyma.12G022500 Glycine max
Gohir.A07G081500 Gossypium hirsutum
Gohir.A11G156200 Gossypium hirsutum
Gohir.D07G087100 Gossypium hirsutum
Gohir.D11G163300 Gossypium hirsutum
Gorai.001G093100 Gossypium raimondii
Gorai.007G174000 Gossypium raimondii
GSVIVG01015817001 Vitis vinifera
HanXRQChr06g0171661 Helianthus annuus
HanXRQChr15g0470351 Helianthus annuus
HanXRQChr17g0541141 Helianthus annuus
Haze_13639 Corylus avellana
Hma1.2p1_0401F.1_g144710 Hydrangea macrophylla
HPP92_009459 Vanilla planifolia
HPP92_027643 Vanilla planifolia
Hund19432 Selenicereus undatus
Lalb_Chr01g0001171 Lupinus albus
Lalb_Chr19g0139591 Lupinus albus
Lj1A1039T31 Lonicera japonica
Lj3g0015803 Lotus japonicus
Lsat_1_v5_gn_3_34740 Lactuca sativa
Manes.09G072900 Manihot esculenta
MBI02_g35832_MAGBIO Magnolia biondii
MD09G1138300 Malus domestica
MD09G1138500 Malus domestica
MD17G1128600 Malus domestica
Medtr4g076030 Medicago truncatula
MELO3C016203.2 Cucumis melo
Migut.M00098 Erythranthe guttata
MSTRG.14879 Avicennia marina
MSTRG.6602 Avicennia marina
Nitab4.5_0000170g0440 Nicotiana tabacum
Nitab4.5_0002232g0030 Nicotiana tabacum
Nn7g38253 Nelumbo nucifera
Oeu003096.1 Olea europaea
Oeu016857.1 Olea europaea
Oeu021135.1 Olea europaea
Oeu030768.1 Olea europaea
Oeu048050.1 Olea europaea
Os04g0614650 Oryza sativa ssp. japonica
Os04g0614700 Oryza sativa ssp. japonica
Peaxi162Scf00393g00413 Petunia axillaris
PGR031G3264 Punica granatum
PGSC0003DMG400011753 Solanum tuberosum
Phvul.011G024500 Phaseolus vulgaris
Potri.006G021200 Populus trichocarpa
Potri.016G018700 Populus trichocarpa
Prupe.3G186800 Prunus persica
Psat7g179080 Pisum sativum
PSO541G2929 Papaver somniferum
PSO675G3405 Papaver somniferum
QL04p061548 Quercus lobata
RcHm_v2.0_Chr2g0153621 Rosa chinensis
Rhsim12G0014400 Rhododendron simsii
Sabra06G0014600 Salix brachista
Sabra06G0014700 Salix brachista
Sabra06G0014900 Salix brachista
Sabra06G0015000 Salix brachista
Sabra06G0015100 Salix brachista
Sabra16G0020700 Salix brachista
Sabra16G0025500 Salix brachista
SalBow7G1206 Salvia bowleyana
Sc23g0004300 Simmondsia chinensis
Sed0003037 Sechium edule
Sed0016792 Sechium edule
SEGI_00522 Sequoiadendron giganteum
SEGI_03911 Sequoiadendron giganteum
SGA_v2.0_scaffold181G39737 Striga asiatica
SGA_v2.0_scaffold73G24430 Striga asiatica
Solyc07g043320.3 Solanum lycopersicum
Sopen07g022880 Solanum pennellii
Sp1g04190 Schrenkiella parvula
Sp4g14610 Schrenkiella parvula
TAR624G1065 Trochodendron aralioides
TAR626G1670 Trochodendron aralioides
THA.LOC104800972 Tarenaya hassleriana
THA.LOC104816049 Tarenaya hassleriana
Thecc.01G172500 Theobroma cacao
Thhalv10006865m.g Eutrema salsugineum
Thhalv10016148m.g Eutrema salsugineum
TPR.G21252 Trifolium pratense
TWI34G1284 Tripterygium wilfordii
TWI60G0662 Tripterygium wilfordii
unitig_699.g19629 Utricularia gibba
unitig_85.g27313 Utricularia gibba
unitig_85.g27314 Utricularia gibba
vmacro08755 Vaccinium macrocarpon
VMungo1127G1373 Vigna mungo
Zm00001eb070840 Zea mays
Zm00001eb350060 Zea mays
Zm00001eb427940 Zea mays
Zm00001eb430870 Zea mays

User provided reference genes

Program Settings