Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p48190 Brassica napus
A09p20080 Brassica napus
Aa31LG9G12960 Aethionema arabicum
Actinidia00436 Actinidia chinensis
Actinidia22631 Actinidia chinensis
Actinidia23277 Actinidia chinensis
Ah.11g043080 Amaranthus hybridus
AL8G18050 Arabidopsis lyrata
Aqoxy5G01231 Aquilegia oxysepala
Aqoxy6G01313 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.I5Q2RG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ND8QY1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SW5XY7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V1SQNE Arachis hypogaea
AT5G42900 Arabidopsis thaliana
ATR0988G008 Amborella trichopoda
Atru.chr5.2692 Acer truncatum
BcaB07g31033 Brassica carinata
BcaC02g10794 Brassica carinata
BcaC04g21959 Brassica carinata
BcaC06g31740 Brassica carinata
BolC4t24005H Brassica oleracea
BolC9t55450H Brassica oleracea
BraA06t27688Z Brassica rapa
BraA09t37621Z Brassica rapa
C04p25040 Brassica napus
C09p25480 Brassica napus
CANSAT25G2784 Cannabis sativa
CANSAT25G3506 Cannabis sativa
CARHR181240 Cardamine hirsuta
Carub.0008s0601 Capsella rubella
Ca_18691_v3 Cicer arietinum L.
Cc10_g04110 Coffea canephora
CDE08G1351 Ceratophyllum demersum
Ciclev10002531m.g Citrus clementina
Ciclev10029147m.g Citrus clementina
CiPaw.05G007500 Carya illinoinensis
CiPaw.06G171900 Carya illinoinensis
CiPaw.15G055900 Carya illinoinensis
CiPaw.16G043500 Carya illinoinensis
ClCG02G005970 Citrullus lanatus
COL.COLO4_26514 Corchorus olitorius
Cpa.g.sc49.18 Carica papaya
Cpa.g.sc62.6 Carica papaya
CsaV3_4G034340 Cucumis sativus L.
CsaV3_7G008550 Cucumis sativus L.
CSS0015140 Camellia sinensis var. sinensis
CSS0021091 Camellia sinensis var. sinensis
CSS0036112 Camellia sinensis var. sinensis
DCAR_019451 Daucus carota
Dinv15716 Davidia involucrata
Dinv35957 Davidia involucrata
Dinv39314 Davidia involucrata
Dinv42162 Davidia involucrata
Duzib052G0481 Durio zibethinus
Duzib093G2220 Durio zibethinus
Duzib116G0066 Durio zibethinus
Duzib248G0608 Durio zibethinus
ECA232G3551 Erigeron canadensis
ECA246G0047 Erigeron canadensis
EL10As7g23733 Beta vulgaris
Eucgr.F00223 Eucalyptus grandis
FAN15G1261 Fragaria x ananassa
FvH4_2g34400 Fragaria vesca
Glyma.02G131800 Glycine max
Glyma.07G213000 Glycine max
Glyma.14G083000 Glycine max
Glyma.17G242100 Glycine max
Gohir.A01G007200 Gossypium hirsutum
Gohir.A01G120000 Gossypium hirsutum
Gohir.A05G202700 Gossypium hirsutum
Gohir.A06G018700 Gossypium hirsutum
Gohir.A12G023800 Gossypium hirsutum
Gohir.D01G007300 Gossypium hirsutum
Gohir.D01G108300 Gossypium hirsutum
Gohir.D05G205900 Gossypium hirsutum
Gohir.D06G017100 Gossypium hirsutum
Gohir.D12G024500 Gossypium hirsutum
Gorai.002G008300 Gossypium raimondii
Gorai.002G132500 Gossypium raimondii
Gorai.008G024800 Gossypium raimondii
Gorai.009G212200 Gossypium raimondii
Gorai.010G020000 Gossypium raimondii
GSVIVG01009490001 Vitis vinifera
GSVIVG01024176001 Vitis vinifera
GSVIVG01031734001 Vitis vinifera
HanXRQChr05g0150801 Helianthus annuus
HanXRQChr09g0267581 Helianthus annuus
HanXRQChr14g0439641 Helianthus annuus
Haze_10092 Corylus avellana
Hund23000 Selenicereus undatus
Lalb_Chr05g0219211 Lupinus albus
Lalb_Chr09g0328351 Lupinus albus
Lalb_Chr14g0368651 Lupinus albus
Lalb_Chr22g0355111 Lupinus albus
Lj4g0023306 Lotus japonicus
Lj5C209G18 Lonicera japonica
Lj5g0016368 Lotus japonicus
Lsat_1_v5_gn_4_125741 Lactuca sativa
Lsat_1_v5_gn_6_111920 Lactuca sativa
Manes.10G080100 Manihot esculenta
Manes.18G037600 Manihot esculenta
MBI03_g13463_MAGBIO Magnolia biondii
MD05G1081700 Malus domestica
MD08G1101100 Malus domestica
MD15G1082300 Malus domestica
Medtr1g019360 Medicago truncatula
Medtr4g085990 Medicago truncatula
MELO3C016754.2 Cucumis melo
MELO3C018454.2 Cucumis melo
Migut.C00575 Erythranthe guttata
Migut.N02709 Erythranthe guttata
MSTRG.24332 Avicennia marina
MSTRG.25091 Avicennia marina
Nitab4.5_0000287g0270 Nicotiana tabacum
Nitab4.5_0002760g0070 Nicotiana tabacum
Nn1g04847 Nelumbo nucifera
Nn5g30305 Nelumbo nucifera
Oeu010592.2 Olea europaea
Oeu012963.1 Olea europaea
Oeu025580.1 Olea europaea
Oeu049982.1 Olea europaea
Os03g0184100 Oryza sativa ssp. japonica
Os10g0389500 Oryza sativa ssp. japonica
Peaxi162Scf00252g00410 Petunia axillaris
PGR031G0673 Punica granatum
PGR042G0828 Punica granatum
PGR083G2840 Punica granatum
PGSC0003DMG402007970 Solanum tuberosum
Phvul.001G022200 Phaseolus vulgaris
Phvul.003G291900 Phaseolus vulgaris
Potri.002G125900 Populus trichocarpa
Potri.004G140701 Populus trichocarpa
Potri.009G101400 Populus trichocarpa
Potri.014G029000 Populus trichocarpa
Prupe.1G435100 Prunus persica
Prupe.8G126300 Prunus persica
Psat6g012520 Pisum sativum
Psat7g125520 Pisum sativum
PSO170G6463 Papaver somniferum
PSO210G6487 Papaver somniferum
QL02p004753 Quercus lobata
QL11p035325 Quercus lobata
RcHm_v2.0_Chr6g0307971 Rosa chinensis
Rhsim02G0123800 Rhododendron simsii
Rhsim02G0124700 Rhododendron simsii
Rhsim06G0050200 Rhododendron simsii
Rhsim07G0228200 Rhododendron simsii
Rhsim11G0165200 Rhododendron simsii
Sabra09G0077200 Salix brachista
Sabra14G0019900 Salix brachista
SalBow7G2289 Salvia bowleyana
Sc02g0007160 Simmondsia chinensis
Sed0003020 Sechium edule
Sed0006191 Sechium edule
SEGI_40396 Sequoiadendron giganteum
SGA_v2.0_scaffold32G13060 Striga asiatica
Solyc04g078880.3 Solanum lycopersicum
Sopen04g032480 Solanum pennellii
Sp2g07640 Schrenkiella parvula
SpUn0117_0010 Schrenkiella parvula
TAR376G0615 Trochodendron aralioides
TAR381G1051 Trochodendron aralioides
TAR628G0921 Trochodendron aralioides
THA.LOC104812575 Tarenaya hassleriana
THA.LOC104814167 Tarenaya hassleriana
THA.LOC104822850 Tarenaya hassleriana
Thecc.02G101400 Theobroma cacao
Thecc.08G006700 Theobroma cacao
Thhalv10003264m.g Eutrema salsugineum
TPR.G12693 Trifolium pratense
TPR.G3791 Trifolium pratense
TWI36G0999 Tripterygium wilfordii
TWI36G1706 Tripterygium wilfordii
vmacro02043 Vaccinium macrocarpon
vmacro02044 Vaccinium macrocarpon
vmacro04447 Vaccinium macrocarpon
vmacro21518 Vaccinium macrocarpon
VMungo0251G0642 Vigna mungo
VMungo0647G0635 Vigna mungo
Zm00001eb006310 Zea mays
Zm00001eb027960 Zea mays

User provided reference genes

Program Settings