Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p12430 Brassica napus
A10p16130 Brassica napus
Aa31LG3G13870 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.140 Anthoceros agrestis
Actinidia04285 Actinidia chinensis
Actinidia23546 Actinidia chinensis
Actinidia38339 Actinidia chinensis
Actinidia38340 Actinidia chinensis
Actinidia38679 Actinidia chinensis
Ah.11g041850 Amaranthus hybridus
Ah.14g078210 Amaranthus hybridus
Ah.14g078430 Amaranthus hybridus
AL8G34140 Arabidopsis lyrata
Aqoxy7G03464 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.MXR4WM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y7PKX5 Arachis hypogaea
AT5G58040 Arabidopsis thaliana
ATR0693G160 Amborella trichopoda
ATR0739G197 Amborella trichopoda
Atru.chr7.134 Acer truncatum
AUR62039744 Chenopodium quinoa
AUR62043250 Chenopodium quinoa
BcaB01g04473 Brassica carinata
BcaB08g36155 Brassica carinata
BcaC04g19912 Brassica carinata
BcaC09g49900 Brassica carinata
BolC3t13903H Brassica oleracea
BolC9t57849H Brassica oleracea
BraA03t10557Z Brassica rapa
BraA10t43616Z Brassica rapa
C02p45610 Brassica napus
C03p14630 Brassica napus
C09p49960 Brassica napus
CAN.G1116.7 Capsicum annuum
CANSAT11G0231 Cannabis sativa
CARHR271850 Cardamine hirsuta
Carub.0008s1859 Capsella rubella
Ca_14533_v3 Cicer arietinum L.
CBR_g45968 Chara braunii
CDE02G3961 Ceratophyllum demersum
CDE05G1362 Ceratophyllum demersum
CDE08G0360 Ceratophyllum demersum
Cfa000050 Carpinus fangiana
Cfa003848 Carpinus fangiana
Cfa020847 Carpinus fangiana
Ciclev10007258m.g Citrus clementina
CiPaw.15G174200 Carya illinoinensis
CiPaw.16G114900 Carya illinoinensis
ClCG06G012240 Citrullus lanatus
COL.COLO4_18776 Corchorus olitorius
Cpa.g.sc46.127 Carica papaya
Cre17.g745547 Chlamydomonas reinhardtii
CsaV3_1G028740 Cucumis sativus L.
CSS0005827 Camellia sinensis var. sinensis
CSS0008137 Camellia sinensis var. sinensis
CSS0012306 Camellia sinensis var. sinensis
CSS0034461 Camellia sinensis var. sinensis
CSS0041477 Camellia sinensis var. sinensis
DCAR_003113 Daucus carota
DCAR_015453 Daucus carota
DCAR_019379 Daucus carota
DCAR_020882 Daucus carota
Dinv17810 Davidia involucrata
Dinv41398 Davidia involucrata
Dinv42884 Davidia involucrata
Dinv43216 Davidia involucrata
Duzib168G2294 Durio zibethinus
Duzib187G1590 Durio zibethinus
ECA234G1613 Erigeron canadensis
EL10Ac8g18849 Beta vulgaris
Eucgr.C00363 Eucalyptus grandis
FAN19G1766 Fragaria x ananassa
FAN23G1864 Fragaria x ananassa
FAN26G3236 Fragaria x ananassa
FAN28G2365 Fragaria x ananassa
FvH4_1g01180 Fragaria vesca
Glyma.09G097600 Glycine max
Glyma.15G205600 Glycine max
Gohir.A05G051500 Gossypium hirsutum
Gohir.A07G026300 Gossypium hirsutum
Gohir.A08G113500 Gossypium hirsutum
Gohir.A13G184900 Gossypium hirsutum
Gohir.D05G053000 Gossypium hirsutum
Gohir.D07G030200 Gossypium hirsutum
Gohir.D13G191400 Gossypium hirsutum
Gorai.001G031400 Gossypium raimondii
Gorai.009G054800 Gossypium raimondii
Gorai.013G217400 Gossypium raimondii
GSVIVG01023597001 Vitis vinifera
HanXRQChr01g0004821 Helianthus annuus
HanXRQChr10g0314671 Helianthus annuus
HanXRQChr12g0357201 Helianthus annuus
Haze_19235 Corylus avellana
Hma1.2p1_0222F.1_g093310 Hydrangea macrophylla
Hma1.2p1_2658F.1_g326355 Hydrangea macrophylla
HPP92_016075 Vanilla planifolia
HPP92_020551 Vanilla planifolia
HPP92_020617 Vanilla planifolia
HPP92_020618 Vanilla planifolia
Lalb_Chr08g0233951 Lupinus albus
Lalb_Chr08g0234021 Lupinus albus
Lalb_Chr13g0300951 Lupinus albus
Lj6g0022686 Lotus japonicus
Lj9C714G7 Lonicera japonica
Lsat_1_v5_gn_5_91481 Lactuca sativa
Manes.06G037900 Manihot esculenta
Manes.14G111700 Manihot esculenta
Mapoly0032s0123 Marchantia polymorpha
MBI15_g10629_MAGBIO Magnolia biondii
MCO13G324 Micromonas commoda
MD02G1009900 Malus domestica
Medtr2g450210 Medicago truncatula
MELO3C010242.2 Cucumis melo
Migut.J01330 Erythranthe guttata
Nitab4.5_0001201g0070 Nicotiana tabacum
Nitab4.5_0008534g0010 Nicotiana tabacum
Nn8g39802 Nelumbo nucifera
Oeu026538.1 Olea europaea
Oeu026545.1 Olea europaea
Oeu026546.1 Olea europaea
Oeu026547.1 Olea europaea
Oeu050477.1 Olea europaea
Os03g0308900 Oryza sativa ssp. japonica
Os03g0725050 Oryza sativa ssp. japonica
Os03g0725100 Oryza sativa ssp. japonica
Peaxi162Scf00347g00821 Petunia axillaris
PGR102G2779 Punica granatum
PGSC0003DMG400003182 Solanum tuberosum
Phvul.003G157600 Phaseolus vulgaris
Phvul.009G194000 Phaseolus vulgaris
Potri.006G187400 Populus trichocarpa
Potri.018G110100 Populus trichocarpa
Pp3c11_22610 Physcomitrium patens
Pp3c7_2840 Physcomitrium patens
PRCOL_00006854 Prasinoderma coloniale
Prupe.7G260100 Prunus persica
Psat1g022120 Pisum sativum
PSO017G3118 Papaver somniferum
PSO170G5719 Papaver somniferum
QL02p092676 Quercus lobata
RcHm_v2.0_Chr2g0085981 Rosa chinensis
Rhsim01G0036200 Rhododendron simsii
Rhsim01G0045400 Rhododendron simsii
Rhsim03G0256100 Rhododendron simsii
Sabra06G0142300 Salix brachista
Sabra06G0143300 Salix brachista
Sabra18G0093100 Salix brachista
SalBow1G3877 Salvia bowleyana
SalBow1G6151 Salvia bowleyana
Sc08g0004970 Simmondsia chinensis
Sed0010991 Sechium edule
Sed0025790 Sechium edule
SEGI_08940 Sequoiadendron giganteum
SGA_v2.0_scaffold206G41814 Striga asiatica
SGA_v2.0_scaffold21G09645 Striga asiatica
SGA_v2.0_scaffold387G50508 Striga asiatica
SHI00143 Sapria himalayana
SHI02623 Sapria himalayana
SHI02624 Sapria himalayana
SHI02625 Sapria himalayana
SHI02626 Sapria himalayana
SHI02627 Sapria himalayana
SMO115G0353 Selaginella moellendorffii
Solyc07g005320.3 Solanum lycopersicum
Sopen07g001470 Solanum pennellii
Sp6g19720 Schrenkiella parvula
TAR625G1002 Trochodendron aralioides
TAR636G1028 Trochodendron aralioides
THA.LOC104813541 Tarenaya hassleriana
THA.LOC104817824 Tarenaya hassleriana
Thecc.09G033700 Theobroma cacao
Thhalv10012479m.g Eutrema salsugineum
TPR.G35880 Trifolium pratense
TWI34G0110 Tripterygium wilfordii
TWI63G1714 Tripterygium wilfordii
unitig_0.g2698 Utricularia gibba
vmacro05800 Vaccinium macrocarpon
vmacro06092 Vaccinium macrocarpon
VMungo1215G0704 Vigna mungo
VMungo1309G0106 Vigna mungo
Zm00001eb014820 Zea mays
Zm00001eb055800 Zea mays
Zm00001eb215820 Zea mays

User provided reference genes

Program Settings