Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p17720 Brassica napus
Aa31LG5G9110 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.87 Anthoceros agrestis
Actinidia07426 Actinidia chinensis
Actinidia07427 Actinidia chinensis
Actinidia26393 Actinidia chinensis
Ah.09g226220 Amaranthus hybridus
Ah.09g226230 Amaranthus hybridus
AL8G25470 Arabidopsis lyrata
Aqoxy3G01756 Aquilegia oxysepala
Aqoxy7G02178 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6DBV70 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GK8SHH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HIW0J1 Arachis hypogaea
AT5G51200 Arabidopsis thaliana
ATR0322G028 Amborella trichopoda
ATR0322G071 Amborella trichopoda
ATR0322G072 Amborella trichopoda
Atru.chr7.1164 Acer truncatum
AUR62011127 Chenopodium quinoa
AUR62013362 Chenopodium quinoa
BolC7t43085H Brassica oleracea
BraA07t29494Z Brassica rapa
C07p25670 Brassica napus
CAN.G1024.1 Capsicum annuum
CAN.G1616.4 Capsicum annuum
CAN.G816.2 Capsicum annuum
CANSAT11G0130 Cannabis sativa
CARHR118630 Cardamine hirsuta
Carub.0008s1091 Capsella rubella
Ca_14403_v3 Cicer arietinum L.
Ca_29538_v3 Cicer arietinum L.
CBR_g37692 Chara braunii
CBR_g76107 Chara braunii
Cc06_g08530 Coffea canephora
CDE02G1439 Ceratophyllum demersum
CDE02G1576 Ceratophyllum demersum
Cfa003371 Carpinus fangiana
Ciclev10007244m.g Citrus clementina
CiPaw.03G243900 Carya illinoinensis
CiPaw.03G244000 Carya illinoinensis
ClCG11G003010 Citrullus lanatus
COL.COLO4_35084 Corchorus olitorius
Cpa.g.c32453 Carica papaya
Cpa.g.c37328 Carica papaya
Cpa.g.c42453 Carica papaya
Cpa.g.sc75.30 Carica papaya
Cpa.g.sc75.31 Carica papaya
Cpa.g.sc75.37 Carica papaya
Cre13.g578100 Chlamydomonas reinhardtii
CsaV3_2G002830 Cucumis sativus L.
DCAR_017818 Daucus carota
Dinv36529 Davidia involucrata
Duzib168G2222 Durio zibethinus
Duzib187G1323 Durio zibethinus
ECA234G1804 Erigeron canadensis
ECA234G3994 Erigeron canadensis
ECA246G0254 Erigeron canadensis
ECA246G1679 Erigeron canadensis
EL10Ac8g18652 Beta vulgaris
Eucgr.C04218 Eucalyptus grandis
FAN19G1245 Fragaria x ananassa
FAN19G2182 Fragaria x ananassa
FAN23G1640 Fragaria x ananassa
FAN26G1438 Fragaria x ananassa
FAN28G2120 Fragaria x ananassa
FvH4_1g03320 Fragaria vesca
FvH4_6g38782 Fragaria vesca
FvH4_6g38790 Fragaria vesca
Glyma.06G222100 Glycine max
Gohir.A07G035800 Gossypium hirsutum
Gohir.D07G039800 Gossypium hirsutum
Gorai.001G042000 Gossypium raimondii
GSVIVG01015528001 Vitis vinifera
HanXRQChr04g0119281 Helianthus annuus
HanXRQChr10g0315491 Helianthus annuus
HanXRQChr12g0373951 Helianthus annuus
Haze_25580 Corylus avellana
Hma1.2p1_0018F.1_g012430 Hydrangea macrophylla
Hma1.2p1_0018F.1_g012440 Hydrangea macrophylla
Hma1.2p1_2368F.1_g320720 Hydrangea macrophylla
HPP92_008648 Vanilla planifolia
HPP92_008649 Vanilla planifolia
HPP92_008667 Vanilla planifolia
HPP92_008668 Vanilla planifolia
Hund09133 Selenicereus undatus
Lalb_Chr08g0234811 Lupinus albus
Lalb_Chr08g0234831 Lupinus albus
Lalb_Chr11g0072121 Lupinus albus
Lj3g0001115 Lotus japonicus
Lj7C629G11 Lonicera japonica
Lsat_1_v5_gn_3_39400 Lactuca sativa
Lsat_1_v5_gn_5_62781 Lactuca sativa
Lsat_1_v5_gn_5_96021 Lactuca sativa
Lsat_1_v5_gn_7_7080 Lactuca sativa
Manes.05G119700 Manihot esculenta
Mapoly0052s0095 Marchantia polymorpha
MBI06_g09275_MAGBIO Magnolia biondii
MBI13_g38968_MAGBIO Magnolia biondii
MCO11G810 Micromonas commoda
MD02G1032900 Malus domestica
MD16G1253500 Malus domestica
Medtr6g086755 Medicago truncatula
Medtr7g099880 Medicago truncatula
MELO3C004510.2 Cucumis melo
Migut.J01158 Erythranthe guttata
MSTRG.19598 Avicennia marina
Nitab4.5_0002658g0150 Nicotiana tabacum
Nitab4.5_0008846g0010 Nicotiana tabacum
Nn8g39448 Nelumbo nucifera
Oeu055885.1 Olea europaea
Oeu055886.1 Olea europaea
Os02g0202250 Oryza sativa ssp. japonica
Os02g0202300 Oryza sativa ssp. japonica
Peaxi162Scf00062g02012 Petunia axillaris
Peaxi162Scf00574g00919 Petunia axillaris
Peaxi162Scf00574g00927 Petunia axillaris
Peaxi162Scf01211g00016 Petunia axillaris
PGR102G3028 Punica granatum
Phvul.009G198200 Phaseolus vulgaris
Potri.006G119600 Populus trichocarpa
Pp3c20_13260 Physcomitrium patens
Pp3c23_3420 Physcomitrium patens
Pp3c4_20350 Physcomitrium patens
PRCOL_00003394 Prasinoderma coloniale
Prupe.1G010000 Prunus persica
Prupe.7G242500 Prunus persica
Psat0s3979g0040 Pisum sativum
Psat1g024680 Pisum sativum
Psat5g250280 Pisum sativum
Psat6g208520 Pisum sativum
Psat6g208560 Pisum sativum
Psat7g006280 Pisum sativum
Psat7g264120 Pisum sativum
PSO170G4267 Papaver somniferum
PSO455G0084 Papaver somniferum
PSO478G0731 Papaver somniferum
QL02p088302 Quercus lobata
QL02p088328 Quercus lobata
RcHm_v2.0_Chr2g0088511 Rosa chinensis
RcHm_v2.0_Chr2g0152361 Rosa chinensis
RcHm_v2.0_Chr2g0152391 Rosa chinensis
RcHm_v2.0_Chr3g0479611 Rosa chinensis
RcHm_v2.0_Chr4g0403131 Rosa chinensis
RcHm_v2.0_Chr4g0403161 Rosa chinensis
RcHm_v2.0_Chr4g0419441 Rosa chinensis
RcHm_v2.0_Chr5g0006961 Rosa chinensis
RcHm_v2.0_Chr5g0007071 Rosa chinensis
RcHm_v2.0_Chr5g0007211 Rosa chinensis
RcHm_v2.0_Chr5g0007271 Rosa chinensis
RcHm_v2.0_Chr5g0007281 Rosa chinensis
RcHm_v2.0_Chr5g0007291 Rosa chinensis
RcHm_v2.0_Chr5g0007331 Rosa chinensis
Rhsim03G0247900 Rhododendron simsii
Sabra06G0094200 Salix brachista
Sc08g0006640 Simmondsia chinensis
Sed0006485 Sechium edule
Sed0006794 Sechium edule
SEGI_02226 Sequoiadendron giganteum
SEGI_04425 Sequoiadendron giganteum
SEGI_08250 Sequoiadendron giganteum
SEGI_13925 Sequoiadendron giganteum
SEGI_19045 Sequoiadendron giganteum
SEGI_27908 Sequoiadendron giganteum
SEGI_34338 Sequoiadendron giganteum
SHI03382 Sapria himalayana
SHI03385 Sapria himalayana
SMO347G0235 Selaginella moellendorffii
Solyc12g006480.2 Solanum lycopersicum
Sopen12g002420 Solanum pennellii
Sp4g09050 Schrenkiella parvula
TAR625G0211 Trochodendron aralioides
THA.LOC104808989 Tarenaya hassleriana
Thecc.09G126200 Theobroma cacao
Thhalv10002339m.g Eutrema salsugineum
TPR.G21471 Trifolium pratense
TWI34G1787 Tripterygium wilfordii
unitig_26.g8982 Utricularia gibba
vmacro06129 Vaccinium macrocarpon
vmacro22117 Vaccinium macrocarpon
VMungo1309G0107 Vigna mungo
Zm00001eb121860 Zea mays
Zm00001eb235620 Zea mays

User provided reference genes

Program Settings