Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p37610 Brassica napus
A09p05240 Brassica napus
A10p03590 Brassica napus
Aa31LG11G9150 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2518 Anthoceros agrestis
Actinidia05727 Actinidia chinensis
Actinidia23606 Actinidia chinensis
Actinidia24503 Actinidia chinensis
Ah.06g190170 Amaranthus hybridus
AL6G39640 Arabidopsis lyrata
Aqoxy2G03198 Aquilegia oxysepala
Aqoxy5G00559 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1T3PYK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RYM43V Arachis hypogaea
AT5G27380 Arabidopsis thaliana
ATR0626G007 Amborella trichopoda
ATR0626G021 Amborella trichopoda
Atru.chr2.496 Acer truncatum
AUR62000859 Chenopodium quinoa
AUR62005115 Chenopodium quinoa
BcaB04g19665 Brassica carinata
BcaC04g23683 Brassica carinata
BcaC05g27416 Brassica carinata
BcaNung02467 Brassica carinata
BcaNung04364 Brassica carinata
BolC5t32099H Brassica oleracea
BolC7t44598H Brassica oleracea
BolC9t53499H Brassica oleracea
BraA06t26680Z Brassica rapa
BraA09t36163Z Brassica rapa
C05p33690 Brassica napus
C07p40700 Brassica napus
C09p05700 Brassica napus
CAN.G1134.12 Capsicum annuum
CAN.G299.1 Capsicum annuum
CAN.G73.7 Capsicum annuum
CANSAT54G0870 Cannabis sativa
CARHR185970 Cardamine hirsuta
Carub.0006s2517 Capsella rubella
Ca_09375_v3 Cicer arietinum L.
Ca_09376_v3 Cicer arietinum L.
CBR_g15993 Chara braunii
Cc02_g32590 Coffea canephora
Cfa006539 Carpinus fangiana
Cfa024552 Carpinus fangiana
Ciclev10000728m.g Citrus clementina
CiPaw.08G167300 Carya illinoinensis
ClCG03G016760 Citrullus lanatus
COL.COLO4_10335 Corchorus olitorius
COL.COLO4_12128 Corchorus olitorius
COL.COLO4_24985 Corchorus olitorius
Cpa.g.sc48.5 Carica papaya
Cre17.g708800 Chlamydomonas reinhardtii
CsaV3_1G039210 Cucumis sativus L.
CSS0000499 Camellia sinensis var. sinensis
CSS0005723 Camellia sinensis var. sinensis
CSS0007130 Camellia sinensis var. sinensis
CSS0020414 Camellia sinensis var. sinensis
DCAR_002932 Daucus carota
DCAR_005538 Daucus carota
DCAR_029443 Daucus carota
Duzib147G0043 Durio zibethinus
ECA238G1346 Erigeron canadensis
ECA238G2357 Erigeron canadensis
EL10Ac4g09299 Beta vulgaris
Eucgr.H04446 Eucalyptus grandis
Eucgr.H04452 Eucalyptus grandis
FAN02G0487 Fragaria x ananassa
FAN05G1904 Fragaria x ananassa
FAN05G2944 Fragaria x ananassa
FAN09G3025 Fragaria x ananassa
FAN14G0860 Fragaria x ananassa
FAN14G3644 Fragaria x ananassa
FvH4_6g05260 Fragaria vesca
Glyma.03G240600 Glycine max
Glyma.03G240651 Glycine max
Glyma.19G237700 Glycine max
Glyma.19G237800 Glycine max
Glyma.19G237900 Glycine max
Gohir.A11G224810 Gossypium hirsutum
Gohir.D11G232600 Gossypium hirsutum
Gorai.003G066300 Gossypium raimondii
GSVIVG01022056001 Vitis vinifera
HanXRQChr10g0295061 Helianthus annuus
HanXRQChr10g0295071 Helianthus annuus
HanXRQChr14g0446461 Helianthus annuus
HanXRQChr14g0446471 Helianthus annuus
Haze_04251 Corylus avellana
Hma1.2p1_0666F.1_g199390 Hydrangea macrophylla
HPP92_001826 Vanilla planifolia
Hund07038 Selenicereus undatus
Lalb_Chr15g0077051 Lupinus albus
Lalb_Chr15g0077061 Lupinus albus
Lalb_Chr18g0045501 Lupinus albus
Lj1g0000488 Lotus japonicus
Lj1g0009738 Lotus japonicus
Lj9A681G36 Lonicera japonica
Lsat_1_v5_gn_2_64341 Lactuca sativa
Manes.08G123500 Manihot esculenta
Manes.09G162900 Manihot esculenta
Mapoly0002s0041 Marchantia polymorpha
MBI17_g18114_MAGBIO Magnolia biondii
MCO07G639 Micromonas commoda
MD04G1210100 Malus domestica
MD12G1224500 Malus domestica
Medtr7g113880 Medicago truncatula
Medtr7g113890 Medicago truncatula
MELO3C015345.2 Cucumis melo
Migut.F01584 Erythranthe guttata
MSTRG.8108 Avicennia marina
Nitab4.5_0001423g0150 Nicotiana tabacum
Nitab4.5_0004940g0030 Nicotiana tabacum
Nn1g02104 Nelumbo nucifera
Nn1g08360 Nelumbo nucifera
Nn1g08361 Nelumbo nucifera
Nn1g08367 Nelumbo nucifera
Oeu027914.1 Olea europaea
Os11g0642800 Oryza sativa ssp. japonica
Os12g0263000 Oryza sativa ssp. japonica
Os12g0528400 Oryza sativa ssp. japonica
Peaxi162Scf00434g00336 Petunia axillaris
PGR031G1040 Punica granatum
PGSC0003DMG400028599 Solanum tuberosum
Phvul.006G094500 Phaseolus vulgaris
Phvul.006G094600 Phaseolus vulgaris
Phvul.006G094700 Phaseolus vulgaris
Potri.005G038100 Populus trichocarpa
Potri.013G026800 Populus trichocarpa
Pp3c1_36280 Physcomitrium patens
PRCOL_00004575 Prasinoderma coloniale
Prupe.6G331000 Prunus persica
Psat1g075760 Pisum sativum
Psat3g009360 Pisum sativum
Psat3g009920 Pisum sativum
PSO210G1178 Papaver somniferum
PSO832G1867 Papaver somniferum
QL03p004251 Quercus lobata
RcHm_v2.0_Chr2g0172951 Rosa chinensis
RcHm_v2.0_Chr2g0172961 Rosa chinensis
RcHm_v2.0_Chr2g0172971 Rosa chinensis
RcHm_v2.0_Chr2g0172981 Rosa chinensis
RcHm_v2.0_Chr3g0453991 Rosa chinensis
RcHm_v2.0_Chr6g0303351 Rosa chinensis
Rhsim07G0179200 Rhododendron simsii
RhsimUnG0080300 Rhododendron simsii
Sabra05G0037900 Salix brachista
Sabra05G0038000 Salix brachista
SalBow6G1775 Salvia bowleyana
Sc09g0003380 Simmondsia chinensis
Sed0026847 Sechium edule
SEGI_25900 Sequoiadendron giganteum
SEGI_31082 Sequoiadendron giganteum
SGA_v2.0_scaffold13G06464 Striga asiatica
SGA_v2.0_scaffold499G52492 Striga asiatica
SMO164G0195 Selaginella moellendorffii
SMO164G0207 Selaginella moellendorffii
SMO271G0026 Selaginella moellendorffii
SMO304G0024 Selaginella moellendorffii
SMO304G0030 Selaginella moellendorffii
Solyc01g098610.4 Solanum lycopersicum
Sopen01g042160 Solanum pennellii
Sp2g20600 Schrenkiella parvula
TAR365G0614 Trochodendron aralioides
TAR636G1925 Trochodendron aralioides
TAR636G2499 Trochodendron aralioides
THA.LOC104821704 Tarenaya hassleriana
Thecc.02G212900 Theobroma cacao
Thhalv10003956m.g Eutrema salsugineum
TPR.G33164 Trifolium pratense
TPR.G33204 Trifolium pratense
TWI56G0745 Tripterygium wilfordii
unitig_26.g9470 Utricularia gibba
vmacro05036 Vaccinium macrocarpon
VMungo0540G0577 Vigna mungo
VMungo0540G1019 Vigna mungo
VMungo0540G2084 Vigna mungo
VMungo0540G2112 Vigna mungo
Zm00001eb115470 Zea mays
Zm00001eb115490 Zea mays
Zm00001eb126550 Zea mays
Zm00001eb137820 Zea mays
Zm00001eb275300 Zea mays
Zm00001eb275310 Zea mays

User provided reference genes

Program Settings