Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p08020 Brassica napus
Aa31LG1G28620 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4368 Anthoceros agrestis
Actinidia00830 Actinidia chinensis
Actinidia03664 Actinidia chinensis
Actinidia03665 Actinidia chinensis
Ah.02g112390 Amaranthus hybridus
AL302U10030 Arabidopsis lyrata
AL4G46860 Arabidopsis lyrata
Aqoxy3G01505 Aquilegia oxysepala
Aqoxy3G01506 Aquilegia oxysepala
Aqoxy6G02867 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.25S2F8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8X0TS3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.C8HKPK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CZ320C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NW0172 Arachis hypogaea
AT2G47300 Arabidopsis thaliana
ATR0693G226 Amborella trichopoda
Atru.chr5.975 Acer truncatum
Atru.chr9.1365 Acer truncatum
AUR62011780 Chenopodium quinoa
AUR62024624 Chenopodium quinoa
BcaB02g08631 Brassica carinata
BcaC02g09356 Brassica carinata
BolC4t25747H Brassica oleracea
BraA04t16490Z Brassica rapa
C04p41700 Brassica napus
CAN.G135.34 Capsicum annuum
CAN.G231.17 Capsicum annuum
CANSAT35G0058 Cannabis sativa
CARHR142690 Cardamine hirsuta
Carub.0004s3002 Capsella rubella
Ca_26914_v3 Cicer arietinum L.
Ca_29676_v3 Cicer arietinum L.
CBR_g17052 Chara braunii
CBR_g41368 Chara braunii
Cc00_g01260 Coffea canephora
Cc00_g26020 Coffea canephora
Cc00_g26030 Coffea canephora
Cc02_g29260 Coffea canephora
Cc02_g30290 Coffea canephora
CDE11G0119 Ceratophyllum demersum
CDE11G1215 Ceratophyllum demersum
Cfa004172 Carpinus fangiana
Cfa027026 Carpinus fangiana
Ciclev10023744m.g Citrus clementina
CiPaw.05G057200 Carya illinoinensis
CiPaw.05G057300 Carya illinoinensis
CiPaw.05G057600 Carya illinoinensis
CiPaw.05G057800 Carya illinoinensis
CiPaw.13G125700 Carya illinoinensis
COL.COLO4_23214 Corchorus olitorius
Cpa.g.sc18.67 Carica papaya
Cpa.g.sc18.69 Carica papaya
Cre04.g214690 Chlamydomonas reinhardtii
CsaV3_4G006310 Cucumis sativus L.
CSS0000786 Camellia sinensis var. sinensis
CSS0004415 Camellia sinensis var. sinensis
DCAR_018285 Daucus carota
Dinv10116 Davidia involucrata
Dinv10117 Davidia involucrata
Dinv37509 Davidia involucrata
Duzib211G0665 Durio zibethinus
ECA236G0722 Erigeron canadensis
ECA248G1618 Erigeron canadensis
EL10As5g23552 Beta vulgaris
Eucgr.D02543 Eucalyptus grandis
Eucgr.F03545 Eucalyptus grandis
FAN19G1056 Fragaria x ananassa
FAN23G2430 Fragaria x ananassa
FAN26G0338 Fragaria x ananassa
FAN28G1741 Fragaria x ananassa
FvH4_1g27070 Fragaria vesca
Glyma.04G000100 Glycine max
Glyma.05G249100 Glycine max
Glyma.09G000100 Glycine max
Glyma.09G286500 Glycine max
Glyma.15G216400 Glycine max
Glyma.16G000100 Glycine max
Glyma.16G071100 Glycine max
Glyma.17G000100 Glycine max
Glyma.17G000200 Glycine max
Gohir.A11G108400 Gossypium hirsutum
Gohir.D11G112900 Gossypium hirsutum
Gorai.007G121400 Gossypium raimondii
GSVIVG01020570001 Vitis vinifera
GSVIVG01038383001 Vitis vinifera
GSVIVG01038399001 Vitis vinifera
HanXRQChr01g0018011 Helianthus annuus
HanXRQChr06g0163761 Helianthus annuus
HanXRQChr06g0163771 Helianthus annuus
HanXRQChr17g0537991 Helianthus annuus
Haze_15238 Corylus avellana
Haze_16412 Corylus avellana
HPP92_010605 Vanilla planifolia
Hund21053 Selenicereus undatus
Lalb_Chr02g0146891 Lupinus albus
Lj2A672T51 Lonicera japonica
Lj2A672T52 Lonicera japonica
Lj3g0021338 Lotus japonicus
Lj4g0003540 Lotus japonicus
Lsat_1_v5_gn_1_61501 Lactuca sativa
Lsat_1_v5_gn_8_112581 Lactuca sativa
Manes.05G007428 Manihot esculenta
Manes.05G010463 Manihot esculenta
Manes.05G012284 Manihot esculenta
Manes.05G014105 Manihot esculenta
Manes.05G014400 Manihot esculenta
Manes.08G002202 Manihot esculenta
Manes.17G075900 Manihot esculenta
Mapoly0039s0104 Marchantia polymorpha
MBI02_g41251_MAGBIO Magnolia biondii
MBI16_g26326_MAGBIO Magnolia biondii
MBI18_g24870_MAGBIO Magnolia biondii
MBI19_g03239_MAGBIO Magnolia biondii
MBI19_g28115_MAGBIO Magnolia biondii
MD17G1273000 Malus domestica
MD17G1275500 Malus domestica
MD17G1275600 Malus domestica
MD17G1275700 Malus domestica
MD17G1275800 Malus domestica
MD17G1277400 Malus domestica
Medtr4g008840 Medicago truncatula
MELO3C016319.2 Cucumis melo
Migut.N00382 Erythranthe guttata
MSTRG.19341 Avicennia marina
MSTRG.19342 Avicennia marina
Nitab4.5_0000321g0240 Nicotiana tabacum
Nitab4.5_0004412g0060 Nicotiana tabacum
Nitab4.5_0004743g0050 Nicotiana tabacum
Nn6g32438 Nelumbo nucifera
Oeu049922.1 Olea europaea
Os11g0677425 Oryza sativa ssp. japonica
Os11g0677500 Oryza sativa ssp. japonica
Peaxi162Scf00192g01619 Petunia axillaris
PGR044G1293 Punica granatum
PGR132G0005 Punica granatum
PGSC0003DMG400027361 Solanum tuberosum
Phvul.011G184700 Phaseolus vulgaris
Potri.002G194100 Populus trichocarpa
Pp3c2_6540 Physcomitrium patens
Prupe.3G010600 Prunus persica
Psat4g209760 Pisum sativum
Psat7g259120 Pisum sativum
PSO339G3435 Papaver somniferum
PSO384G2631 Papaver somniferum
QL03p022487 Quercus lobata
RcHm_v2.0_Chr3g0487391 Rosa chinensis
RcHm_v2.0_Chr3g0487761 Rosa chinensis
Rhsim13G0004000 Rhododendron simsii
Sabra02G0162300 Salix brachista
SalBow1G0003 Salvia bowleyana
SalBow3G2203 Salvia bowleyana
SalBow3G2832 Salvia bowleyana
Sc05g0000350 Simmondsia chinensis
Sed0003653 Sechium edule
Sed0008176 Sechium edule
SEGI_18930 Sequoiadendron giganteum
SGA_v2.0_scaffold114G31985 Striga asiatica
Solyc11g007800.3 Solanum lycopersicum
Sopen11g003660 Solanum pennellii
Sp7g11950 Schrenkiella parvula
TAR623G1284 Trochodendron aralioides
TAR629G0826 Trochodendron aralioides
TAR629G2570 Trochodendron aralioides
TAR633G1738 Trochodendron aralioides
THA.LOC104807090 Tarenaya hassleriana
THA.LOC104808447 Tarenaya hassleriana
Thecc.01G315600 Theobroma cacao
Thhalv10024413m.g Eutrema salsugineum
TPR.G18538 Trifolium pratense
TPR.G23107 Trifolium pratense
TPR.G29732 Trifolium pratense
TPR.G35143 Trifolium pratense
TPR.G844 Trifolium pratense
TWI36G1552 Tripterygium wilfordii
unitig_8.g3963 Utricularia gibba
vmacro02393 Vaccinium macrocarpon
vmacro07358 Vaccinium macrocarpon
vmacro23005 Vaccinium macrocarpon
VMungo1127G2096 Vigna mungo
Zm00001eb331260 Zea mays

User provided reference genes

Program Settings