Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p03680 Brassica napus
Aa31LG1G19600 Aethionema arabicum
Aa31LG5G4820 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5529 Anthoceros agrestis
Actinidia15389 Actinidia chinensis
Actinidia22493 Actinidia chinensis
Ah.05g171920 Amaranthus hybridus
AL1G14910 Arabidopsis lyrata
AL4G27840 Arabidopsis lyrata
Aqoxy4G00398 Aquilegia oxysepala
Aqoxy5G01483 Aquilegia oxysepala
Aqoxy6G02380 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.K8KKRC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VC055M Arachis hypogaea
AT1G05150 Arabidopsis thaliana
AT2G32450 Arabidopsis thaliana
ATR0030G011 Amborella trichopoda
ATR0620G056 Amborella trichopoda
Atru.chr13.357 Acer truncatum
AUR62014428 Chenopodium quinoa
AUR62034569 Chenopodium quinoa
BcaC05g24429 Brassica carinata
BcaC07g36859 Brassica carinata
BcaC07g36860 Brassica carinata
BcaNung05933 Brassica carinata
BolC5t29114H Brassica oleracea
BolC5t29116H Brassica oleracea
BolC8t46977H Brassica oleracea
BraA10t42641Z Brassica rapa
C05p03390 Brassica napus
C08p01770 Brassica napus
CAN.G851.8 Capsicum annuum
CANSAT25G1149 Cannabis sativa
CARHR004600 Cardamine hirsuta
CARHR126280 Cardamine hirsuta
Carub.0001s0442 Capsella rubella
Carub.0004s1380 Capsella rubella
Ca_11895_v3 Cicer arietinum L.
Ca_30287_v3 Cicer arietinum L.
CBR_g21825 Chara braunii
Cc10_g02100 Coffea canephora
Cc10_g07350 Coffea canephora
CDE02G1942 Ceratophyllum demersum
CDE05G0031 Ceratophyllum demersum
CDE10G1342 Ceratophyllum demersum
Cfa013905 Carpinus fangiana
Ciclev10000324m.g Citrus clementina
CiPaw.07G154200 Carya illinoinensis
CiPaw.08G062900 Carya illinoinensis
ClCG05G018570 Citrullus lanatus
COL.COLO4_26196 Corchorus olitorius
Cpa.g.sc140.21 Carica papaya
Cpa.g.sc99.31 Carica papaya
CsaV3_1G045450 Cucumis sativus L.
CsaV3_1G045460 Cucumis sativus L.
CsaV3_UNG233280 Cucumis sativus L.
CsaV3_UNG233290 Cucumis sativus L.
CSS0007586 Camellia sinensis var. sinensis
CSS0029452 Camellia sinensis var. sinensis
CSS0038687 Camellia sinensis var. sinensis
DCAR_022445 Daucus carota
Dinv31811 Davidia involucrata
Dinv39487 Davidia involucrata
Duzib041G0542 Durio zibethinus
Duzib116G0012 Durio zibethinus
ECA232G3638 Erigeron canadensis
ECA246G3046 Erigeron canadensis
EL10Ac1g00554 Beta vulgaris
Eucgr.F01620 Eucalyptus grandis
FAN03G1393 Fragaria x ananassa
FAN05G3899 Fragaria x ananassa
FAN12G1591 Fragaria x ananassa
FAN12G1929 Fragaria x ananassa
FAN12G2681 Fragaria x ananassa
FAN14G4182 Fragaria x ananassa
FAN15G1267 Fragaria x ananassa
FAN20G0205 Fragaria x ananassa
FAN20G0559 Fragaria x ananassa
FAN27G0346 Fragaria x ananassa
FvH4_2g39050 Fragaria vesca
Glyma.10G132800 Glycine max
Glyma.20G084100 Glycine max
Gohir.A01G113100 Gossypium hirsutum
Gohir.A05G188400 Gossypium hirsutum
Gohir.D01G100800 Gossypium hirsutum
Gohir.D05G191500 Gossypium hirsutum
Gorai.002G125100 Gossypium raimondii
Gorai.009G196800 Gossypium raimondii
GSVIVG01009826001 Vitis vinifera
HanXRQChr05g0156281 Helianthus annuus
HanXRQChr09g0269391 Helianthus annuus
HanXRQChr13g0424291 Helianthus annuus
Haze_22585 Corylus avellana
Hma1.2p1_0773F.1_g216160 Hydrangea macrophylla
Hma1.2p1_1386F.1_g279810 Hydrangea macrophylla
HPP92_006843 Vanilla planifolia
HPP92_027211 Vanilla planifolia
HPP92_027212 Vanilla planifolia
HPP92_027213 Vanilla planifolia
Lalb_Chr03g0036971 Lupinus albus
Lalb_Chr19g0128511 Lupinus albus
Lj4C29T2 Lonicera japonica
Lj6g0007889 Lotus japonicus
Lsat_1_v5_gn_4_116240 Lactuca sativa
Lsat_1_v5_gn_4_36661 Lactuca sativa
Lsat_1_v5_gn_5_26081 Lactuca sativa
Manes.05G152300 Manihot esculenta
Manes.18G017800 Manihot esculenta
Mapoly0016s0016 Marchantia polymorpha
MBI05_g04846_MAGBIO Magnolia biondii
MBI16_g07670_MAGBIO Magnolia biondii
MD08G1018000 Malus domestica
MD15G1017300 Malus domestica
Medtr1g045490 Medicago truncatula
MELO3C024651.2 Cucumis melo
Migut.N03134 Erythranthe guttata
MSTRG.24265 Avicennia marina
MSTRG.25220 Avicennia marina
Nitab4.5_0000352g0010 Nicotiana tabacum
Nitab4.5_0004368g0010 Nicotiana tabacum
Nitab4.5_0012730g0020 Nicotiana tabacum
Nn4g23567 Nelumbo nucifera
Nn5g29219 Nelumbo nucifera
Nn5g30522 Nelumbo nucifera
Nn6g32245 Nelumbo nucifera
Oeu046243.1 Olea europaea
Oeu046245.1 Olea europaea
Oeu047748.1 Olea europaea
Os03g0263900 Oryza sativa ssp. japonica
Peaxi162Scf00287g00127 Petunia axillaris
Peaxi162Scf00640g00034 Petunia axillaris
PGR083G0723 Punica granatum
PGSC0003DMG400003764 Solanum tuberosum
Phvul.007G231400 Phaseolus vulgaris
Potri.002G027900 Populus trichocarpa
Potri.005G234900 Populus trichocarpa
Pp3c1_6530 Physcomitrium patens
Pp3c1_8310 Physcomitrium patens
Pp3c2_26690 Physcomitrium patens
Prupe.1G370600 Prunus persica
Psat0s1558g0040 Pisum sativum
PSO541G0570 Papaver somniferum
PSO675G4036 Papaver somniferum
QL02p010745 Quercus lobata
RcHm_v2.0_Chr6g0302151 Rosa chinensis
Rhsim06G0013900 Rhododendron simsii
Rhsim06G0014000 Rhododendron simsii
Rhsim06G0014300 Rhododendron simsii
Rhsim06G0014800 Rhododendron simsii
Rhsim06G0026300 Rhododendron simsii
Sabra02G0022000 Salix brachista
Sabra05G0181100 Salix brachista
Sc02g0005230 Simmondsia chinensis
Sed0022188 Sechium edule
SEGI_05010 Sequoiadendron giganteum
SGA_v2.0_scaffold326G48749 Striga asiatica
SHI08097 Sapria himalayana
SMO118G0420 Selaginella moellendorffii
SMO331G0035 Selaginella moellendorffii
Solyc04g081050.2 Solanum lycopersicum
Sopen04g034670 Solanum pennellii
Sp1g04000 Schrenkiella parvula
Sp4g14820 Schrenkiella parvula
SpUn0024_0140 Schrenkiella parvula
TAR376G0166 Trochodendron aralioides
TAR376G0643 Trochodendron aralioides
TAR628G0607 Trochodendron aralioides
TAR628G1670 Trochodendron aralioides
THA.LOC104806907 Tarenaya hassleriana
Thecc.08G037800 Theobroma cacao
Thhalv10017699m.g Eutrema salsugineum
TPR.G16935 Trifolium pratense
TWI12G0622 Tripterygium wilfordii
TWI56G0727 Tripterygium wilfordii
unitig_746.g26812 Utricularia gibba
unitig_746.g26813 Utricularia gibba
unitig_899.g15538 Utricularia gibba
unitig_899.g15539 Utricularia gibba
VMungo0720G2667 Vigna mungo
Zm00001eb011630 Zea mays
Zm00001eb026790 Zea mays
Zm00001eb159680 Zea mays
Zm00001eb159690 Zea mays
Zm00001eb398060 Zea mays

User provided reference genes

Program Settings