Gene: Sopen04g034670

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen04g034670
  • Transcript Identifier Sopen04g034670.1
  • Gene Type Coding gene
  • Location Spenn-ch04 : 75720340-75722748 : negative

Gene Family Information

  • ID HOM05D003747
  • #Genes/#Species 184/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen04g034670.1

Descriptions

  • Description Calcium-binding tetratricopeptide family protein | FUNCTIONS IN: binding, zinc ion binding, calcium ion binding | INVOLVED IN: biological_process unknown | LOCATED IN: plasma membrane | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Tetratricopeptide TPR-1 , Tetratricopeptide-like helical , EF-HAND 2 , Zinc finger, ZZ-type , Tetratricopeptide repeat-containing , Tetratricopeptide repeat | BEST Arabidopsis thaliana protein match is: Calcium-binding tetratricopeptide family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT1G05150
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G05150
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT1G05150
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT1G05150
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G32450

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019734 Tetratricopeptide repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR011992 EF-hand domain pair
Mapman id Description
35.1 not assigned.annotated