Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p34710 Brassica napus
A05p41540 Brassica napus
Aa31LG5G17020 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1196 Anthoceros agrestis
Actinidia00296 Actinidia chinensis
Actinidia18506 Actinidia chinensis
AL3G17510 Arabidopsis lyrata
Aqoxy5G02791 Aquilegia oxysepala
Aqoxy7G02168 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.BN91E6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E3SS24 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EP383Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.L2TMJG Arachis hypogaea
AT3G06483 Arabidopsis thaliana
ATR0796G219 Amborella trichopoda
Atru.chr4.3143 Acer truncatum
AUR62002558 Chenopodium quinoa
AUR62029978 Chenopodium quinoa
BcaC05g29821 Brassica carinata
BcaC05g30021 Brassica carinata
BcaC08g45280 Brassica carinata
BolC3t16499H Brassica oleracea
BolC5t34734H Brassica oleracea
BraA03t12649Z Brassica rapa
BraA05t22875Z Brassica rapa
C03p42180 Brassica napus
C05p60740 Brassica napus
CAN.G179.19 Capsicum annuum
CAN.G484.91 Capsicum annuum
CANSAT78G0237 Cannabis sativa
CARHR081010 Cardamine hirsuta
Carub.0003s0594 Capsella rubella
Ca_02357_v3 Cicer arietinum L.
Ca_07250_v3 Cicer arietinum L.
CBR_g238 Chara braunii
Cc00_g15630 Coffea canephora
Cc03_g00160 Coffea canephora
CDE01G0062 Ceratophyllum demersum
CDE02G0044 Ceratophyllum demersum
Cfa015726 Carpinus fangiana
Cfa023761 Carpinus fangiana
Cfa027032 Carpinus fangiana
Ciclev10005215m.g Citrus clementina
CiPaw.01G129700 Carya illinoinensis
CiPaw.02G069500 Carya illinoinensis
ClCG04G007480 Citrullus lanatus
ClCG05G006850 Citrullus lanatus
COL.COLO4_34520 Corchorus olitorius
Cpa.g.sc146.27 Carica papaya
Cre05.g241750 Chlamydomonas reinhardtii
Cre06.g252300 Chlamydomonas reinhardtii
Cre06.g278451 Chlamydomonas reinhardtii
CsaV3_3G015500 Cucumis sativus L.
CsaV3_4G025780 Cucumis sativus L.
CSS0023101 Camellia sinensis var. sinensis
CSS0027704 Camellia sinensis var. sinensis
CSS0050306 Camellia sinensis var. sinensis
DCAR_023405 Daucus carota
Dinv18024 Davidia involucrata
Dinv29512 Davidia involucrata
Duzib151G0200 Durio zibethinus
ECA233G2414 Erigeron canadensis
ECA246G0694 Erigeron canadensis
EL10Ac3g06260 Beta vulgaris
Eucgr.H04122 Eucalyptus grandis
FAN07G0809 Fragaria x ananassa
FAN12G0484 Fragaria x ananassa
FAN17G0291 Fragaria x ananassa
FvH4_4g21480 Fragaria vesca
Glyma.09G079000 Glycine max
Glyma.13G119800 Glycine max
Glyma.14G127500 Glycine max
Glyma.15G188500 Glycine max
Glyma.17G040500 Glycine max
Gohir.A01G036300 Gossypium hirsutum
Gohir.A10G176400 Gossypium hirsutum
Gohir.D01G023600 Gossypium hirsutum
Gohir.D10G183100 Gossypium hirsutum
Gorai.002G032100 Gossypium raimondii
Gorai.011G205200 Gossypium raimondii
GSVIVG01017684001 Vitis vinifera
GSVIVG01031319001 Vitis vinifera
HanXRQChr05g0149271 Helianthus annuus
HanXRQChr07g0194351 Helianthus annuus
Haze_00772 Corylus avellana
Hma1.2p1_2234F.1_g317700 Hydrangea macrophylla
HPP92_001184 Vanilla planifolia
Hund12253 Selenicereus undatus
Lalb_Chr11g0073551 Lupinus albus
Lalb_Chr23g0276061 Lupinus albus
Lj3A840G128 Lonicera japonica
Lj4g0016505 Lotus japonicus
Lj6A700T83 Lonicera japonica
Lj6g0008986 Lotus japonicus
Lsat_1_v5_gn_5_23680 Lactuca sativa
Lsat_1_v5_gn_6_70560 Lactuca sativa
Manes.03G211600 Manihot esculenta
Mapoly0183s0013 Marchantia polymorpha
MBI18_g09643_MAGBIO Magnolia biondii
MBI19_g32733_MAGBIO Magnolia biondii
MCO15G342 Micromonas commoda
MD13G1140800 Malus domestica
MD16G1136800 Malus domestica
Medtr2g045490 Medicago truncatula
Medtr7g024460 Medicago truncatula
MELO3C003205.2 Cucumis melo
MELO3C006749.2 Cucumis melo
Migut.N00003 Erythranthe guttata
MSTRG.21742 Avicennia marina
Nitab4.5_0000895g0180 Nicotiana tabacum
Nitab4.5_0001334g0060 Nicotiana tabacum
Nitab4.5_0003998g0020 Nicotiana tabacum
Nitab4.5_0004046g0020 Nicotiana tabacum
Nn3g21906 Nelumbo nucifera
Nn4g25394 Nelumbo nucifera
Oeu022704.1 Olea europaea
Oeu037626.1 Olea europaea
Os03g0370000 Oryza sativa ssp. japonica
Os07g0637300 Oryza sativa ssp. japonica
Peaxi162Scf00126g01030 Petunia axillaris
Peaxi162Scf00668g00119 Petunia axillaris
PGR004G0380 Punica granatum
PGSC0003DMG400004685 Solanum tuberosum
PGSC0003DMG400013068 Solanum tuberosum
Phvul.009G219900 Phaseolus vulgaris
Phvul.009G220000 Phaseolus vulgaris
Potri.010G002000 Populus trichocarpa
Pp3c15_8270 Physcomitrium patens
Pp3c9_2880 Physcomitrium patens
PRCOL_00002805 Prasinoderma coloniale
PRCOL_00006564 Prasinoderma coloniale
Prupe.1G105800 Prunus persica
Psat1g017520 Pisum sativum
Psat3g179960 Pisum sativum
PSO170G4280 Papaver somniferum
PSO210G4254 Papaver somniferum
PSO357G0471 Papaver somniferum
PSO761G0171 Papaver somniferum
QL06p014168 Quercus lobata
RcHm_v2.0_Chr4g0427421 Rosa chinensis
Rhsim04G0248100 Rhododendron simsii
Sabra10G0001600 Salix brachista
SalBow8G0722 Salvia bowleyana
Sc25g0002190 Simmondsia chinensis
Sed0005057 Sechium edule
Sed0027316 Sechium edule
SEGI_06820 Sequoiadendron giganteum
SGA_v2.0_scaffold157G37383 Striga asiatica
SGA_v2.0_scaffold157G37388 Striga asiatica
SGA_v2.0_scaffold64G22028 Striga asiatica
SHI00051 Sapria himalayana
SMO115G0066 Selaginella moellendorffii
SMO367G0119 Selaginella moellendorffii
Solyc01g057210.3 Solanum lycopersicum
Solyc12g098930.3 Solanum lycopersicum
Sopen01g021750 Solanum pennellii
Sopen12g033680 Solanum pennellii
Sp3g05430 Schrenkiella parvula
TAR365G0780 Trochodendron aralioides
TAR633G1110 Trochodendron aralioides
THA.LOC104798546 Tarenaya hassleriana
THA.LOC104802717 Tarenaya hassleriana
THA.LOC104818862 Tarenaya hassleriana
THA.LOC104827107 Tarenaya hassleriana
Thecc.04G312500 Theobroma cacao
Thhalv10020969m.g Eutrema salsugineum
TPR.G15491 Trifolium pratense
TPR.G39591 Trifolium pratense
TWI73G0221 Tripterygium wilfordii
unitig_699.g19980 Utricularia gibba
unitig_747.g21103 Utricularia gibba
unitig_8.g2888 Utricularia gibba
vmacro06805 Vaccinium macrocarpon
vmacro06806 Vaccinium macrocarpon
vmacro08010 Vaccinium macrocarpon
VMungo0251G3273 Vigna mungo
VMungo1215G3329 Vigna mungo
VMungo1309G1883 Vigna mungo
Zm00001eb018000 Zea mays
Zm00001eb049370 Zea mays
Zm00001eb328730 Zea mays
Zm00001eb392210 Zea mays
Zm00001eb394190 Zea mays
Zm00001eb394790 Zea mays
Zm00001eb400710 Zea mays

User provided reference genes

Program Settings