Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p09590 Brassica napus
A03p50490 Brassica napus
Aa31LG6G250 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2205 Anthoceros agrestis
Actinidia02180 Actinidia chinensis
Actinidia02181 Actinidia chinensis
Actinidia25892 Actinidia chinensis
Ah.07g198590 Amaranthus hybridus
AL7G37110 Arabidopsis lyrata
AL7G37120 Arabidopsis lyrata
Aqoxy3G02726 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5G37N1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.77EYCF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CH87W6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FUBR3I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JF7LYS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MI1D26 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P7CRZW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PS7EZR Arachis hypogaea
AT4G17510 Arabidopsis thaliana
ATR0057G038 Amborella trichopoda
Atru.chr9.1245 Acer truncatum
AUR62007134 Chenopodium quinoa
AUR62018878 Chenopodium quinoa
BcaC06g33562 Brassica carinata
BcaC06g33564 Brassica carinata
BcaC09g51635 Brassica carinata
BcaNung00085 Brassica carinata
BcaNung03459 Brassica carinata
BolC1t01081H Brassica oleracea
BolC7t45339H Brassica oleracea
BolC7t45389H Brassica oleracea
BraA01t00901Z Brassica rapa
BraA03t14138Z Brassica rapa
C01p11160 Brassica napus
C07p48160 Brassica napus
C07p48810 Brassica napus
CAN.G1856.6 Capsicum annuum
CAN.G62.15 Capsicum annuum
CANSAT21G1120 Cannabis sativa
CARHR213500 Cardamine hirsuta
CARHR224210 Cardamine hirsuta
Carub.0007s2388 Capsella rubella
Carub.0007s2389 Capsella rubella
Ca_21985_v3 Cicer arietinum L.
Ca_21998_v3 Cicer arietinum L.
CBR_g30854 Chara braunii
Cc00_g03590 Coffea canephora
Cc01_g05720 Coffea canephora
Cc08_g11880 Coffea canephora
Cc11_g04870 Coffea canephora
CDE11G0530 Ceratophyllum demersum
Cfa012680 Carpinus fangiana
Ciclev10022039m.g Citrus clementina
Ciclev10023537m.g Citrus clementina
Ciclev10024619m.g Citrus clementina
CiPaw.11G084300 Carya illinoinensis
CiPaw.12G048600 Carya illinoinensis
ClCG10G002430 Citrullus lanatus
COL.COLO4_10024 Corchorus olitorius
Cpa.g.sc89.37 Carica papaya
Cre03.g194250 Chlamydomonas reinhardtii
CsaV3_3G002450 Cucumis sativus L.
CSS0020819 Camellia sinensis var. sinensis
DCAR_000641 Daucus carota
DCAR_004606 Daucus carota
Dinv21679 Davidia involucrata
Dinv28848 Davidia involucrata
Dinv39188 Davidia involucrata
Duzib068G0005 Durio zibethinus
Duzib084G0672 Durio zibethinus
ECA240G2285 Erigeron canadensis
EL10Ac5g12313 Beta vulgaris
Eucgr.E00375 Eucalyptus grandis
FAN04G0187 Fragaria x ananassa
FAN08G3606 Fragaria x ananassa
FAN13G2930 Fragaria x ananassa
FAN18G2986 Fragaria x ananassa
FvH4_5g19870 Fragaria vesca
Glyma.01G206200 Glycine max
Glyma.05G063800 Glycine max
Glyma.17G145500 Glycine max
Gohir.A08G166700 Gossypium hirsutum
Gohir.A12G214200 Gossypium hirsutum
Gohir.D08G185500 Gossypium hirsutum
Gohir.D12G216800 Gossypium hirsutum
Gorai.004G194900 Gossypium raimondii
Gorai.008G232400 Gossypium raimondii
GSVIVG01004795001 Vitis vinifera
GSVIVG01005551001 Vitis vinifera
HanXRQChr16g0511641 Helianthus annuus
Haze_07960 Corylus avellana
Hma1.2p1_0821F.1_g224200 Hydrangea macrophylla
HPP92_002099 Vanilla planifolia
HPP92_014688 Vanilla planifolia
Hund14510 Selenicereus undatus
Lalb_Chr00c24g0407441 Lupinus albus
Lalb_Chr00c24g0407451 Lupinus albus
Lalb_Chr00c54g0413631 Lupinus albus
Lalb_Chr05g0214291 Lupinus albus
Lalb_Chr05g0221021 Lupinus albus
Lalb_Chr16g0386511 Lupinus albus
Lj2C226G3 Lonicera japonica
Lj4g0012322 Lotus japonicus
Lsat_1_v5_gn_9_30321 Lactuca sativa
Manes.01G085700 Manihot esculenta
Manes.02G042700 Manihot esculenta
Mapoly0021s0071 Marchantia polymorpha
MBI04_g33725_MAGBIO Magnolia biondii
MBI04_g41760_MAGBIO Magnolia biondii
MCO01G147 Micromonas commoda
MD04G1057500 Malus domestica
MD06G1051100 Malus domestica
Medtr4g100360 Medicago truncatula
MELO3C013914.2 Cucumis melo
Migut.A01026 Erythranthe guttata
MSTRG.12138 Avicennia marina
Nitab4.5_0000618g0150 Nicotiana tabacum
Nitab4.5_0002206g0070 Nicotiana tabacum
Nitab4.5_0006805g0040 Nicotiana tabacum
Nitab4.5_0009301g0040 Nicotiana tabacum
Nn1g00853 Nelumbo nucifera
Oeu031158.1 Olea europaea
Oeu040685.1 Olea europaea
Os02g0654500 Oryza sativa ssp. japonica
Os04g0546400 Oryza sativa ssp. japonica
Os04g0667500 Oryza sativa ssp. japonica
Peaxi162Scf00190g01214 Petunia axillaris
Peaxi162Scf00260g00418 Petunia axillaris
PGR042G3774 Punica granatum
PGSC0003DMG400024158 Solanum tuberosum
PGSC0003DMG400026229 Solanum tuberosum
Phvul.002G000300 Phaseolus vulgaris
Phvul.003G223748 Phaseolus vulgaris
Potri.003G081000 Populus trichocarpa
Pp3c3_8410 Physcomitrium patens
PRCOL_00002923 Prasinoderma coloniale
Prupe.5G061500 Prunus persica
Psat4g074200 Pisum sativum
PSO063G5263 Papaver somniferum
PSO782G4370 Papaver somniferum
QL12p009287 Quercus lobata
QL12p009718 Quercus lobata
RcHm_v2.0_Chr7g0204661 Rosa chinensis
RcHm_v2.0_Chr7g0214021 Rosa chinensis
Sabra03G0052000 Salix brachista
SalBow7G0213 Salvia bowleyana
Sc22g0001060 Simmondsia chinensis
Sed0008996 Sechium edule
SEGI_34669 Sequoiadendron giganteum
SGA_v2.0_scaffold104G30203 Striga asiatica
SGA_v2.0_scaffold199G41234 Striga asiatica
SHI07667 Sapria himalayana
SMO364G0877 Selaginella moellendorffii
Solyc06g060850.3 Solanum lycopersicum
Solyc08g078140.3 Solanum lycopersicum
Sopen06g021000 Solanum pennellii
Sopen08g026630 Solanum pennellii
Sopen08g026640 Solanum pennellii
Sp7g16650 Schrenkiella parvula
TAR375G0973 Trochodendron aralioides
TAR629G3078 Trochodendron aralioides
TAR636G2892 Trochodendron aralioides
THA.LOC104813337 Tarenaya hassleriana
Thecc.03G244800 Theobroma cacao
Thhalv10026137m.g Eutrema salsugineum
TPR.G10445 Trifolium pratense
TPR.G4685 Trifolium pratense
TWI15G0458 Tripterygium wilfordii
TWI15G0745 Tripterygium wilfordii
unitig_0.g1053 Utricularia gibba
vmacro00024 Vaccinium macrocarpon
vmacro00025 Vaccinium macrocarpon
VMungo0251G2614 Vigna mungo
VMungo0251G2656 Vigna mungo
VMungo0331G1368 Vigna mungo
VMungo1215G2603 Vigna mungo
Zm00001eb186330 Zea mays
Zm00001eb249260 Zea mays
Zm00001eb267420 Zea mays
Zm00001eb296140 Zea mays
Zm00001eb389020 Zea mays
Zm00001eb389030 Zea mays
Zm00001eb427920 Zea mays
Zm00001eb433120 Zea mays

User provided reference genes

Program Settings