Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p35040 Brassica napus
A05p41150 Brassica napus
Aa31LG5G17610 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4000 Anthoceros agrestis
Actinidia09489 Actinidia chinensis
Actinidia23728 Actinidia chinensis
Ah.08g213950 Amaranthus hybridus
AL3G18270 Arabidopsis lyrata
Aqoxy5G01520 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0Y3V4L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.27DWCJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DHF5SR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WRN100 Arachis hypogaea
AT3G07050 Arabidopsis thaliana
ATR0315G112 Amborella trichopoda
Atru.chr3.3177 Acer truncatum
AUR62008870 Chenopodium quinoa
AUR62031840 Chenopodium quinoa
AUR62041784 Chenopodium quinoa
BcaB04g21307 Brassica carinata
BcaC05g29759 Brassica carinata
BcaC05g29835 Brassica carinata
BcaC09g47936 Brassica carinata
BNapus_Darmor_BZH_scaffold_109p00270 Brassica napus
BolC1t05572H Brassica oleracea
BolC3t16532H Brassica oleracea
BolC5t34681H Brassica oleracea
BolC9t58687H Brassica oleracea
BraA01t04401Z Brassica rapa
BraA03t12684Z Brassica rapa
BraA05t22841Z Brassica rapa
C03p42620 Brassica napus
C03p83370 Brassica napus
C05p60340 Brassica napus
C09p58230 Brassica napus
CAN.G771.63 Capsicum annuum
CANSAT01G2208 Cannabis sativa
CARHR081630 Cardamine hirsuta
Carub.0003s0656 Capsella rubella
Ca_13246_v3 Cicer arietinum L.
CBR_g19336 Chara braunii
Cc01_g17200 Coffea canephora
CDE11G0127 Ceratophyllum demersum
Ciclev10019400m.g Citrus clementina
CiPaw.04G105900 Carya illinoinensis
ClCG09G007250 Citrullus lanatus
ClCG10G007380 Citrullus lanatus
COL.COLO4_09004 Corchorus olitorius
Cpa.g.sc8.169 Carica papaya
Cre12.g533050 Chlamydomonas reinhardtii
CsaV3_3G006620 Cucumis sativus L.
CsaV3_7G027900 Cucumis sativus L.
CSS0014117 Camellia sinensis var. sinensis
CSS0044814 Camellia sinensis var. sinensis
DCAR_000534 Daucus carota
DCAR_000823 Daucus carota
DCAR_012635 Daucus carota
Dinv04660 Davidia involucrata
Dinv19210 Davidia involucrata
Dinv19211 Davidia involucrata
Duzib133G1322 Durio zibethinus
Duzib138G1284 Durio zibethinus
ECA236G1159 Erigeron canadensis
ECA248G3114 Erigeron canadensis
EL10Ac7g17783 Beta vulgaris
Eucgr.K03607 Eucalyptus grandis
FAN11G3512 Fragaria x ananassa
FAN16G3655 Fragaria x ananassa
FAN21G1197 Fragaria x ananassa
FAN25G2487 Fragaria x ananassa
FvH4_3g29200 Fragaria vesca
Glyma.10G122200 Glycine max
Glyma.20G073900 Glycine max
Gohir.A07G156300 Gossypium hirsutum
Gohir.A09G200268 Gossypium hirsutum
Gohir.A11G136700 Gossypium hirsutum
Gohir.D07G162600 Gossypium hirsutum
Gohir.D11G143000 Gossypium hirsutum
Gorai.001G186200 Gossypium raimondii
Gorai.007G153300 Gossypium raimondii
GSVIVG01028584001 Vitis vinifera
HanXRQChr01g0014631 Helianthus annuus
HanXRQChr10g0287311 Helianthus annuus
Haze_24784 Corylus avellana
Hma1.2p1_2423F.1_g321920 Hydrangea macrophylla
HPP92_023533 Vanilla planifolia
Hund18349 Selenicereus undatus
Hund18351 Selenicereus undatus
Lalb_Chr01g0010741 Lupinus albus
Lalb_Chr03g0036581 Lupinus albus
Lalb_Chr06g0164341 Lupinus albus
Lj1C84T11 Lonicera japonica
Lj2C1133T2 Lonicera japonica
Lj5g0003167 Lotus japonicus
Lj6g0012707 Lotus japonicus
Lsat_1_v5_gn_5_179901 Lactuca sativa
Lsat_1_v5_gn_7_22380 Lactuca sativa
Lsat_1_v5_gn_8_90060 Lactuca sativa
Manes.13G044800 Manihot esculenta
Mapoly0030s0053 Marchantia polymorpha
MBI07_g40345_MAGBIO Magnolia biondii
MCO01G731 Micromonas commoda
MD05G1177400 Malus domestica
MD10G1165800 Malus domestica
Medtr1g048030 Medicago truncatula
Medtr7g056733 Medicago truncatula
MELO3C015786.2 Cucumis melo
MELO3C015809.2 Cucumis melo
MELO3C016474.2 Cucumis melo
Migut.D00526 Erythranthe guttata
Migut.N02264 Erythranthe guttata
MSTRG.18384 Avicennia marina
Nitab4.5_0000866g0120 Nicotiana tabacum
Nitab4.5_0002085g0010 Nicotiana tabacum
Nitab4.5_0003790g0010 Nicotiana tabacum
Nitab4.5_0004922g0050 Nicotiana tabacum
Nn3g19439 Nelumbo nucifera
Nn3g19937 Nelumbo nucifera
Oeu020378.1 Olea europaea
Os01g0375000 Oryza sativa ssp. japonica
Peaxi162Scf00107g01320 Petunia axillaris
Peaxi162Scf00517g00425 Petunia axillaris
PGR044G2123 Punica granatum
PGSC0003DMG400020159 Solanum tuberosum
PGSC0003DMG400028012 Solanum tuberosum
Phvul.007G235000 Phaseolus vulgaris
Potri.002G241100 Populus trichocarpa
Pp3c12_9000 Physcomitrium patens
Pp3c16_1080 Physcomitrium patens
PRCOL_00004835 Prasinoderma coloniale
Prupe.8G204300 Prunus persica
Psat4g007640 Pisum sativum
Psat5g297440 Pisum sativum
PSO170G2973 Papaver somniferum
PSO210G6754 Papaver somniferum
QL07p004899 Quercus lobata
QL07p005142 Quercus lobata
QL07p005175 Quercus lobata
QL12p004452 Quercus lobata
RcHm_v2.0_Chr6g0285031 Rosa chinensis
Rhsim01G0256500 Rhododendron simsii
Rhsim01G0256600 Rhododendron simsii
Rhsim09G0001800 Rhododendron simsii
Rhsim09G0190700 Rhododendron simsii
Sabra02G0183700 Salix brachista
SalBow2G1746 Salvia bowleyana
SalBow3G3449 Salvia bowleyana
SalBow4G0652 Salvia bowleyana
SalBow6G4747 Salvia bowleyana
SalBow7G4783 Salvia bowleyana
SalBow8G2208 Salvia bowleyana
Sc01g0007050 Simmondsia chinensis
Sc09g0009180 Simmondsia chinensis
Sed0007747 Sechium edule
Sed0008284 Sechium edule
SEGI_02950 Sequoiadendron giganteum
SGA_v2.0_scaffold1G00720 Striga asiatica
SGA_v2.0_scaffold8G04649 Striga asiatica
SHI08009 Sapria himalayana
SMO147G0351 Selaginella moellendorffii
Solyc06g083520.3 Solanum lycopersicum
Solyc09g061430.3 Solanum lycopersicum
Sopen06g034900 Solanum pennellii
Sopen09g024250 Solanum pennellii
Sp3g05990 Schrenkiella parvula
TAR362G0926 Trochodendron aralioides
THA.LOC104802677 Tarenaya hassleriana
THA.LOC104820116 Tarenaya hassleriana
Thecc.01G227500 Theobroma cacao
Thhalv10002456m.g Eutrema salsugineum
Thhalv10014729m.g Eutrema salsugineum
Thhalv10020356m.g Eutrema salsugineum
TPR.G19735 Trifolium pratense
TPR.G19744 Trifolium pratense
TPR.G19804 Trifolium pratense
TPR.G19807 Trifolium pratense
TPR.G21886 Trifolium pratense
TPR.G32996 Trifolium pratense
TWI18G0354 Tripterygium wilfordii
TWI36G0757 Tripterygium wilfordii
unitig_8.g3755 Utricularia gibba
vmacro14761 Vaccinium macrocarpon
VMungo0720G3088 Vigna mungo
Zm00001eb049610 Zea mays
Zm00001eb219390 Zea mays
Zm00001eb246430 Zea mays

User provided reference genes

Program Settings