Gene: AT3G07050

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G07050
  • Transcript Identifier AT3G07050.1
  • Gene Type Coding gene
  • Location Chr3 : 2229602-2232279 : negative

Gene Family Information

  • ID HOM05D003690
  • #Genes/#Species 186/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G07050.1
  • symbol NSN1
  • full_name nucleostemin-like 1
  • uniprot L7S4X6

Descriptions

  • Description GTP-binding family protein
  • Computational description GTP-binding family protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Small GTP-binding protein (InterPro:IPR005225), GTP1/OBG (InterPro:IPR006073), GTP-binding protein, HSR1-related (InterPro:IPR002917), GNL3L/Grn1 putative GTPase (InterPro:IPR014813); BEST Arabidopsis thaliana protein match is: GTP-binding family protein (TAIR:AT1G52980.1); Has 11622 Blast hits to 10428 proteins in 1861 species: Archae - 158; Bacteria - 5948; Metazoa - 1715; Fungi - 910; Plants - 502; Viruses - 28; Other Eukaryotes - 2361 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048444
IMP, IGI
Gene Ontologyfloral organ morphogenesis1
GO:0045892
IMP
Gene Ontologynegative regulation of transcription, DNA-templated1
GO:0010077
IMP
Gene Ontologymaintenance of inflorescence meristem identity1
GO:2000024
IMP
Gene Ontologyregulation of leaf development2
GO:0048825
IMP
Gene Ontologycotyledon development2
GO:0045995
IMP
Gene Ontologyregulation of embryonic development2
GO:0045604
IMP
Gene Ontologyregulation of epidermal cell differentiation2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005525
IEA
InterProGTP binding
GO:0003729
IDA
Gene OntologymRNA binding3
GO:0005515
IPI
Gene Ontologyprotein binding4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IDA, HDA
IBA
Gene Ontologynucleolus1 5 6
GO:0005634
ISM
Gene Ontologynucleus
GO:0009506
HDA
Gene Ontologyplasmodesma7
GO:0005829
RCA
Gene Ontologycytosol8

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014813 Guanine nucleotide-binding protein-like 3, N-terminal domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR023179 GTP-binding protein, orthogonal bundle domain superfamily
IPR006073 GTP binding domain
Mapman id Description
17.1.2.2.1.9 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.pre-60S ribosomal subunit nuclear assembly.regulatory GTPase (NUG1/NSN1)