Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p66930 Brassica napus
A10p05210 Brassica napus
Aa31LG1G7910 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1457 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1545 Anthoceros agrestis
Actinidia24401 Actinidia chinensis
Ah.01g013590 Amaranthus hybridus
Ah.02g114000 Amaranthus hybridus
AL1G16600 Arabidopsis lyrata
Aqoxy1G01890 Aquilegia oxysepala
Aqoxy1G01891 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3I6JIA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FDUH0H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I7WXBP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KE2YGW Arachis hypogaea
AT1G06570 Arabidopsis thaliana
ATR0763G164 Amborella trichopoda
ATR0763G191 Amborella trichopoda
Atru.chr6.2045 Acer truncatum
Atru.chr6.2046 Acer truncatum
AUR62015128 Chenopodium quinoa
AUR62016194 Chenopodium quinoa
AUR62017589 Chenopodium quinoa
AUR62035117 Chenopodium quinoa
AUR62035118 Chenopodium quinoa
AUR62039293 Chenopodium quinoa
AUR62039294 Chenopodium quinoa
AUR62039297 Chenopodium quinoa
AUR62039298 Chenopodium quinoa
AUR62039301 Chenopodium quinoa
AUR62039302 Chenopodium quinoa
AUR62044532 Chenopodium quinoa
AUR62044533 Chenopodium quinoa
BcaB02g06780 Brassica carinata
BcaC07g42060 Brassica carinata
BcaNung07075 Brassica carinata
BolC5t29254H Brassica oleracea
BolC8t52642H Brassica oleracea
BraA09t42028Z Brassica rapa
BraA10t42788Z Brassica rapa
C05p04810 Brassica napus
C08p51160 Brassica napus
CAN.G7.15 Capsicum annuum
CANSAT64G0060 Cannabis sativa
CANSAT64G0777 Cannabis sativa
CANSAT64G2396 Cannabis sativa
CARHR006180 Cardamine hirsuta
CARHR006190 Cardamine hirsuta
Carub.0001s0594 Capsella rubella
Ca_06264_v3 Cicer arietinum L.
Ca_30265_v3 Cicer arietinum L.
CBR_g41741 Chara braunii
CBR_g46667 Chara braunii
CBR_g8495 Chara braunii
Cc05_g01440 Coffea canephora
CDE02G2922 Ceratophyllum demersum
CDE05G0951 Ceratophyllum demersum
Cfa023357 Carpinus fangiana
Cfa023358 Carpinus fangiana
Ciclev10031587m.g Citrus clementina
CiPaw.03G191900 Carya illinoinensis
ClCG11G016540 Citrullus lanatus
COL.COLO4_19675 Corchorus olitorius
COL.COLO4_20758 Corchorus olitorius
COL.COLO4_38400 Corchorus olitorius
COL.COLO4_38401 Corchorus olitorius
COL.COLO4_38402 Corchorus olitorius
Cpa.g.sc50.111 Carica papaya
Cre09.g398993 Chlamydomonas reinhardtii
Cre09.g399030 Chlamydomonas reinhardtii
CsaV3_4G032000 Cucumis sativus L.
CSS0042622 Camellia sinensis var. sinensis
DCAR_023045 Daucus carota
Dinv07089 Davidia involucrata
Dinv07706 Davidia involucrata
Dinv21956 Davidia involucrata
ECA233G6193 Erigeron canadensis
ECA238G4715 Erigeron canadensis
EL10Ac9g22831 Beta vulgaris
EL10Ac9g22832 Beta vulgaris
Eucgr.A02022 Eucalyptus grandis
Eucgr.A02023 Eucalyptus grandis
Eucgr.A02024 Eucalyptus grandis
FAN02G0649 Fragaria x ananassa
FAN05G2105 Fragaria x ananassa
FAN09G3261 Fragaria x ananassa
FAN10G3644 Fragaria x ananassa
FAN14G2563 Fragaria x ananassa
FAN18G0200 Fragaria x ananassa
FAN18G2996 Fragaria x ananassa
FAN21G3810 Fragaria x ananassa
FAN25G1183 Fragaria x ananassa
FvH4_5g31130 Fragaria vesca
FvH4_6g00910 Fragaria vesca
FvH4_6g38670 Fragaria vesca
Glyma.02G284600 Glycine max
Glyma.14G030400 Glycine max
Gohir.A07G080400 Gossypium hirsutum
Gohir.D07G086000 Gossypium hirsutum
Gorai.001G092000 Gossypium raimondii
GSVIVG01013079001 Vitis vinifera
GSVIVG01020837001 Vitis vinifera
HanXRQChr02g0055101 Helianthus annuus
HanXRQChr14g0451901 Helianthus annuus
Haze_13556 Corylus avellana
Haze_25279 Corylus avellana
Hma1.2p1_0033F.1_g021200 Hydrangea macrophylla
HPP92_002268 Vanilla planifolia
Hund22282 Selenicereus undatus
Lalb_Chr04g0248921 Lupinus albus
Lj8C8T1 Lonicera japonica
Lj8C8T3 Lonicera japonica
LjContig00049g0013493 Lotus japonicus
Lsat_1_v5_gn_2_96721 Lactuca sativa
Lsat_1_v5_gn_6_42781 Lactuca sativa
Manes.02G088900 Manihot esculenta
Mapoly0126s0038 Marchantia polymorpha
MBI18_g13605_MAGBIO Magnolia biondii
MCO11G070 Micromonas commoda
MD05G1024100 Malus domestica
MD05G1024200 Malus domestica
MD09G1148400 Malus domestica
MD13G1156600 Malus domestica
MD17G1134800 Malus domestica
Medtr1g022325 Medicago truncatula
Medtr5g090980 Medicago truncatula
Medtr5g090990 Medicago truncatula
Medtr5g091060 Medicago truncatula
MELO3C022961.2 Cucumis melo
Migut.M00071 Erythranthe guttata
MSTRG.14903 Avicennia marina
Nitab4.5_0000006g0440 Nicotiana tabacum
Nitab4.5_0002201g0040 Nicotiana tabacum
Nn7g37943 Nelumbo nucifera
Oeu051389.1 Olea europaea
Os02g0168100 Oryza sativa ssp. japonica
Peaxi162Scf00416g00004 Petunia axillaris
PGR042G2748 Punica granatum
PGSC0003DMG400017420 Solanum tuberosum
PGSC0003DMG400017707 Solanum tuberosum
Phvul.008G194300 Phaseolus vulgaris
Potri.002G057400 Populus trichocarpa
Potri.005G205200 Populus trichocarpa
Pp3c1_27020 Physcomitrium patens
Pp3c2_15470 Physcomitrium patens
PRCOL_00001771 Prasinoderma coloniale
Prupe.3G177700 Prunus persica
Psat2g017880 Pisum sativum
PSO144G0168 Papaver somniferum
PSO170G5322 Papaver somniferum
PSO210G1881 Papaver somniferum
PSO210G5105 Papaver somniferum
PSO210G6115 Papaver somniferum
PSO675G0095 Papaver somniferum
PSO675G5654 Papaver somniferum
QL08p044989 Quercus lobata
RcHm_v2.0_Chr2g0152131 Rosa chinensis
RcHm_v2.0_Chr2g0152141 Rosa chinensis
Rhsim07G0197900 Rhododendron simsii
Sabra02G0046800 Salix brachista
SalBow1G2057 Salvia bowleyana
Sc19g0001760 Simmondsia chinensis
Sed0005423 Sechium edule
SEGI_30126 Sequoiadendron giganteum
SGA_v2.0_scaffold73G24479 Striga asiatica
SMO118G0557 Selaginella moellendorffii
SMO358G0369 Selaginella moellendorffii
Solyc05g041200.4 Solanum lycopersicum
Solyc07g045050.3 Solanum lycopersicum
Sopen05g024810 Solanum pennellii
Sopen07g023610 Solanum pennellii
Sp1g05330 Schrenkiella parvula
TAR626G0427 Trochodendron aralioides
THA.LOC104815838 Tarenaya hassleriana
Thecc.01G168600 Theobroma cacao
Thecc.01G168800 Theobroma cacao
Thecc.01G169100 Theobroma cacao
Thhalv10007634m.g Eutrema salsugineum
TPR.G10161 Trifolium pratense
TPR.G10168 Trifolium pratense
TPR.G25540 Trifolium pratense
TWI59G0698 Tripterygium wilfordii
unitig_899.g15456 Utricularia gibba
vmacro04781 Vaccinium macrocarpon
VMungo0647G2026 Vigna mungo
Zm00001eb232960 Zea mays
Zm00001eb304950 Zea mays

User provided reference genes

Program Settings