Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p35600 Brassica napus
A06p40940 Brassica napus
A09p03500 Brassica napus
Aa31LG2G4970 Aethionema arabicum
Aa31LG2G4980 Aethionema arabicum
Actinidia06004 Actinidia chinensis
Actinidia16938 Actinidia chinensis
Actinidia25101 Actinidia chinensis
Actinidia35766 Actinidia chinensis
Actinidia36105 Actinidia chinensis
Actinidia36106 Actinidia chinensis
Actinidia39401 Actinidia chinensis
Ah.10g038310 Amaranthus hybridus
Ah.16g100890 Amaranthus hybridus
AL5G17140 Arabidopsis lyrata
Aqoxy3G01151 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.MY3LMM Arachis hypogaea
AT3G27700 Arabidopsis thaliana
ATR0568G013 Amborella trichopoda
Atru.chr6.2272 Acer truncatum
Atru.chr6.2364 Acer truncatum
Atru.chr6.2365 Acer truncatum
Atru.chr6.2366 Acer truncatum
AUR62009456 Chenopodium quinoa
AUR62023138 Chenopodium quinoa
BcaB07g30148 Brassica carinata
BcaC03g17479 Brassica carinata
BcaC06g30963 Brassica carinata
BolC2t11504H Brassica oleracea
BolC7t44200H Brassica oleracea
BraA02t08562Z Brassica rapa
BraA06t27015Z Brassica rapa
BraA09t35988Z Brassica rapa
C02p54430 Brassica napus
C07p36880 Brassica napus
CANSAT64G1680 Cannabis sativa
CARHR149170 Cardamine hirsuta
Carub.0005s0625 Capsella rubella
Ca_04156_v3 Cicer arietinum L.
Ca_06248_v3 Cicer arietinum L.
Ca_29533_v3 Cicer arietinum L.
Ca_31040_v3 Cicer arietinum L.
CBR_g4653 Chara braunii
CBR_g57010 Chara braunii
Cc07_g01820 Coffea canephora
CDE04G0669 Ceratophyllum demersum
CDE06G2242 Ceratophyllum demersum
Cfa007935 Carpinus fangiana
Ciclev10014173m.g Citrus clementina
CiPaw.03G042300 Carya illinoinensis
CiPaw.04G027900 Carya illinoinensis
CiPaw.04G028000 Carya illinoinensis
ClCG10G013970 Citrullus lanatus
COL.COLO4_29094 Corchorus olitorius
Cpa.g.sc108.55 Carica papaya
Cpa.g.sc108.56 Carica papaya
CsaV3_3G042720 Cucumis sativus L.
CSS0034547 Camellia sinensis var. sinensis
CSS0046674 Camellia sinensis var. sinensis
CSS0048500 Camellia sinensis var. sinensis
DCAR_011248 Daucus carota
Dinv33450 Davidia involucrata
Dinv35101 Davidia involucrata
Duzib187G1135 Durio zibethinus
Duzib264G1220 Durio zibethinus
ECA238G4588 Erigeron canadensis
EL10Ac2g04412 Beta vulgaris
Eucgr.I01752 Eucalyptus grandis
FAN02G0206 Fragaria x ananassa
FAN05G1583 Fragaria x ananassa
FAN05G2840 Fragaria x ananassa
FAN09G1146 Fragaria x ananassa
FAN14G5704 Fragaria x ananassa
FvH4_6g51350 Fragaria vesca
Glyma.05G004100 Glycine max
Glyma.19G004000 Glycine max
Gohir.A05G356200 Gossypium hirsutum
Gohir.A07G222600 Gossypium hirsutum
Gohir.A09G028600 Gossypium hirsutum
Gohir.A11G066633 Gossypium hirsutum
Gohir.A11G066766 Gossypium hirsutum
Gohir.D04G057000 Gossypium hirsutum
Gohir.D07G229300 Gossypium hirsutum
Gohir.D09G028200 Gossypium hirsutum
Gohir.D11G070750 Gossypium hirsutum
Gorai.001G264400 Gossypium raimondii
Gorai.006G032800 Gossypium raimondii
Gorai.007G075900 Gossypium raimondii
Gorai.012G063700 Gossypium raimondii
GSVIVG01032423001 Vitis vinifera
HanXRQChr07g0198951 Helianthus annuus
HanXRQChr09g0255101 Helianthus annuus
HanXRQChr14g0450511 Helianthus annuus
Haze_14709 Corylus avellana
Haze_14727 Corylus avellana
Hma1.2p1_1291F.1_g273550 Hydrangea macrophylla
HPP92_000306 Vanilla planifolia
Hund13661 Selenicereus undatus
Hund13662 Selenicereus undatus
Hund16251 Selenicereus undatus
Lalb_Chr06g0175811 Lupinus albus
Lj2g0025004 Lotus japonicus
Lj4A88G37 Lonicera japonica
Lj4C88T15 Lonicera japonica
Lsat_1_v5_gn_2_91520 Lactuca sativa
Lsat_1_v5_gn_4_183501 Lactuca sativa
Manes.15G166100 Manihot esculenta
Manes.17G115600 Manihot esculenta
Mapoly0078s0024 Marchantia polymorpha
MBI10_g00730_MAGBIO Magnolia biondii
MCO04G343 Micromonas commoda
MD09G1028400 Malus domestica
MD17G1029900 Malus domestica
Medtr2g449870 Medicago truncatula
Medtr2g449940 Medicago truncatula
Medtr2g449950 Medicago truncatula
Medtr2g449970 Medicago truncatula
Medtr6g004970 Medicago truncatula
MELO3C009984.2 Cucumis melo
Migut.H00084 Erythranthe guttata
MSTRG.24033 Avicennia marina
MSTRG.3149 Avicennia marina
Nitab4.5_0000419g0080 Nicotiana tabacum
Nitab4.5_0002385g0010 Nicotiana tabacum
Nitab4.5_0002682g0090 Nicotiana tabacum
Nitab4.5_0006802g0070 Nicotiana tabacum
Nn3g16761 Nelumbo nucifera
Nn4g22660 Nelumbo nucifera
Oeu043319.1 Olea europaea
Oeu063478.1 Olea europaea
Os04g0394300 Oryza sativa ssp. japonica
Peaxi162Scf00129g01426 Petunia axillaris
Peaxi162Scf00417g00004 Petunia axillaris
Peaxi162Scf00700g00429 Petunia axillaris
PGR083G1229 Punica granatum
PGR142G1836 Punica granatum
PGSC0003DMG400004231 Solanum tuberosum
PGSC0003DMG400012599 Solanum tuberosum
Phvul.004G007600 Phaseolus vulgaris
Potri.001G351532 Populus trichocarpa
Potri.017G072100 Populus trichocarpa
Pp3c1_17760 Physcomitrium patens
Pp3c1_20440 Physcomitrium patens
Pp3c2_21410 Physcomitrium patens
Pp3c2_22950 Physcomitrium patens
Prupe.3G289600 Prunus persica
Prupe.3G290100 Prunus persica
Psat1g054960 Pisum sativum
PSO017G6373 Papaver somniferum
PSO063G4513 Papaver somniferum
PSO832G3537 Papaver somniferum
QL02p075116 Quercus lobata
RcHm_v2.0_Chr2g0173051 Rosa chinensis
Rhsim08G0051400 Rhododendron simsii
Sabra16G0231200 Salix brachista
Sabra17G0060300 Salix brachista
SalBow6G0256 Salvia bowleyana
Sc03g0007560 Simmondsia chinensis
Sed0000390 Sechium edule
Sed0015855 Sechium edule
SEGI_07755 Sequoiadendron giganteum
SEGI_17646 Sequoiadendron giganteum
SGA_v2.0_scaffold135G34898 Striga asiatica
SGA_v2.0_scaffold481G52311 Striga asiatica
SHI22307 Sapria himalayana
SHI22312 Sapria himalayana
SMO367G0495 Selaginella moellendorffii
Solyc01g058690.1 Solanum lycopersicum
Solyc02g086510.4 Solanum lycopersicum
Solyc12g035250.3 Solanum lycopersicum
Sopen01g024710 Solanum pennellii
Sopen02g031230 Solanum pennellii
Sopen02g031240 Solanum pennellii
Sopen12g014870 Solanum pennellii
Sp2g16820 Schrenkiella parvula
TAR622G0533 Trochodendron aralioides
TAR629G1826 Trochodendron aralioides
THA.LOC104805377 Tarenaya hassleriana
THA.LOC104823948 Tarenaya hassleriana
Thecc.04G015700 Theobroma cacao
Thhalv10003632m.g Eutrema salsugineum
TPR.G14089 Trifolium pratense
TWI56G0063 Tripterygium wilfordii
unitig_0.g1601 Utricularia gibba
unitig_748.g6986 Utricularia gibba
vmacro18276 Vaccinium macrocarpon
VMungo0464G0503 Vigna mungo
Zm00001eb085110 Zea mays

User provided reference genes

Program Settings