Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p34730 Brassica napus
A05p41500 Brassica napus
Aa31LG5G17060 Aethionema arabicum
Aa31LG5G17070 Aethionema arabicum
Aa31LG5G17080 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3595 Anthoceros agrestis
Actinidia09313 Actinidia chinensis
Actinidia13607 Actinidia chinensis
Ah.05g175250 Amaranthus hybridus
Ah.08g217720 Amaranthus hybridus
AL3G17560 Arabidopsis lyrata
Aqoxy7G00839 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1899LM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.6U43LH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DI5547 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EJWE4G Arachis hypogaea
AT3G06530 Arabidopsis thaliana
ATR0057G101 Amborella trichopoda
Atru.chr1.903 Acer truncatum
Atru.chr1.904 Acer truncatum
AUR62001342 Chenopodium quinoa
AUR62025663 Chenopodium quinoa
BolC3t16501H Brassica oleracea
BolC5t34134H Brassica oleracea
BolC5t34135H Brassica oleracea
BolC5t34730H Brassica oleracea
BraA03t12653Z Brassica rapa
BraA05t22871Z Brassica rapa
C03p42210 Brassica napus
C05p60700 Brassica napus
CAN.G485.19 Capsicum annuum
CAN.G485.20 Capsicum annuum
CANSAT56G2655 Cannabis sativa
CANSAT56G4028 Cannabis sativa
CARHR081080 Cardamine hirsuta
Carub.0003s0599 Capsella rubella
Ca_11520_v3 Cicer arietinum L.
Ca_26483_v3 Cicer arietinum L.
CBR_g19186 Chara braunii
Cc02_g04680 Coffea canephora
CDE04G1406 Ceratophyllum demersum
CDE12G0325 Ceratophyllum demersum
Cfa013573 Carpinus fangiana
Cfa023294 Carpinus fangiana
Ciclev10004122m.g Citrus clementina
CiPaw.07G185400 Carya illinoinensis
ClCG07G016940 Citrullus lanatus
ClCG07G016950 Citrullus lanatus
COL.COLO4_37344 Corchorus olitorius
Cpa.g.sc13.258 Carica papaya
Cpa.g.sc13.260 Carica papaya
Cpa.g.sc13.262 Carica papaya
Cre12.g548000 Chlamydomonas reinhardtii
CsaV3_4G004170 Cucumis sativus L.
CSS0004894 Camellia sinensis var. sinensis
CSS0040773 Camellia sinensis var. sinensis
DCAR_027698 Daucus carota
Dinv06589 Davidia involucrata
Dinv06595 Davidia involucrata
Duzib205G0263 Durio zibethinus
ECA233G0107 Erigeron canadensis
EL10Ac7g18161 Beta vulgaris
Eucgr.A02921 Eucalyptus grandis
FAN01G1639 Fragaria x ananassa
FAN03G1177 Fragaria x ananassa
FAN06G2502 Fragaria x ananassa
FAN06G2869 Fragaria x ananassa
FAN06G4468 Fragaria x ananassa
FAN10G2285 Fragaria x ananassa
FvH4_7g26990 Fragaria vesca
Glyma.02G290200 Glycine max
Glyma.03G109700 Glycine max
Glyma.08G286950 Glycine max
Glyma.14G024600 Glycine max
Gohir.A07G043301 Gossypium hirsutum
Gohir.D03G110801 Gossypium hirsutum
Gohir.D07G047701 Gossypium hirsutum
Gorai.001G050900 Gossypium raimondii
Gorai.003G117300 Gossypium raimondii
GSVIVG01013976001 Vitis vinifera
HanXRQChr05g0139491 Helianthus annuus
Haze_22192 Corylus avellana
Hma1.2p1_1404F.1_g281290 Hydrangea macrophylla
Hma1.2p1_1404F.1_g281300 Hydrangea macrophylla
Hma1.2p1_1580F.1_g291890 Hydrangea macrophylla
HPP92_014907 Vanilla planifolia
HPP92_014933 Vanilla planifolia
HPP92_014934 Vanilla planifolia
Hund18595 Selenicereus undatus
Lalb_Chr04g0248471 Lupinus albus
Lj8C46T11 Lonicera japonica
LjContig00272g0012466 Lotus japonicus
Lsat_1_v5_gn_1_161 Lactuca sativa
Lsat_1_v5_gn_8_9561 Lactuca sativa
Manes.14G038400 Manihot esculenta
Mapoly0043s0008 Marchantia polymorpha
MBI01_g18556_MAGBIO Magnolia biondii
MBI01_g18557_MAGBIO Magnolia biondii
MBI01_g24305_MAGBIO Magnolia biondii
MBI01_g30817_MAGBIO Magnolia biondii
MBI01_g47166_MAGBIO Magnolia biondii
MBI01_g47186_MAGBIO Magnolia biondii
MBI01_g47337_MAGBIO Magnolia biondii
MBI05_g26487_MAGBIO Magnolia biondii
MBI05_g26488_MAGBIO Magnolia biondii
MBI05_g28033_MAGBIO Magnolia biondii
MBI13_g17200_MAGBIO Magnolia biondii
MBI13_g19469_MAGBIO Magnolia biondii
MBI13_g42134_MAGBIO Magnolia biondii
MBI13_g48198_MAGBIO Magnolia biondii
MCO07G739 Micromonas commoda
MD07G1249300 Malus domestica
Medtr5g092290 Medicago truncatula
Medtr5g092370 Medicago truncatula
MELO3C017650.2 Cucumis melo
Migut.F01200 Erythranthe guttata
Migut.O00372 Erythranthe guttata
MSTRG.139 Avicennia marina
Nitab4.5_0003173g0040 Nicotiana tabacum
Nitab4.5_0005495g0020 Nicotiana tabacum
Nitab4.5_0005495g0030 Nicotiana tabacum
Nn1g00886 Nelumbo nucifera
Oeu013973.1 Olea europaea
Oeu055354.1 Olea europaea
Oeu060859.1 Olea europaea
Os04g0548300 Oryza sativa ssp. japonica
Peaxi162Scf00271g00727 Petunia axillaris
PGR042G0622 Punica granatum
PGSC0003DMG400010751 Solanum tuberosum
Phvul.008G266400 Phaseolus vulgaris
Potri.003G151500 Populus trichocarpa
Pp3c3_10580 Physcomitrium patens
PRCOL_00000377 Prasinoderma coloniale
Prupe.2G273000 Prunus persica
Psat0s4851g0040 Pisum sativum
Psat0s7016g0120 Pisum sativum
Psat1g036520 Pisum sativum
Psat2g013320 Pisum sativum
Psat5g053280 Pisum sativum
Psat5g116160 Pisum sativum
PSO675G9104 Papaver somniferum
PSO732G0142 Papaver somniferum
PSO782G1165 Papaver somniferum
PSO782G1733 Papaver somniferum
QL09p028029 Quercus lobata
RcHm_v2.0_Chr1g0354361 Rosa chinensis
RcHm_v2.0_Chr1g0373711 Rosa chinensis
RcHm_v2.0_Chr1g0373721 Rosa chinensis
RcHm_v2.0_Chr3g0476201 Rosa chinensis
RcHm_v2.0_Chr5g0059891 Rosa chinensis
Rhsim03G0091600 Rhododendron simsii
Rhsim03G0111100 Rhododendron simsii
Rhsim03G0161600 Rhododendron simsii
Sabra03G0109700 Salix brachista
SalBow2G0990 Salvia bowleyana
SalBow2G2772 Salvia bowleyana
Sc20g0000680 Simmondsia chinensis
Sed0010855 Sechium edule
SEGI_01219 Sequoiadendron giganteum
SEGI_04827 Sequoiadendron giganteum
SEGI_27748 Sequoiadendron giganteum
SEGI_38341 Sequoiadendron giganteum
SGA_v2.0_scaffold56G19917 Striga asiatica
SHI14045 Sapria himalayana
SHI14048 Sapria himalayana
SHI14049 Sapria himalayana
SHI14050 Sapria himalayana
SHI14054 Sapria himalayana
SMO142G0017 Selaginella moellendorffii
SMO142G0060 Selaginella moellendorffii
SMO358G0141 Selaginella moellendorffii
SMO358G0582 Selaginella moellendorffii
Solyc03g093480.3 Solanum lycopersicum
Solyc07g040661.1 Solanum lycopersicum
Sopen03g024310 Solanum pennellii
Sopen12g012690 Solanum pennellii
Sp3g05470 Schrenkiella parvula
TAR375G0563 Trochodendron aralioides
THA.LOC104802945 Tarenaya hassleriana
THA.LOC104803128 Tarenaya hassleriana
THA.LOC104803129 Tarenaya hassleriana
THA.LOC104811536 Tarenaya hassleriana
Thecc.03G149300 Theobroma cacao
Thhalv10019871m.g Eutrema salsugineum
TPR.G1178 Trifolium pratense
TPR.G35189 Trifolium pratense
TWI23G0434 Tripterygium wilfordii
unitig_62.g23920 Utricularia gibba
vmacro06834 Vaccinium macrocarpon
VMungo0251G1425 Vigna mungo
Zm00001eb123540 Zea mays

User provided reference genes

Program Settings