Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p07060 Brassica napus
A10p28480 Brassica napus
Aa31LG11G2580 Aethionema arabicum
Aa31LG3G18350 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2062 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.280 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5155 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.5157 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1657 Anthoceros agrestis
Actinidia18952 Actinidia chinensis
Ah.11g044090 Amaranthus hybridus
AL6G18600 Arabidopsis lyrata
AL6G34280 Arabidopsis lyrata
Aqoxy3G00433 Aquilegia oxysepala
Aqoxy3G03860 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B1KVMA Arachis hypogaea
AT5G08190 Arabidopsis thaliana
AT5G23090 Arabidopsis thaliana
ATR0815G014 Amborella trichopoda
Atru.chr9.708 Acer truncatum
AUR62020662 Chenopodium quinoa
AUR62028068 Chenopodium quinoa
AUR62044392 Chenopodium quinoa
BcaB01g05623 Brassica carinata
BcaB04g19888 Brassica carinata
BcaB08g37276 Brassica carinata
BcaC03g13209 Brassica carinata
BcaC03g13210 Brassica carinata
BcaC04g23480 Brassica carinata
BolC2t06306H Brassica oleracea
BolC3t12948H Brassica oleracea
BolC9t53704H Brassica oleracea
BolC9t59622H Brassica oleracea
BraA02t04945Z Brassica rapa
BraA09t36354Z Brassica rapa
BraA10t44896Z Brassica rapa
C02p03450 Brassica napus
C09p07910 Brassica napus
C09p68750 Brassica napus
CAN.G587.71 Capsicum annuum
CAN.G781.4 Capsicum annuum
CANSAT80G0220 Cannabis sativa
CARHR190440 Cardamine hirsuta
CARHR204990 Cardamine hirsuta
Carub.0006s0709 Capsella rubella
Carub.0006s2088 Capsella rubella
Ca_02523_v3 Cicer arietinum L.
CBR_g40782 Chara braunii
Cc04_g07710 Coffea canephora
CDE04G0696 Ceratophyllum demersum
CDE06G1451 Ceratophyllum demersum
Cfa019843 Carpinus fangiana
Ciclev10022641m.g Citrus clementina
CiPaw.16G082800 Carya illinoinensis
ClCG06G015130 Citrullus lanatus
COL.COLO4_32191 Corchorus olitorius
Cpa.g.sc13.75 Carica papaya
Cre17.g739450 Chlamydomonas reinhardtii
CsaV3_1G003510 Cucumis sativus L.
CSS0003476 Camellia sinensis var. sinensis
CSS0016530 Camellia sinensis var. sinensis
CSS0029845 Camellia sinensis var. sinensis
DCAR_023145 Daucus carota
Dinv36880 Davidia involucrata
Dinv38604 Davidia involucrata
Duzib068G0274 Durio zibethinus
Duzib084G1140 Durio zibethinus
Duzib205G0101 Durio zibethinus
ECA232G4761 Erigeron canadensis
ECA247G3802 Erigeron canadensis
EL10Ac2g03673 Beta vulgaris
Eucgr.B00669 Eucalyptus grandis
FAN08G2954 Fragaria x ananassa
FAN13G1448 Fragaria x ananassa
FAN18G1277 Fragaria x ananassa
FvH4_5g12901 Fragaria vesca
Glyma.04G145000 Glycine max
Glyma.05G015100 Glycine max
Glyma.06G209000 Glycine max
Glyma.17G123600 Glycine max
Gohir.A07G056700 Gossypium hirsutum
Gohir.A09G244200 Gossypium hirsutum
Gohir.D07G061000 Gossypium hirsutum
Gohir.D09G245100 Gossypium hirsutum
Gorai.001G064700 Gossypium raimondii
Gorai.006G269400 Gossypium raimondii
GSVIVG01008215001 Vitis vinifera
HanXRQChr04g0109851 Helianthus annuus
HanXRQChr08g0228481 Helianthus annuus
HanXRQChr09g0269851 Helianthus annuus
HanXRQChr09g0269861 Helianthus annuus
HanXRQChr14g0436301 Helianthus annuus
HanXRQChr16g0502041 Helianthus annuus
Haze_18574 Corylus avellana
Hma1.2p1_0340F.1_g130100 Hydrangea macrophylla
Hma1.2p1_0595F.1_g186080 Hydrangea macrophylla
HPP92_003792 Vanilla planifolia
Hund03255 Selenicereus undatus
Hund19381 Selenicereus undatus
Lalb_Chr07g0178501 Lupinus albus
Lalb_Chr08g0235361 Lupinus albus
Lalb_Chr13g0302501 Lupinus albus
Lalb_Chr23g0274121 Lupinus albus
Lj1g0005945 Lotus japonicus
Lj4g0027798 Lotus japonicus
Lj5A141T87 Lonicera japonica
Lj9A433T100 Lonicera japonica
Lsat_1_v5_gn_1_15700 Lactuca sativa
Lsat_1_v5_gn_4_111820 Lactuca sativa
Manes.01G022100 Manihot esculenta
Manes.05G117400 Manihot esculenta
Mapoly0053s0055 Marchantia polymorpha
MBI10_g18305_MAGBIO Magnolia biondii
MBI16_g06573_MAGBIO Magnolia biondii
MCO15G398 Micromonas commoda
MD06G1209300 Malus domestica
MD14G1219800 Malus domestica
Medtr2g056000 Medicago truncatula
Medtr4g112380 Medicago truncatula
MELO3C017276.2 Cucumis melo
Migut.D01587 Erythranthe guttata
MSTRG.9000 Avicennia marina
Nn3g17669 Nelumbo nucifera
Nn4g23671 Nelumbo nucifera
Oeu001006.1 Olea europaea
Oeu008246.1 Olea europaea
Oeu019656.1 Olea europaea
Oeu031816.1 Olea europaea
Os08g0383700 Oryza sativa ssp. japonica
Peaxi162Scf00013g00829 Petunia axillaris
Peaxi162Scf00017g03040 Petunia axillaris
Peaxi162Scf00119g00126 Petunia axillaris
PGR083G0538 Punica granatum
PGSC0003DMG400004076 Solanum tuberosum
PGSC0003DMG400023065 Solanum tuberosum
PGSC0003DMG401024603 Solanum tuberosum
Phvul.003G179300 Phaseolus vulgaris
Phvul.009G201500 Phaseolus vulgaris
Potri.012G058200 Populus trichocarpa
Potri.015G052800 Populus trichocarpa
Pp3c10_17500 Physcomitrium patens
Pp3c3_25870 Physcomitrium patens
PRCOL_00007010 Prasinoderma coloniale
Prupe.5G214400 Prunus persica
Psat1g027000 Pisum sativum
Psat4g043760 Pisum sativum
PSO017G5533 Papaver somniferum
PSO063G2115 Papaver somniferum
QL10p022343 Quercus lobata
RcHm_v2.0_Chr7g0184331 Rosa chinensis
RhsimUnG0225600 Rhododendron simsii
Sabra12G0041700 Salix brachista
Sabra15G0077200 Salix brachista
SalBow1G3465 Salvia bowleyana
Sc09g0007430 Simmondsia chinensis
Sc23g0004420 Simmondsia chinensis
Sed0008282 Sechium edule
Sed0024201 Sechium edule
SEGI_05393 Sequoiadendron giganteum
SEGI_10246 Sequoiadendron giganteum
SEGI_30683 Sequoiadendron giganteum
SGA_v2.0_scaffold33G13364 Striga asiatica
SGA_v2.0_scaffold33G13365 Striga asiatica
SMO353G0032 Selaginella moellendorffii
Solyc03g114400.3 Solanum lycopersicum
Solyc06g069310.3 Solanum lycopersicum
Solyc12g038390.1 Solanum lycopersicum
Sopen03g033500 Solanum pennellii
Sopen06g026570 Solanum pennellii
Sopen12g018530 Solanum pennellii
Sp2g24030 Schrenkiella parvula
Sp6g34750 Schrenkiella parvula
TAR371G0504 Trochodendron aralioides
TAR622G1039 Trochodendron aralioides
TAR702G0002 Trochodendron aralioides
THA.LOC104800935 Tarenaya hassleriana
THA.LOC104819383 Tarenaya hassleriana
Thecc.03G115000 Theobroma cacao
Thhalv10005056m.g Eutrema salsugineum
Thhalv10014894m.g Eutrema salsugineum
TPR.G2820 Trifolium pratense
TWI15G0382 Tripterygium wilfordii
TWI60G0348 Tripterygium wilfordii
TWI81G0966 Tripterygium wilfordii
unitig_21.g20428 Utricularia gibba
unitig_744.g24408 Utricularia gibba
vmacro12201 Vaccinium macrocarpon
vmacro17645 Vaccinium macrocarpon
VMungo1215G3031 Vigna mungo
VMungo1309G2871 Vigna mungo
Zm00001eb042490 Zea mays
Zm00001eb178500 Zea mays

User provided reference genes

Program Settings