Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p26360 Brassica napus
A06p13070 Brassica napus
A08p37500 Brassica napus
A09p22480 Brassica napus
A09p60550 Brassica napus
A09p60560 Brassica napus
Aa31LG7G2010 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5210 Anthoceros agrestis
Actinidia12611 Actinidia chinensis
AL1G29390 Arabidopsis lyrata
Aqoxy1G01847 Aquilegia oxysepala
Aqoxy4G00144 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FE4UN0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JM4QTS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T44SL9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UIE2A5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y31H1M Arachis hypogaea
AT1G17160 Arabidopsis thaliana
ATR0256G001 Amborella trichopoda
Atru.chr2.1822 Acer truncatum
AUR62013937 Chenopodium quinoa
AUR62019675 Chenopodium quinoa
AUR62019676 Chenopodium quinoa
BcaB01g00957 Brassica carinata
BcaB04g19719 Brassica carinata
BcaB05g23518 Brassica carinata
BcaB05g23585 Brassica carinata
BcaB05g23586 Brassica carinata
BcaB06g26617 Brassica carinata
BcaB07g34045 Brassica carinata
BcaB08g35084 Brassica carinata
BcaC01g00338 Brassica carinata
BcaC02g08004 Brassica carinata
BcaC02g08580 Brassica carinata
BcaC02g08582 Brassica carinata
BcaC03g14253 Brassica carinata
BcaC03g14396 Brassica carinata
BcaC05g25661 Brassica carinata
BcaC07g37735 Brassica carinata
BcaC07g41321 Brassica carinata
BcaC07g41403 Brassica carinata
BcaC08g43888 Brassica carinata
BcaC09g49138 Brassica carinata
BolC2t07734H Brassica oleracea
BolC2t07937H Brassica oleracea
BolC2t07938H Brassica oleracea
BolC4t26808H Brassica oleracea
BolC4t27459H Brassica oleracea
BolC5t30265H Brassica oleracea
BolC6t36430H Brassica oleracea
BolC8t47744H Brassica oleracea
BolC8t47746H Brassica oleracea
BolC8t52242H Brassica oleracea
BraA01t01463Z Brassica rapa
BraA01t02562Z Brassica rapa
BraA06t24467Z Brassica rapa
BraA09t41425Z Brassica rapa
BraA09t41426Z Brassica rapa
C01p42230 Brassica napus
C02p16330 Brassica napus
C02p16530 Brassica napus
C02p18050 Brassica napus
C02p56010 Brassica napus
C03p54870 Brassica napus
C03p78600 Brassica napus
C04p41100 Brassica napus
C04p52320 Brassica napus
C04p52330 Brassica napus
C04p59530 Brassica napus
C05p15580 Brassica napus
C05p52660 Brassica napus
C06p12730 Brassica napus
C07p27840 Brassica napus
C07p60450 Brassica napus
C08p08990 Brassica napus
C08p09000 Brassica napus
CAN.G375.59 Capsicum annuum
CANSAT56G3227 Cannabis sativa
CARHR017740 Cardamine hirsuta
Carub.0001s1691 Capsella rubella
Ca_03453_v3 Cicer arietinum L.
Ca_28877_v3 Cicer arietinum L.
Ca_28944_v3 Cicer arietinum L.
CBR_g61469 Chara braunii
Cc05_g10570 Coffea canephora
CDE02G3780 Ceratophyllum demersum
Cfa019500 Carpinus fangiana
Cfa023965 Carpinus fangiana
Ciclev10020632m.g Citrus clementina
CiPaw.11G154600 Carya illinoinensis
ClCG07G010350 Citrullus lanatus
COL.COLO4_05459 Corchorus olitorius
COL.COLO4_17394 Corchorus olitorius
Cpa.g.sc77.106 Carica papaya
Cre10.g424500 Chlamydomonas reinhardtii
Cre12.g531150 Chlamydomonas reinhardtii
CsaV3_4G007980 Cucumis sativus L.
CSS0041975 Camellia sinensis var. sinensis
DCAR_021047 Daucus carota
Dinv13351 Davidia involucrata
Dinv26695 Davidia involucrata
Duzib213G0800 Durio zibethinus
ECA236G3331 Erigeron canadensis
Eucgr.F03224 Eucalyptus grandis
FAN11G2746 Fragaria x ananassa
FAN16G1735 Fragaria x ananassa
FAN21G0932 Fragaria x ananassa
FvH4_3g17420 Fragaria vesca
Glyma.13G263300 Glycine max
Glyma.13G263400 Glycine max
Glyma.15G240751 Glycine max
Glyma.15G240800 Glycine max
Gohir.A08G234000 Gossypium hirsutum
Gohir.D08G254200 Gossypium hirsutum
Gorai.004G271100 Gossypium raimondii
GSVIVG01014076001 Vitis vinifera
HanXRQChr11g0330431 Helianthus annuus
HanXRQChr11g0330441 Helianthus annuus
HanXRQChr15g0495341 Helianthus annuus
Haze_08456 Corylus avellana
Haze_08457 Corylus avellana
Hma1.2p1_0713F.1_g207830 Hydrangea macrophylla
HPP92_024629 Vanilla planifolia
Hund10394 Selenicereus undatus
Lalb_Chr25g0285581 Lupinus albus
Lj3g0000931 Lotus japonicus
Lj8A144T67 Lonicera japonica
Lsat_1_v5_gn_7_100340 Lactuca sativa
Manes.15G101700 Manihot esculenta
Mapoly0014s0091 Marchantia polymorpha
MCO13G515 Micromonas commoda
MCO15G239 Micromonas commoda
MCO15G627 Micromonas commoda
MD11G1273100 Malus domestica
Medtr2g072830 Medicago truncatula
MELO3C016138.2 Cucumis melo
Migut.G00787 Erythranthe guttata
MSTRG.6697 Avicennia marina
Nitab4.5_0001140g0050 Nicotiana tabacum
Nitab4.5_0003618g0070 Nicotiana tabacum
Nn3g20902 Nelumbo nucifera
Oeu010039.1 Olea europaea
Oeu058446.1 Olea europaea
Os01g0665400 Oryza sativa ssp. japonica
Peaxi162Scf00111g01221 Petunia axillaris
PGR031G2804 Punica granatum
PGSC0003DMG400007057 Solanum tuberosum
Phvul.005G070000 Phaseolus vulgaris
Phvul.005G070200 Phaseolus vulgaris
Potri.011G114100 Populus trichocarpa
Pp3c6_13210 Physcomitrium patens
Pp3s34_123 Physcomitrium patens
Pp3s42_20 Physcomitrium patens
PRCOL_00001162 Prasinoderma coloniale
PRCOL_00001203 Prasinoderma coloniale
Prupe.4G154400 Prunus persica
Psat1g007800 Pisum sativum
PSO541G1993 Papaver somniferum
PSO675G0773 Papaver somniferum
QL08p024489 Quercus lobata
RcHm_v2.0_Chr5g0028931 Rosa chinensis
RcHm_v2.0_Chr5g0028951 Rosa chinensis
Rhsim06G0212800 Rhododendron simsii
Rhsim06G0213200 Rhododendron simsii
Sabra11G0100300 Salix brachista
SalBow8G3953 Salvia bowleyana
Sc03g0010770 Simmondsia chinensis
Sed0005020 Sechium edule
Sed0015060 Sechium edule
SEGI_15011 Sequoiadendron giganteum
SEGI_17539 Sequoiadendron giganteum
SEGI_24352 Sequoiadendron giganteum
SGA_v2.0_scaffold73G24377 Striga asiatica
SHI19235 Sapria himalayana
SMO119G0495 Selaginella moellendorffii
SMO163G0088 Selaginella moellendorffii
Solyc07g062070.3 Solanum lycopersicum
Sopen07g030330 Solanum pennellii
Sp1g15310 Schrenkiella parvula
TAR627G0069 Trochodendron aralioides
TAR629G0142 Trochodendron aralioides
THA.LOC104812287 Tarenaya hassleriana
THA.LOC104813974 Tarenaya hassleriana
Thecc.07G148500 Theobroma cacao
Thhalv10007918m.g Eutrema salsugineum
TPR.G27299 Trifolium pratense
TWI38G2125 Tripterygium wilfordii
unitig_37.g12553 Utricularia gibba
vmacro11984 Vaccinium macrocarpon
VMungo1080G0318 Vigna mungo
VMungo1080G1435 Vigna mungo
Zm00001eb157500 Zea mays
Zm00001eb359730 Zea mays

User provided reference genes

Program Settings