Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p48540 Brassica napus
Aa31LG10G10560 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3221 Anthoceros agrestis
Actinidia08535 Actinidia chinensis
Actinidia12908 Actinidia chinensis
Actinidia13885 Actinidia chinensis
Actinidia13886 Actinidia chinensis
Actinidia26727 Actinidia chinensis
Actinidia36892 Actinidia chinensis
Actinidia36893 Actinidia chinensis
Ah.15g098530 Amaranthus hybridus
Ah.16g102480 Amaranthus hybridus
AL5G36700 Arabidopsis lyrata
Aqoxy1G00897 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1A4P42 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.2U9KWS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.80FYU6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.95BPNM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J5AQBN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JYY6TN Arachis hypogaea
AT3G55530 Arabidopsis thaliana
ATR0559G280 Amborella trichopoda
Atru.chr12.416 Acer truncatum
Atru.chr3.3967 Acer truncatum
AUR62001751 Chenopodium quinoa
AUR62012119 Chenopodium quinoa
AUR62040717 Chenopodium quinoa
BcaB01g00085 Brassica carinata
BcaC07g39879 Brassica carinata
BolC8t50710H Brassica oleracea
C08p30840 Brassica napus
CANSAT54G2540 Cannabis sativa
CANSAT56G1342 Cannabis sativa
CARHR165590 Cardamine hirsuta
Carub.0005s2226 Capsella rubella
Ca_08172_v3 Cicer arietinum L.
Ca_20624_v3 Cicer arietinum L.
Cc02_g07580 Coffea canephora
CDE02G1059 Ceratophyllum demersum
CDE08G0984 Ceratophyllum demersum
Cfa001450 Carpinus fangiana
Cfa011530 Carpinus fangiana
Ciclev10030412m.g Citrus clementina
Ciclev10032379m.g Citrus clementina
CiPaw.01G289700 Carya illinoinensis
CiPaw.13G090700 Carya illinoinensis
ClCG11G006780 Citrullus lanatus
COL.COLO4_15089 Corchorus olitorius
COL.COLO4_18562 Corchorus olitorius
Cpa.g.sc1.429 Carica papaya
Cpa.g.sc81.110 Carica papaya
Cre12.g501450 Chlamydomonas reinhardtii
CsaV3_6G001260 Cucumis sativus L.
CSS0002488 Camellia sinensis var. sinensis
CSS0004294 Camellia sinensis var. sinensis
CSS0032889 Camellia sinensis var. sinensis
DCAR_018921 Daucus carota
Dinv06767 Davidia involucrata
Dinv34268 Davidia involucrata
Duzib106G1967 Durio zibethinus
Duzib114G0911 Durio zibethinus
Duzib150G0631 Durio zibethinus
Duzib150G1491 Durio zibethinus
Duzib168G0263 Durio zibethinus
Duzib170G0696 Durio zibethinus
ECA232G4890 Erigeron canadensis
EL10Ac2g04722 Beta vulgaris
EL10Ac3g05308 Beta vulgaris
EL10Ac7g16053 Beta vulgaris
Eucgr.G02946 Eucalyptus grandis
Eucgr.J02038 Eucalyptus grandis
FAN03G2315 Fragaria x ananassa
FAN06G0546 Fragaria x ananassa
FAN06G3709 Fragaria x ananassa
FAN10G3533 Fragaria x ananassa
FvH4_7g22830 Fragaria vesca
Glyma.11G137400 Glycine max
Glyma.11G220200 Glycine max
Glyma.12G060800 Glycine max
Glyma.18G037200 Glycine max
Gohir.A03G044500 Gossypium hirsutum
Gohir.A10G221000 Gossypium hirsutum
Gohir.A13G227000 Gossypium hirsutum
Gohir.D03G122700 Gossypium hirsutum
Gohir.D10G233200 Gossypium hirsutum
Gohir.D13G232300 Gossypium hirsutum
Gorai.003G129400 Gossypium raimondii
Gorai.011G266800 Gossypium raimondii
Gorai.013G263100 Gossypium raimondii
GSVIVG01016511001 Vitis vinifera
GSVIVG01024921001 Vitis vinifera
HanXRQChr10g0312851 Helianthus annuus
Haze_17091 Corylus avellana
Haze_24135 Corylus avellana
Hma1.2p1_0757F.1_g213320 Hydrangea macrophylla
Hma1.2p1_1480F.1_g286053 Hydrangea macrophylla
HPP92_006644 Vanilla planifolia
Hund04929 Selenicereus undatus
Hund16071 Selenicereus undatus
Lalb_Chr15g0084651 Lupinus albus
Lalb_Chr24g0394051 Lupinus albus
Lj1A148T52 Lonicera japonica
Lj1C940T8 Lonicera japonica
Lj3g0017508 Lotus japonicus
Lj6g0009635 Lotus japonicus
Lj8A82T51 Lonicera japonica
Lsat_1_v5_gn_2_118280 Lactuca sativa
Manes.01G170400 Manihot esculenta
Manes.07G118000 Manihot esculenta
Mapoly0020s0054 Marchantia polymorpha
MBI05_g29687_MAGBIO Magnolia biondii
MD01G1136500 Malus domestica
MD07G1201500 Malus domestica
MD11G1096300 Malus domestica
Medtr3g067985 Medicago truncatula
Medtr3g067995 Medicago truncatula
Medtr4g064550 Medicago truncatula
Medtr4g064560 Medicago truncatula
MELO3C008223.2 Cucumis melo
Migut.F01531 Erythranthe guttata
MSTRG.276 Avicennia marina
MSTRG.8261 Avicennia marina
Nitab4.5_0000272g0040 Nicotiana tabacum
Nitab4.5_0000647g0150 Nicotiana tabacum
Nitab4.5_0006365g0020 Nicotiana tabacum
Nitab4.5_0008249g0030 Nicotiana tabacum
Nn2g11170 Nelumbo nucifera
Oeu017652.1 Olea europaea
Os03g0272300 Oryza sativa ssp. japonica
Peaxi162Scf00122g00048 Petunia axillaris
Peaxi162Scf00122g00049 Petunia axillaris
Peaxi162Scf00164g01220 Petunia axillaris
PGR119G0781 Punica granatum
PGR142G2124 Punica granatum
PGSC0003DMG400002152 Solanum tuberosum
Phvul.001G233500 Phaseolus vulgaris
Phvul.011G062500 Phaseolus vulgaris
Potri.009G034700 Populus trichocarpa
Potri.010G201500 Populus trichocarpa
Pp3c15_2690 Physcomitrium patens
Pp3c9_2330 Physcomitrium patens
Prupe.2G238100 Prunus persica
Prupe.6G071900 Prunus persica
Prupe.8G106000 Prunus persica
Psat0s5242g0040 Pisum sativum
Psat0ss2553g0040 Pisum sativum
Psat5g123600 Pisum sativum
Psat7g210640 Pisum sativum
PSO017G2755 Papaver somniferum
PSO063G3772 Papaver somniferum
PSO339G1503 Papaver somniferum
PSO339G1680 Papaver somniferum
PSO339G2861 Papaver somniferum
PSO513G0026 Papaver somniferum
PSO675G7116 Papaver somniferum
QL01p030710 Quercus lobata
QL05p040174 Quercus lobata
QL08p060246 Quercus lobata
QL08p060482 Quercus lobata
RcHm_v2.0_Chr1g0367981 Rosa chinensis
Rhsim09G0167200 Rhododendron simsii
Sabra10G0155500 Salix brachista
Sc10g0001720 Simmondsia chinensis
Sc21g0005970 Simmondsia chinensis
Sed0003735 Sechium edule
Sed0018949 Sechium edule
SGA_v2.0_scaffold221G42690 Striga asiatica
SGA_v2.0_scaffold2G01024 Striga asiatica
SGA_v2.0_scaffold7G04096 Striga asiatica
SHI22634 Sapria himalayana
SMO367G0986 Selaginella moellendorffii
Solyc05g053040.3 Solanum lycopersicum
Solyc06g005630.3 Solanum lycopersicum
Sopen05g031560 Solanum pennellii
Sopen06g001600 Solanum pennellii
Sp5g06950 Schrenkiella parvula
TAR623G1685 Trochodendron aralioides
THA.LOC104810038 Tarenaya hassleriana
Thecc.09G317500 Theobroma cacao
Thecc.10G037000 Theobroma cacao
Thhalv10010626m.g Eutrema salsugineum
TPR.G15819 Trifolium pratense
TPR.G23586 Trifolium pratense
TWI15G1030 Tripterygium wilfordii
TWI31G1295 Tripterygium wilfordii
unitig_0.g1019 Utricularia gibba
vmacro03041 Vaccinium macrocarpon
vmacro10222 Vaccinium macrocarpon
VMungo1127G1202 Vigna mungo
VMungo1127G1384 Vigna mungo
VMungo1383G2117 Vigna mungo
Zm00001eb012200 Zea mays
Zm00001eb397760 Zea mays

User provided reference genes

Program Settings