Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p09560 Brassica napus
Aa31csc798G10 Aethionema arabicum
Actinidia34878 Actinidia chinensis
Aqoxy12s041 Aquilegia oxysepala
Aqoxy38s018 Aquilegia oxysepala
Aqoxy4G01626 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8GMV2Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N584HR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PT41Y0 Arachis hypogaea
AT2G07734 Arabidopsis thaliana
ATMG00270 Arabidopsis thaliana
ATMG00290 Arabidopsis thaliana
ATR0794G104 Amborella trichopoda
BNapus_Darmor_BZH_scaffold_234p00290 Brassica napus
BNapus_Darmor_BZH_scaffold_234p00340 Brassica napus
BolSC28t60322H Brassica oleracea
BolSC28t60338H Brassica oleracea
BolSC28t60397H Brassica oleracea
BolSC28t60424H Brassica oleracea
BraSC159t45725Z Brassica rapa
BraSC159t45733Z Brassica rapa
BraSC48t46288Z Brassica rapa
BraSC48t46302Z Brassica rapa
BraSC48t46337Z Brassica rapa
BraSC77t46643Z Brassica rapa
CAN.G1.11 Capsicum annuum
CAN.G110.13 Capsicum annuum
CAN.G1109.3 Capsicum annuum
CAN.G564.28 Capsicum annuum
CAN.G85.23 Capsicum annuum
CAN.G950.3 Capsicum annuum
CANSAT16G0040 Cannabis sativa
CARHR282730 Cardamine hirsuta
CARHR287140 Cardamine hirsuta
Ca_14831_v3 Cicer arietinum L.
Ca_19144_v3 Cicer arietinum L.
Ca_26945_v3 Cicer arietinum L.
Ca_30659_v3 Cicer arietinum L.
CDE02G0177 Ceratophyllum demersum
CDE02G3221 Ceratophyllum demersum
CiPaw.05G081600 Carya illinoinensis
CsaV3_UNG208660 Cucumis sativus L.
CsaV3_UNG208670 Cucumis sativus L.
CSS0025973 Camellia sinensis var. sinensis
DCAR_032455 Daucus carota
DCAR_032460 Daucus carota
Dinv18903 Davidia involucrata
EL10Ac7g18051 Beta vulgaris
Eucgr.C02512 Eucalyptus grandis
Eucgr.H02717 Eucalyptus grandis
Glyma.08G301000 Glycine max
Gohir.A03G108600 Gossypium hirsutum
Gohir.A08G086024 Gossypium hirsutum
Gohir.A13G071500 Gossypium hirsutum
Gorai.001G161800 Gossypium raimondii
Gorai.001G168000 Gossypium raimondii
GSVIVG01006669001 Vitis vinifera
HanXRQChr00c0234g0572741 Helianthus annuus
HanXRQChr01g0013411 Helianthus annuus
HanXRQChr02g0049481 Helianthus annuus
HanXRQChr05g0138811 Helianthus annuus
HanXRQChr05g0138821 Helianthus annuus
HanXRQChr05g0138831 Helianthus annuus
HanXRQChr05g0138841 Helianthus annuus
HanXRQChr05g0138851 Helianthus annuus
HanXRQChr09g0237761 Helianthus annuus
HanXRQChr10g0302361 Helianthus annuus
HanXRQChr10g0310901 Helianthus annuus
HanXRQChr16g0504301 Helianthus annuus
HanXRQMTg0579381 Helianthus annuus
HanXRQMTg0579471 Helianthus annuus
Hma1.2p1_0020F.1_g014210 Hydrangea macrophylla
Hma1.2p1_0020F.1_g014220 Hydrangea macrophylla
Lalb_Chr00c21g0406031 Lupinus albus
Lalb_Chr00c24g0406771 Lupinus albus
Lalb_Chr00c39g0409031 Lupinus albus
Lalb_Chr00c39g0409211 Lupinus albus
Lalb_Chr00c51g0413121 Lupinus albus
Lalb_Chr22g0353791 Lupinus albus
Lalb_Chr22g0353801 Lupinus albus
Lj2P1233T102 Lonicera japonica
Lj2P1236T75 Lonicera japonica
Lj2P1236T76 Lonicera japonica
Lj2P92T86 Lonicera japonica
Lj5g0015285 Lotus japonicus
Lj5g0026865 Lotus japonicus
LjContig00315g0004708 Lotus japonicus
LjContig00439g0001390 Lotus japonicus
LjContig00439g0008559 Lotus japonicus
LjContig00446g0016600 Lotus japonicus
Lsat_1_v5_gn_7_67721 Lactuca sativa
MBI05_g05356_MAGBIO Magnolia biondii
MBI05_g23322_MAGBIO Magnolia biondii
Medtr0030s0090 Medicago truncatula
Medtr0082s0030 Medicago truncatula
Medtr4g132165 Medicago truncatula
Medtr5g020310 Medicago truncatula
Nitab4.5_0000172g0300 Nicotiana tabacum
Nitab4.5_0000172g0410 Nicotiana tabacum
Nitab4.5_0000172g1090 Nicotiana tabacum
Nitab4.5_0000172g1110 Nicotiana tabacum
Nitab4.5_0000172g2130 Nicotiana tabacum
Nitab4.5_0000172g2150 Nicotiana tabacum
Nitab4.5_0000172g2160 Nicotiana tabacum
Nitab4.5_0000351g0300 Nicotiana tabacum
Nitab4.5_0001127g0280 Nicotiana tabacum
Nitab4.5_0001152g0030 Nicotiana tabacum
Nitab4.5_0001152g0040 Nicotiana tabacum
Nitab4.5_0001152g0050 Nicotiana tabacum
Nitab4.5_0001152g0290 Nicotiana tabacum
Nitab4.5_0001152g0480 Nicotiana tabacum
Nitab4.5_0001152g0550 Nicotiana tabacum
Nitab4.5_0001152g0960 Nicotiana tabacum
Nitab4.5_0001152g0970 Nicotiana tabacum
Nitab4.5_0001152g1080 Nicotiana tabacum
Nitab4.5_0003784g0040 Nicotiana tabacum
Nitab4.5_0003945g0030 Nicotiana tabacum
Nitab4.5_0003945g0070 Nicotiana tabacum
Nitab4.5_0003945g0090 Nicotiana tabacum
Nitab4.5_0005057g0050 Nicotiana tabacum
Nitab4.5_0006196g0040 Nicotiana tabacum
Nitab4.5_0008059g0040 Nicotiana tabacum
Nitab4.5_0010321g0030 Nicotiana tabacum
Nitab4.5_0010559g0050 Nicotiana tabacum
Nn003s41395 Nelumbo nucifera
Nn1g09918 Nelumbo nucifera
Nn1g09965 Nelumbo nucifera
Nn1g10026 Nelumbo nucifera
Nn1g10028 Nelumbo nucifera
Nn1g10124 Nelumbo nucifera
Oeu013683.1 Olea europaea
Peaxi162Scf00456g00029 Petunia axillaris
Peaxi162Scf00456g00032 Petunia axillaris
PGSC0003DMG400033608 Solanum tuberosum
Pp3c12_12240 Physcomitrium patens
Psat0s1454g0040 Pisum sativum
Psat1g142840 Pisum sativum
Psat4g178200 Pisum sativum
Psat4g185600 Pisum sativum
Psat6g041320 Pisum sativum
PSO063G7170 Papaver somniferum
PSO339G1469 Papaver somniferum
PSO513G0171 Papaver somniferum
PSO585G0042 Papaver somniferum
RcHm_v2.0_MTg0498991 Rosa chinensis
RcHm_v2.0_MTg0499001 Rosa chinensis
RhsimMtG0007100 Rhododendron simsii
SabraMtG0003300 Salix brachista
Sed0011263 Sechium edule
Sed0015872 Sechium edule
SEGI_36410 Sequoiadendron giganteum
SGA_v2.0_scaffold339G49283 Striga asiatica
SGA_v2.0_scaffold400G50848 Striga asiatica
SGA_v2.0_scaffold420G51390 Striga asiatica
SGA_v2.0_scaffold648G53338 Striga asiatica
SHI20127 Sapria himalayana
SHI20129 Sapria himalayana
SHI20130 Sapria himalayana
SHI20131 Sapria himalayana
SHI35305 Sapria himalayana
SHI35306 Sapria himalayana
SHI49089 Sapria himalayana
SHI53309 Sapria himalayana
Solyc00g021630.1 Solanum lycopersicum
Solyc00g021640.2 Solanum lycopersicum
Solyc10g045730.1 Solanum lycopersicum
Solyc10g045740.2 Solanum lycopersicum
Solyc11g030930.3 Solanum lycopersicum
Solyc11g030935.1 Solanum lycopersicum
Solyc11g030940.3 Solanum lycopersicum
Sp3g25550 Schrenkiella parvula
Sp3g25610 Schrenkiella parvula
Sp5g20260 Schrenkiella parvula
Thhalv10023100m.g Eutrema salsugineum
Thhalv10029192m.g Eutrema salsugineum
TPR.G20538 Trifolium pratense
TPR.G31549 Trifolium pratense
TPR.G36112 Trifolium pratense
TPR.G36113 Trifolium pratense
TPR.G39738 Trifolium pratense
TPR.G40594 Trifolium pratense
unitig_0.g2040 Utricularia gibba
unitig_87.g28026 Utricularia gibba
VMungo0985G0003 Vigna mungo
VMungo0985G0017 Vigna mungo
Zm00001eb384400 Zea mays
Zm00001eb436030 Zea mays
Zm00001eb438100 Zea mays
Zm00001eb438110 Zea mays
Zm00001eb438970 Zea mays
Zm00001eb438980 Zea mays
Zm00001eb439050 Zea mays
Zm00001eb439060 Zea mays
Zm00001eb440630 Zea mays

User provided reference genes

Program Settings