Gene: ATMG00290
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier ATMG00290
- Transcript Identifier ATMG00290.1
- Gene Type Coding gene
- Location ChrM : 82028-83116 : negative
Gene Family Information
- ID HOM05D003517
- #Genes/#Species 194/55
- Phylogenetic origin
- ID ORTHO05D009798
- #Genes/#Species 91/41
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid ATMG00290.1
- symbol RPS4
- uniprot Q31708
Descriptions
- Description mitochondrial ribosomal protein S4
- Computational description mitochondrial ribosomal protein S4 (RPS4); FUNCTIONS IN: structural constituent of ribosome, protein binding; INVOLVED IN: translation; LOCATED IN: mitochondrion, mitochondrial small ribosomal subunit; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: RNA-binding S4 (InterPro:IPR002942); BEST Arabidopsis thaliana protein match is: Alpha-L RNA-binding motif/Ribosomal protein S4 family protein (TAIR:AT2G07734.1).
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Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | TAS | Gene Ontology | translation | |
| GO:0045903 | IBA | GOA Database | positive regulation of translational fidelity |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IPI | Gene Ontology | protein binding | 1 |
| GO:0003735 | IBA | GOA Database | structural constituent of ribosome | |
| GO:0003735 | NAS | Gene Ontology | structural constituent of ribosome | 2 |
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0019843 | IBA IEA | GOA Database | rRNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005763 | TAS | Gene Ontology | mitochondrial small ribosomal subunit | |
| GO:0005739 | IEA | GOA Database | mitochondrion | |
| GO:0005840 | IEA | GOA Database | ribosome | |
| GO:0015935 | IBA | GOA Database | small ribosomal subunit |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 17.7.1.2.3 | Protein biosynthesis.organelle machinery.mitochondrial ribosome.small ribosomal subunit proteome.component mtRPS4 |