Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p21260 Brassica napus
Aa31LG2G12370 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1501 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.608 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.609 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.764 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.1411 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2211 Anthoceros agrestis
Actinidia04335 Actinidia chinensis
Ah.15g092010 Amaranthus hybridus
AL727U10010 Arabidopsis lyrata
AL7G38710 Arabidopsis lyrata
Aqoxy3G00583 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.G058EZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S8BAEK Arachis hypogaea
AT4G16340 Arabidopsis thaliana
ATR0068G076 Amborella trichopoda
Atru.chr8.1046 Acer truncatum
AUR62022352 Chenopodium quinoa
AUR62034357 Chenopodium quinoa
BcaC09g50329 Brassica carinata
BcaNung00207 Brassica carinata
BolC1t02600H Brassica oleracea
BraA01t02033Z Brassica rapa
C01p26570 Brassica napus
CAN.G151.23 Capsicum annuum
CAN.G338.64 Capsicum annuum
CAN.G578.10 Capsicum annuum
CAN.G68.16 Capsicum annuum
CAN.G729.11 Capsicum annuum
CAN.G83.10 Capsicum annuum
CAN.G83.9 Capsicum annuum
CAN.G861.1 Capsicum annuum
CANSAT80G1492 Cannabis sativa
CANSAT80G2607 Cannabis sativa
CARHR222710 Cardamine hirsuta
Carub.0007s2520 Capsella rubella
Ca_24183_v3 Cicer arietinum L.
Ca_24184_v3 Cicer arietinum L.
Ca_24185_v3 Cicer arietinum L.
Ca_24186_v3 Cicer arietinum L.
CBR_g22314 Chara braunii
CBR_g22316 Chara braunii
Cc03_g11030 Coffea canephora
Cc03_g16320 Coffea canephora
CDE08G0995 Ceratophyllum demersum
CDE09G0213 Ceratophyllum demersum
CDE09G0759 Ceratophyllum demersum
Cfa019400 Carpinus fangiana
Ciclev10010893m.g Citrus clementina
CiPaw.11G060700 Carya illinoinensis
ClCG03G013860 Citrullus lanatus
ClCG09G022710 Citrullus lanatus
COL.COLO4_11259 Corchorus olitorius
Cpa.g.sc3151.1 Carica papaya
Cpa.g.sc34.42 Carica papaya
Cpa.g.sc34.43 Carica papaya
Cpa.g.sc34.44 Carica papaya
CsaV3_7G022910 Cucumis sativus L.
CSS0012196 Camellia sinensis var. sinensis
CSS0025770 Camellia sinensis var. sinensis
CSS0042974 Camellia sinensis var. sinensis
DCAR_001249 Daucus carota
Dinv25490 Davidia involucrata
Dinv42441 Davidia involucrata
Duzib251G0447 Durio zibethinus
ECA246G2710 Erigeron canadensis
EL10Ac7g17310 Beta vulgaris
Eucgr.K02348 Eucalyptus grandis
FAN11G1602 Fragaria x ananassa
FAN16G2874 Fragaria x ananassa
FAN21G0765 Fragaria x ananassa
FAN25G3182 Fragaria x ananassa
FvH4_3g14770 Fragaria vesca
Glyma.08G148300 Glycine max
Glyma.15G212800 Glycine max
Gohir.A12G174150 Gossypium hirsutum
Gohir.A12G174201 Gossypium hirsutum
Gohir.A12G174251 Gossypium hirsutum
Gohir.D12G176866 Gossypium hirsutum
Gohir.D12G176932 Gossypium hirsutum
Gorai.008G189300 Gossypium raimondii
GSVIVG01014992001 Vitis vinifera
HanXRQChr06g0171691 Helianthus annuus
HanXRQChr17g0541121 Helianthus annuus
Haze_07798 Corylus avellana
HPP92_006681 Vanilla planifolia
Hund01269 Selenicereus undatus
Lalb_Chr01g0007231 Lupinus albus
Lalb_Chr19g0133201 Lupinus albus
Lj3C843G5 Lonicera japonica
Lj3g0024547 Lotus japonicus
Lj6A705G41 Lonicera japonica
Lj6C705G6 Lonicera japonica
Lsat_1_v5_gn_3_34601 Lactuca sativa
Lsat_1_v5_gn_3_41440 Lactuca sativa
Lsat_1_v5_gn_5_53440 Lactuca sativa
Lsat_1_v5_gn_7_41641 Lactuca sativa
Manes.17G018400 Manihot esculenta
Mapoly0021s0072 Marchantia polymorpha
MBI19_g24061_MAGBIO Magnolia biondii
MCO09G216 Micromonas commoda
MD05G1229900 Malus domestica
MD05G1233200 Malus domestica
MD10G1209700 Malus domestica
Medtr8g056900 Medicago truncatula
MELO3C012607.2 Cucumis melo
Migut.H02557 Erythranthe guttata
MSTRG.21739 Avicennia marina
Nitab4.5_0000348g0150 Nicotiana tabacum
Nitab4.5_0000348g0160 Nicotiana tabacum
Nitab4.5_0001070g0090 Nicotiana tabacum
Nitab4.5_0001070g0110 Nicotiana tabacum
Nn1g07188 Nelumbo nucifera
Nn1g07198 Nelumbo nucifera
Oeu038381.1 Olea europaea
Os03g0328000 Oryza sativa ssp. japonica
Peaxi162Scf00280g00008 Petunia axillaris
Peaxi162Scf01205g00167 Petunia axillaris
Peaxi162Scf01205g00192 Petunia axillaris
PGR044G0024 Punica granatum
Phvul.009G114325 Phaseolus vulgaris
Phvul.011G172400 Phaseolus vulgaris
Phvul.011G177325 Phaseolus vulgaris
Phvul.011G177600 Phaseolus vulgaris
Potri.004G000750 Populus trichocarpa
Potri.011G024000 Populus trichocarpa
Pp3c10_16640 Physcomitrium patens
Pp3c15_8680 Physcomitrium patens
Pp3c1_25190 Physcomitrium patens
Pp3c3_15370 Physcomitrium patens
Pp3c4_25310 Physcomitrium patens
Pp3c9_15160 Physcomitrium patens
Prupe.3G108400 Prunus persica
Prupe.4G132800 Prunus persica
Psat0s1032g0040 Pisum sativum
Psat4g137560 Pisum sativum
PSO541G5947 Papaver somniferum
PSO675G8441 Papaver somniferum
QL04p084696 Quercus lobata
QL04p084884 Quercus lobata
QL04p085078 Quercus lobata
QL04p085812 Quercus lobata
QL04p085886 Quercus lobata
RcHm_v2.0_Chr5g0024291 Rosa chinensis
RcHm_v2.0_Chr5g0024301 Rosa chinensis
RcHm_v2.0_Chr5g0024371 Rosa chinensis
RcHm_v2.0_Chr5g0024381 Rosa chinensis
Rhsim09G0069300 Rhododendron simsii
Sabra11G0015000 Salix brachista
SalBow1G2205 Salvia bowleyana
Sc15g0007400 Simmondsia chinensis
Sc15g0007430 Simmondsia chinensis
Sed0010866 Sechium edule
SEGI_22890 Sequoiadendron giganteum
SEGI_26038 Sequoiadendron giganteum
SEGI_32993 Sequoiadendron giganteum
SEGI_34400 Sequoiadendron giganteum
SGA_v2.0_scaffold161G37832 Striga asiatica
SHI02260 Sapria himalayana
SHI02261 Sapria himalayana
SHI02262 Sapria himalayana
SHI02263 Sapria himalayana
SMO011G0025 Selaginella moellendorffii
Solyc08g016060.1 Solanum lycopersicum
Solyc08g016070.3 Solanum lycopersicum
Sopen08g006320 Solanum pennellii
Sp7g14850 Schrenkiella parvula
TAR376G1097 Trochodendron aralioides
TAR623G0212 Trochodendron aralioides
THA.LOC104823022 Tarenaya hassleriana
Thecc.02G366300 Theobroma cacao
Thhalv10024194m.g Eutrema salsugineum
TPR.G35990 Trifolium pratense
TPR.G38062 Trifolium pratense
TPR.G9397 Trifolium pratense
TWI60G1460 Tripterygium wilfordii
unitig_0.g2295 Utricularia gibba
unitig_0.g393 Utricularia gibba
unitig_60.g25589 Utricularia gibba
vmacro15989 Vaccinium macrocarpon
vmacro15990 Vaccinium macrocarpon
vmacro15991 Vaccinium macrocarpon
vmacro15992 Vaccinium macrocarpon
VMungo1127G1360 Vigna mungo
Zm00001eb015660 Zea mays
Zm00001eb110210 Zea mays
Zm00001eb113250 Zea mays
Zm00001eb145990 Zea mays
Zm00001eb265700 Zea mays
Zm00001eb265730 Zea mays
Zm00001eb391790 Zea mays
Zm00001eb395310 Zea mays
Zm00001eb412430 Zea mays

User provided reference genes

Program Settings