Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p02330 Brassica napus
Aa31LG11G6620 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5492 Anthoceros agrestis
Actinidia00955 Actinidia chinensis
Actinidia02211 Actinidia chinensis
Actinidia02220 Actinidia chinensis
Actinidia03517 Actinidia chinensis
Actinidia03519 Actinidia chinensis
Actinidia13944 Actinidia chinensis
Actinidia13945 Actinidia chinensis
Actinidia35642 Actinidia chinensis
Ah.16g103640 Amaranthus hybridus
AL6G15450 Arabidopsis lyrata
Aqoxy4G02502 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.J7W2E5 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V2YUX7 Arachis hypogaea
AT5G05560 Arabidopsis thaliana
ATR0681G383 Amborella trichopoda
Atru.chr12.67 Acer truncatum
AUR62012268 Chenopodium quinoa
AUR62022903 Chenopodium quinoa
BcaB01g05759 Brassica carinata
BcaB01g05925 Brassica carinata
BcaB01g05927 Brassica carinata
BcaB01g05953 Brassica carinata
BcaB05g21711 Brassica carinata
BolC2t06204H Brassica oleracea
BolC3t12820H Brassica oleracea
BraA02t04853Z Brassica rapa
BraA03t09597Z Brassica rapa
C02p02390 Brassica napus
C03p02660 Brassica napus
CAN.G1193.2 Capsicum annuum
CAN.G1193.3 Capsicum annuum
CAN.G1782.1 Capsicum annuum
CAN.G3101.1 Capsicum annuum
CAN.G78.68 Capsicum annuum
CAN.G78.69 Capsicum annuum
CAN.G78.70 Capsicum annuum
CAN.G78.71 Capsicum annuum
CAN.G78.72 Capsicum annuum
CAN.G78.73 Capsicum annuum
CANSAT56G1673 Cannabis sativa
CARHR104430 Cardamine hirsuta
CARHR207700 Cardamine hirsuta
Carub.0006s0446 Capsella rubella
Ca_05974_v3 Cicer arietinum L.
Ca_30996_v3 Cicer arietinum L.
CBR_g22845 Chara braunii
Cc02_g06280 Coffea canephora
Cc02_g06290 Coffea canephora
Cc02_g06300 Coffea canephora
CDE12G0028 Ceratophyllum demersum
CDE12G0911 Ceratophyllum demersum
Cfa001305 Carpinus fangiana
Cfa022850 Carpinus fangiana
Ciclev10030498m.g Citrus clementina
CiPaw.01G300000 Carya illinoinensis
CiPaw.01G300100 Carya illinoinensis
ClCG07G004320 Citrullus lanatus
Cpa.g.sc19.161 Carica papaya
Cre13.g579100 Chlamydomonas reinhardtii
CsaV3_5G010260 Cucumis sativus L.
CSS0013780 Camellia sinensis var. sinensis
DCAR_011823 Daucus carota
DCAR_011824 Daucus carota
Dinv10611 Davidia involucrata
Duzib106G0351 Durio zibethinus
Duzib114G0096 Durio zibethinus
ECA238G3428 Erigeron canadensis
EL10Ac2g04850 Beta vulgaris
EL10Ac4g08160 Beta vulgaris
Eucgr.G03070 Eucalyptus grandis
FAN01G1605 Fragaria x ananassa
FAN03G1412 Fragaria x ananassa
FAN03G1608 Fragaria x ananassa
FAN06G4945 Fragaria x ananassa
FAN10G4174 Fragaria x ananassa
FvH4_7g24630 Fragaria vesca
Glyma.02G258100 Glycine max
Glyma.14G058400 Glycine max
Gohir.A10G240100 Gossypium hirsutum
Gohir.D10G252000 Gossypium hirsutum
Gorai.011G292500 Gossypium raimondii
Gorai.011G292700 Gossypium raimondii
GSVIVG01032797001 Vitis vinifera
GSVIVG01034772001 Vitis vinifera
GSVIVG01034775001 Vitis vinifera
HanXRQChr14g0459601 Helianthus annuus
HanXRQChr15g0464841 Helianthus annuus
Haze_17240 Corylus avellana
Hma1.2p1_0235F.1_g098570 Hydrangea macrophylla
HPP92_012027 Vanilla planifolia
HPP92_012036 Vanilla planifolia
HPP92_012037 Vanilla planifolia
HPP92_012038 Vanilla planifolia
HPP92_012039 Vanilla planifolia
Hund15919 Selenicereus undatus
Hund28567 Selenicereus undatus
Hund29345 Selenicereus undatus
Lalb_Chr04g0250511 Lupinus albus
Lj8A65G43 Lonicera japonica
Lj8A65T40 Lonicera japonica
Lj8A65T41 Lonicera japonica
Lj8C65G6 Lonicera japonica
Lj8C65T9 Lonicera japonica
LjContig00357g0011776 Lotus japonicus
Lsat_1_v5_gn_1_119241 Lactuca sativa
Lsat_1_v5_gn_1_82880 Lactuca sativa
Lsat_1_v5_gn_2_124500 Lactuca sativa
Lsat_1_v5_gn_2_57160 Lactuca sativa
Lsat_1_v5_gn_4_75100 Lactuca sativa
Lsat_1_v5_gn_7_99341 Lactuca sativa
Lsat_1_v5_gn_8_83220 Lactuca sativa
Manes.07G131200 Manihot esculenta
Mapoly0044s0071 Marchantia polymorpha
MBI08_g18763_MAGBIO Magnolia biondii
MBI08_g18764_MAGBIO Magnolia biondii
MBI12_g24829_MAGBIO Magnolia biondii
MBI15_g19421_MAGBIO Magnolia biondii
MCO04G065 Micromonas commoda
MD07G1223400 Malus domestica
Medtr5g082890 Medicago truncatula
MELO3C026794.2 Cucumis melo
Migut.F01404 Erythranthe guttata
MSTRG.8339 Avicennia marina
Nitab4.5_0000797g0050 Nicotiana tabacum
Nitab4.5_0011089g0010 Nicotiana tabacum
Nitab4.5_0011089g0020 Nicotiana tabacum
Nn2g10890 Nelumbo nucifera
Oeu049666.1 Olea europaea
Os05g0354300 Oryza sativa ssp. japonica
Peaxi162Scf00284g00912 Petunia axillaris
Peaxi162Scf00284g00913 Petunia axillaris
PGR142G1812 Punica granatum
Phvul.008G222900 Phaseolus vulgaris
Potri.008G070300 Populus trichocarpa
Potri.010G187201 Populus trichocarpa
Pp3c11_19460 Physcomitrium patens
Prupe.2G252000 Prunus persica
Psat1g148680 Pisum sativum
Psat2g032000 Pisum sativum
Psat2g065680 Pisum sativum
Psat2g110320 Pisum sativum
Psat3g009720 Pisum sativum
Psat4g081200 Pisum sativum
Psat7g005400 Pisum sativum
Psat7g097320 Pisum sativum
PSO339G2087 Papaver somniferum
PSO384G0172 Papaver somniferum
QL08p063313 Quercus lobata
RcHm_v2.0_Chr1g0370461 Rosa chinensis
RcHm_v2.0_Chr3g0496051 Rosa chinensis
Rhsim05G0134800 Rhododendron simsii
Rhsim09G0177900 Rhododendron simsii
Rhsim10G0095300 Rhododendron simsii
Rhsim10G0095400 Rhododendron simsii
Sabra08G0051700 Salix brachista
Sabra10G0144400 Salix brachista
SalBow5G5368 Salvia bowleyana
Sc11g0005130 Simmondsia chinensis
Sed0003450 Sechium edule
SEGI_00595 Sequoiadendron giganteum
SEGI_03313 Sequoiadendron giganteum
SEGI_23081 Sequoiadendron giganteum
SEGI_27844 Sequoiadendron giganteum
SGA_v2.0_scaffold365G49997 Striga asiatica
SHI03327 Sapria himalayana
SHI03328 Sapria himalayana
SHI03332 Sapria himalayana
SHI03333 Sapria himalayana
SHI03334 Sapria himalayana
SHI03335 Sapria himalayana
SHI03336 Sapria himalayana
SHI03337 Sapria himalayana
SHI03338 Sapria himalayana
SMO105G0008 Selaginella moellendorffii
SMO331G0080 Selaginella moellendorffii
Solyc06g048460.2 Solanum lycopersicum
Sopen06g014600 Solanum pennellii
Sp6g37310 Schrenkiella parvula
TAR623G0495 Trochodendron aralioides
TAR623G0911 Trochodendron aralioides
TAR627G0335 Trochodendron aralioides
THA.LOC104816541 Tarenaya hassleriana
Thecc.10G014500 Theobroma cacao
Thhalv10012420m.g Eutrema salsugineum
Thhalv10015101m.g Eutrema salsugineum
Thhalv10015394m.g Eutrema salsugineum
TPR.G38386 Trifolium pratense
TWI09G0940 Tripterygium wilfordii
unitig_60.g25675 Utricularia gibba
vmacro10035 Vaccinium macrocarpon
VMungo0647G1152 Vigna mungo
Zm00001eb286110 Zea mays

User provided reference genes

Program Settings