Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p15310 Brassica napus
A03p54940 Brassica napus
Aa31LG6G7240 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3367 Anthoceros agrestis
Actinidia22188 Actinidia chinensis
Ah.12g052970 Amaranthus hybridus
AL7G29240 Arabidopsis lyrata
Aqoxy5G04302 Aquilegia oxysepala
Aqoxy5G04304 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.5YP9G9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.69PAS2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TJXZ67 Arachis hypogaea
AT4G24040 Arabidopsis thaliana
ATR0757G010 Amborella trichopoda
AUR62007025 Chenopodium quinoa
BcaC04g21340 Brassica carinata
BcaC09g50919 Brassica carinata
BcaNung01109 Brassica carinata
BcaNung05698 Brassica carinata
BcaNung06470 Brassica carinata
BolC1t01851H Brassica oleracea
BolC7t45827H Brassica oleracea
BolC9t56133H Brassica oleracea
BraA01t01475Z Brassica rapa
BraA03t14559Z Brassica rapa
C01p19260 Brassica napus
C07p53330 Brassica napus
C09p32980 Brassica napus
CAN.G567.64 Capsicum annuum
CAN.G567.65 Capsicum annuum
CAN.G715.3 Capsicum annuum
CANSAT21G0971 Cannabis sativa
CANSAT21G1016 Cannabis sativa
CARHR231440 Cardamine hirsuta
Carub.0007s1705 Capsella rubella
Ca_17451_v3 Cicer arietinum L.
Ca_29384_v3 Cicer arietinum L.
CBR_g24063 Chara braunii
Cc08_g16500 Coffea canephora
CDE04G3265 Ceratophyllum demersum
CDE07G1940 Ceratophyllum demersum
Cfa004925 Carpinus fangiana
Cfa011954 Carpinus fangiana
Cfa011956 Carpinus fangiana
Cfa011959 Carpinus fangiana
Cfa011970 Carpinus fangiana
Ciclev10000621m.g Citrus clementina
Ciclev10023271m.g Citrus clementina
Ciclev10033306m.g Citrus clementina
CiPaw.11G115400 Carya illinoinensis
CiPaw.11G115500 Carya illinoinensis
CiPaw.12G079900 Carya illinoinensis
ClCG01G001870 Citrullus lanatus
ClCG01G001880 Citrullus lanatus
COL.COLO4_10760 Corchorus olitorius
Cpa.g.sc15.13 Carica papaya
Cre03.g195600 Chlamydomonas reinhardtii
CsaV3_5G002020 Cucumis sativus L.
CSS0008297 Camellia sinensis var. sinensis
CSS0021198 Camellia sinensis var. sinensis
CSS0029461 Camellia sinensis var. sinensis
CSS0032814 Camellia sinensis var. sinensis
CSS0044761 Camellia sinensis var. sinensis
DCAR_010023 Daucus carota
Dinv02499 Davidia involucrata
Dinv02502 Davidia involucrata
Dinv06031 Davidia involucrata
Dinv06032 Davidia involucrata
Dinv23367 Davidia involucrata
Duzib205G0077 Durio zibethinus
ECA246G2504 Erigeron canadensis
EL10Ac1g01459 Beta vulgaris
EL10Ac5g12473 Beta vulgaris
Eucgr.E01027 Eucalyptus grandis
FAN04G2329 Fragaria x ananassa
FAN08G2572 Fragaria x ananassa
FAN13G1911 Fragaria x ananassa
FAN18G4027 Fragaria x ananassa
FvH4_5g11460 Fragaria vesca
Glyma.05G219800 Glycine max
Gohir.A02G096900 Gossypium hirsutum
Gohir.A11G019500 Gossypium hirsutum
Gohir.D03G086900 Gossypium hirsutum
Gohir.D11G019200 Gossypium hirsutum
Gorai.003G075200 Gossypium raimondii
Gorai.007G020500 Gossypium raimondii
GSVIVG01019610001 Vitis vinifera
HanXRQChr06g0166301 Helianthus annuus
Haze_09126 Corylus avellana
Haze_09134 Corylus avellana
Hma1.2p1_1835F.1_g304660 Hydrangea macrophylla
HPP92_014452 Vanilla planifolia
Hund11368 Selenicereus undatus
Lalb_Chr05g0223881 Lupinus albus
Lalb_Chr05g0223891 Lupinus albus
Lj4g0019041 Lotus japonicus
Lj8C203G7 Lonicera japonica
Lj8C203T14 Lonicera japonica
Lsat_1_v5_gn_3_12621 Lactuca sativa
Manes.01G053600 Manihot esculenta
Manes.02G005400 Manihot esculenta
Mapoly0014s0133 Marchantia polymorpha
Mapoly0055s0045 Marchantia polymorpha
MBI12_g15036_MAGBIO Magnolia biondii
MCO05G351 Micromonas commoda
MD06G1113500 Malus domestica
MD14G1134600 Malus domestica
Medtr8g099985 Medicago truncatula
MELO3C005751.2 Cucumis melo
Migut.I01165 Erythranthe guttata
MSTRG.24856 Avicennia marina
MSTRG.24857 Avicennia marina
Nitab4.5_0002439g0080 Nicotiana tabacum
Nitab4.5_0002439g0130 Nicotiana tabacum
Nitab4.5_0006889g0020 Nicotiana tabacum
Nitab4.5_0006889g0030 Nicotiana tabacum
Nn1g00321 Nelumbo nucifera
Nn7g36715 Nelumbo nucifera
Oeu009991.1 Olea europaea
Oeu009993.1 Olea europaea
Oeu009994.1 Olea europaea
Os10g0521000 Oryza sativa ssp. japonica
Peaxi162Scf00074g00435 Petunia axillaris
PGR031G0091 Punica granatum
PGR031G0912 Punica granatum
PGR031G2218 Punica granatum
PGR042G1639 Punica granatum
PGR042G3552 Punica granatum
PGSC0003DMG400012252 Solanum tuberosum
Phvul.002G301500 Phaseolus vulgaris
Potri.001G087100 Populus trichocarpa
Potri.003G143900 Populus trichocarpa
Potri.003G144000 Populus trichocarpa
Potri.006G068300 Populus trichocarpa
Pp3c16_7830 Physcomitrium patens
Pp3c23_11240 Physcomitrium patens
Pp3c24_9748 Physcomitrium patens
Pp3c24_9750 Physcomitrium patens
Pp3c5_16470 Physcomitrium patens
PRCOL_00003576 Prasinoderma coloniale
Prupe.5G126300 Prunus persica
Psat7g022760 Pisum sativum
PSO170G3423 Papaver somniferum
QL02p028401 Quercus lobata
QL02p028402 Quercus lobata
QL02p028412 Quercus lobata
QL02p028420 Quercus lobata
RcHm_v2.0_Chr6g0261321 Rosa chinensis
RcHm_v2.0_Chr7g0186361 Rosa chinensis
Rhsim02G0248900 Rhododendron simsii
Rhsim07G0079700 Rhododendron simsii
Rhsim08G0015900 Rhododendron simsii
Rhsim08G0020400 Rhododendron simsii
Sabra01G0063300 Salix brachista
Sabra03G0104300 Salix brachista
Sabra03G0104400 Salix brachista
SalBow6G0547 Salvia bowleyana
Sc01g0010480 Simmondsia chinensis
Sed0019208 Sechium edule
SEGI_01865 Sequoiadendron giganteum
SEGI_04080 Sequoiadendron giganteum
SEGI_06448 Sequoiadendron giganteum
SEGI_13496 Sequoiadendron giganteum
SEGI_32363 Sequoiadendron giganteum
SGA_v2.0_scaffold198G41058 Striga asiatica
SHI06939 Sapria himalayana
SHI06941 Sapria himalayana
SMO119G0122 Selaginella moellendorffii
SMO165G0094 Selaginella moellendorffii
SMO165G0115 Selaginella moellendorffii
SMO272G0034 Selaginella moellendorffii
Solyc08g082860.4 Solanum lycopersicum
Sopen08g031090 Solanum pennellii
Sp7g22010 Schrenkiella parvula
TAR629G3421 Trochodendron aralioides
THA.LOC104806447 Tarenaya hassleriana
Thecc.03G304400 Theobroma cacao
Thecc.03G304700 Theobroma cacao
Thecc.03G304900 Theobroma cacao
Thecc.03G305100 Theobroma cacao
Thhalv10024684m.g Eutrema salsugineum
TPR.G3439 Trifolium pratense
TPR.G36092 Trifolium pratense
TPR.G40004 Trifolium pratense
TWI60G0449 Tripterygium wilfordii
TWI60G0599 Tripterygium wilfordii
unitig_1.g29357 Utricularia gibba
unitig_1.g29358 Utricularia gibba
unitig_747.g22055 Utricularia gibba
vmacro09227 Vaccinium macrocarpon
vmacro09228 Vaccinium macrocarpon
vmacro11524 Vaccinium macrocarpon
vmacro13868 Vaccinium macrocarpon
vmacro22586 Vaccinium macrocarpon
VMungo0251G0959 Vigna mungo
Zm00001eb021270 Zea mays

User provided reference genes

Program Settings