Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p13570 Brassica napus
Aa31LG2G17580 Aethionema arabicum
Aa31LG2G17590 Aethionema arabicum
Aa31LG7G2510 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2764 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2852 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2853 Anthoceros agrestis
Actinidia02458 Actinidia chinensis
Actinidia02459 Actinidia chinensis
Actinidia21939 Actinidia chinensis
Ah.13g068630 Amaranthus hybridus
Ah.15g095790 Amaranthus hybridus
AL1G30030 Arabidopsis lyrata
Aqoxy4G02849 Aquilegia oxysepala
Aqoxy6G00028 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.046I3L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M9HC5A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QWX0VP Arachis hypogaea
AT1G17680 Arabidopsis thaliana
ATR0002G001 Amborella trichopoda
ATR1089G047 Amborella trichopoda
Atru.chr9.1130 Acer truncatum
AUR62000094 Chenopodium quinoa
AUR62008300 Chenopodium quinoa
AUR62031062 Chenopodium quinoa
AUR62039415 Chenopodium quinoa
BcaB02g08777 Brassica carinata
BcaB07g34024 Brassica carinata
BcaC02g11929 Brassica carinata
BcaC02g12573 Brassica carinata
BcaC02g12574 Brassica carinata
BcaC05g25689 Brassica carinata
BolC4t22588H Brassica oleracea
BolC5t30309H Brassica oleracea
BraA06t24509Z Brassica rapa
C04p00480 Brassica napus
C04p00500 Brassica napus
C04p09790 Brassica napus
C05p16090 Brassica napus
CAN.G14.42 Capsicum annuum
CANSAT78G0348 Cannabis sativa
CARHR018280 Cardamine hirsuta
Carub.0001s1741 Capsella rubella
Ca_16137_v3 Cicer arietinum L.
Ca_16139_v3 Cicer arietinum L.
Ca_16140_v3 Cicer arietinum L.
Ca_19033_v3 Cicer arietinum L.
Ca_19034_v3 Cicer arietinum L.
Ca_19036_v3 Cicer arietinum L.
CBR_g36749 Chara braunii
Cc00_g11470 Coffea canephora
Cc00_g33310 Coffea canephora
Cc05_g03240 Coffea canephora
CDE05G0531 Ceratophyllum demersum
CDE05G3544 Ceratophyllum demersum
Cfa008023 Carpinus fangiana
Ciclev10019721m.g Citrus clementina
Ciclev10020572m.g Citrus clementina
Ciclev10026956m.g Citrus clementina
CiPaw.03G010300 Carya illinoinensis
ClCG07G013810 Citrullus lanatus
COL.COLO4_25120 Corchorus olitorius
COL.COLO4_25121 Corchorus olitorius
Cpa.g.sc21.244 Carica papaya
Cpa.g.sc21.245 Carica papaya
Cpa.g.sc21.247 Carica papaya
Cre10.g464950 Chlamydomonas reinhardtii
CsaV3_3G043790 Cucumis sativus L.
CSS0010807 Camellia sinensis var. sinensis
DCAR_001477 Daucus carota
Dinv15687 Davidia involucrata
Dinv28114 Davidia involucrata
Duzib235G0325 Durio zibethinus
ECA232G2309 Erigeron canadensis
EL10Ac5g10434 Beta vulgaris
EL10Ac5g10861 Beta vulgaris
Eucgr.G01221 Eucalyptus grandis
FAN02G0848 Fragaria x ananassa
FAN09G4617 Fragaria x ananassa
FAN14G5376 Fragaria x ananassa
FAN15G0576 Fragaria x ananassa
FAN20G1461 Fragaria x ananassa
FAN20G2279 Fragaria x ananassa
FAN24G3399 Fragaria x ananassa
FAN27G0386 Fragaria x ananassa
FvH4_2g25610 Fragaria vesca
FvH4_6g37900 Fragaria vesca
FvH4_6g38030 Fragaria vesca
FvH4_6g38050 Fragaria vesca
Glyma.04G168200 Glycine max
Glyma.07G124800 Glycine max
Glyma.11G102000 Glycine max
Glyma.12G027700 Glycine max
Gohir.A12G230000 Gossypium hirsutum
Gohir.D12G231100 Gossypium hirsutum
Gorai.008G247300 Gossypium raimondii
GSVIVG01036699001 Vitis vinifera
HanXRQChr09g0266911 Helianthus annuus
HanXRQChr13g0406831 Helianthus annuus
Haze_14033 Corylus avellana
Haze_14034 Corylus avellana
Haze_14035 Corylus avellana
HPP92_015320 Vanilla planifolia
Hund09398 Selenicereus undatus
Lalb_Chr07g0195581 Lupinus albus
Lj1g0005967 Lotus japonicus
Lj9A422T76 Lonicera japonica
Lj9A422T77 Lonicera japonica
Lj9A422T78 Lonicera japonica
Lj9C162G1 Lonicera japonica
Lj9C173G0 Lonicera japonica
Lsat_1_v5_gn_0_35341 Lactuca sativa
Lsat_1_v5_gn_2_90320 Lactuca sativa
Lsat_1_v5_gn_4_131841 Lactuca sativa
Manes.06G016500 Manihot esculenta
Mapoly0024s0108 Marchantia polymorpha
MBI03_g18641_MAGBIO Magnolia biondii
MCO03G148 Micromonas commoda
MD09G1155000 Malus domestica
MD17G1140900 Malus domestica
MD17G1141000 Malus domestica
MD17G1141100 Malus domestica
Medtr4g074690 Medicago truncatula
Medtr4g074700 Medicago truncatula
Medtr4g074860 Medicago truncatula
Medtr4g079390 Medicago truncatula
MELO3C013095.2 Cucumis melo
Migut.C00329 Erythranthe guttata
MSTRG.1003 Avicennia marina
Nitab4.5_0002354g0130 Nicotiana tabacum
Nitab4.5_0002906g0070 Nicotiana tabacum
Nitab4.5_0003757g0100 Nicotiana tabacum
Nitab4.5_0005224g0040 Nicotiana tabacum
Nn5g27173 Nelumbo nucifera
Oeu019664.1 Olea europaea
Oeu026515.1 Olea europaea
Oeu035042.1 Olea europaea
Os11g0266800 Oryza sativa ssp. japonica
Peaxi162Scf00015g00107 Petunia axillaris
Peaxi162Scf00818g00323 Petunia axillaris
PGSC0003DMG400033134 Solanum tuberosum
Phvul.011G031000 Phaseolus vulgaris
Potri.013G094050 Populus trichocarpa
Potri.013G128900 Populus trichocarpa
Potri.013G129500 Populus trichocarpa
Pp3c8_10360 Physcomitrium patens
Pp3c8_10366 Physcomitrium patens
PRCOL_00004204 Prasinoderma coloniale
Prupe.8G070000 Prunus persica
Psat0s2166g0160 Pisum sativum
Psat0s3379g0040 Pisum sativum
Psat0s3379g0080 Pisum sativum
PSO170G4646 Papaver somniferum
QL01p054481 Quercus lobata
QL09p054764 Quercus lobata
QL09p054785 Quercus lobata
RcHm_v2.0_Chr2g0151071 Rosa chinensis
RcHm_v2.0_Chr2g0151101 Rosa chinensis
RcHm_v2.0_Chr6g0293861 Rosa chinensis
Rhsim12G0000800 Rhododendron simsii
SalBow7G2370 Salvia bowleyana
Sc09g0010840 Simmondsia chinensis
Sed0013857 Sechium edule
SEGI_05114 Sequoiadendron giganteum
SEGI_08666 Sequoiadendron giganteum
SEGI_26656 Sequoiadendron giganteum
SEGI_31377 Sequoiadendron giganteum
SEGI_39938 Sequoiadendron giganteum
SGA_v2.0_scaffold8G04312 Striga asiatica
SHI03012 Sapria himalayana
SHI03013 Sapria himalayana
SHI03014 Sapria himalayana
SHI03015 Sapria himalayana
SMO164G0159 Selaginella moellendorffii
Solyc06g063420.4 Solanum lycopersicum
Sopen06g022880 Solanum pennellii
Sp1g15780 Schrenkiella parvula
Sp4g05220 Schrenkiella parvula
TAR628G0771 Trochodendron aralioides
TAR633G1289 Trochodendron aralioides
TAR633G1719 Trochodendron aralioides
THA.LOC104800339 Tarenaya hassleriana
THA.LOC104807542 Tarenaya hassleriana
Thecc.08G168800 Theobroma cacao
Thhalv10002713m.g Eutrema salsugineum
Thhalv10006758m.g Eutrema salsugineum
TPR.G32330 Trifolium pratense
TPR.G38733 Trifolium pratense
TWI38G1177 Tripterygium wilfordii
unitig_26.g9845 Utricularia gibba
vmacro00914 Vaccinium macrocarpon
vmacro23125 Vaccinium macrocarpon
VMungo1127G1034 Vigna mungo
VMungo1127G1455 Vigna mungo
VMungo1127G1934 Vigna mungo
Zm00001eb171180 Zea mays

User provided reference genes

Program Settings