Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p07220 Brassica napus
A03p32840 Brassica napus
A05p45080 Brassica napus
Aa31LG11G13970 Aethionema arabicum
Aa31LG5G12730 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.3585 Anthoceros agrestis
Actinidia04538 Actinidia chinensis
Actinidia17593 Actinidia chinensis
Actinidia26257 Actinidia chinensis
AL3G11450 Arabidopsis lyrata
AL6G26470 Arabidopsis lyrata
Aqoxy3G03656 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.87INZE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S4R36H Arachis hypogaea
AT3G02200 Arabidopsis thaliana
AT5G15610 Arabidopsis thaliana
ATR0794G008 Amborella trichopoda
ATR0827G178 Amborella trichopoda
Atru.chr8.508 Acer truncatum
AUR62004181 Chenopodium quinoa
AUR62013681 Chenopodium quinoa
BcaB01g05043 Brassica carinata
BcaC01g04456 Brassica carinata
BcaC01g04475 Brassica carinata
BcaC01g04476 Brassica carinata
BcaC01g04477 Brassica carinata
BcaC05g30332 Brassica carinata
BcaC09g47686 Brassica carinata
BNapus_Darmor_BZH_scaffold_113p00190 Brassica napus
BolC1t05918H Brassica oleracea
BolC3t13319H Brassica oleracea
BolC3t16262H Brassica oleracea
BolC5t35100H Brassica oleracea
BraA01t04626Z Brassica rapa
BraA03t10044Z Brassica rapa
BraA03t12453Z Brassica rapa
BraA05t23153Z Brassica rapa
C03p08220 Brassica napus
C03p39970 Brassica napus
C09p75580 Brassica napus
CAN.G497.93 Capsicum annuum
CANSAT64G0930 Cannabis sativa
CARHR076170 Cardamine hirsuta
CARHR197710 Cardamine hirsuta
Carub.0003s0132 Capsella rubella
Carub.0006s1377 Capsella rubella
Ca_04310_v3 Cicer arietinum L.
CBR_g38096 Chara braunii
Cc00_g06870 Coffea canephora
Cc07_g04370 Coffea canephora
CDE09G0770 Ceratophyllum demersum
CDE09G1009 Ceratophyllum demersum
Cfa007317 Carpinus fangiana
Ciclev10011854m.g Citrus clementina
CiPaw.03G087400 Carya illinoinensis
CiPaw.04G054200 Carya illinoinensis
ClCG11G004850 Citrullus lanatus
COL.COLO4_02772 Corchorus olitorius
Cpa.g.sc14.196 Carica papaya
Cre09.g417200 Chlamydomonas reinhardtii
CsaV3_5G038560 Cucumis sativus L.
CSS0027598 Camellia sinensis var. sinensis
CSS0034610 Camellia sinensis var. sinensis
CSS0040085 Camellia sinensis var. sinensis
DCAR_011034 Daucus carota
Dinv33837 Davidia involucrata
Duzib147G0154 Durio zibethinus
Duzib264G0955 Durio zibethinus
ECA238G0586 Erigeron canadensis
ECA246G2096 Erigeron canadensis
ECA247G2972 Erigeron canadensis
EL10Ac1g00859 Beta vulgaris
EL10As12g24037 Beta vulgaris
Eucgr.I02041 Eucalyptus grandis
FAN02G3143 Fragaria x ananassa
FAN05G4304 Fragaria x ananassa
FAN09G2387 Fragaria x ananassa
FAN14G2996 Fragaria x ananassa
FvH4_6g46660 Fragaria vesca
Glyma.10G140700 Glycine max
Glyma.13G055200 Glycine max
Glyma.20G089400 Glycine max
Gohir.A05G381100 Gossypium hirsutum
Gohir.A09G008500 Gossypium hirsutum
Gohir.A09G008600 Gossypium hirsutum
Gohir.D04G034300 Gossypium hirsutum
Gohir.D09G007900 Gossypium hirsutum
Gorai.006G009500 Gossypium raimondii
Gorai.012G038600 Gossypium raimondii
GSVIVG01032900001 Vitis vinifera
HanXRQChr04g0103071 Helianthus annuus
HanXRQChr15g0472411 Helianthus annuus
HanXRQChr17g0546121 Helianthus annuus
Haze_14415 Corylus avellana
Hma1.2p1_0069F.1_g037360 Hydrangea macrophylla
Hma1.2p1_1555F.1_g290410 Hydrangea macrophylla
Hund17038 Selenicereus undatus
Lalb_Chr02g0158861 Lupinus albus
Lalb_Chr06g0174911 Lupinus albus
Lalb_Chr21g0318331 Lupinus albus
Lalb_Chr21g0318341 Lupinus albus
Lj1A454T5 Lonicera japonica
Lj1A457T7 Lonicera japonica
Lj2g0003959 Lotus japonicus
Lj4A121T77 Lonicera japonica
Lj4A470T16 Lonicera japonica
Lju967A0G13 Lonicera japonica
Lsat_1_v5_gn_2_89540 Lactuca sativa
Lsat_1_v5_gn_3_95981 Lactuca sativa
Manes.01G094700 Manihot esculenta
Manes.02G056600 Manihot esculenta
Mapoly0097s0065 Marchantia polymorpha
MBI19_g21275_MAGBIO Magnolia biondii
MCO16G226 Micromonas commoda
MD09G1068800 Malus domestica
MD17G1061800 Malus domestica
MD17G1062000 Malus domestica
MD17G1062900 Malus domestica
Medtr6g015395 Medicago truncatula
Medtr7g091480 Medicago truncatula
MELO3C000027.2 Cucumis melo
MELO3C001165.2 Cucumis melo
MELO3C001701.2 Cucumis melo
MELO3C022038.2 Cucumis melo
Migut.K01264 Erythranthe guttata
MSTRG.15442 Avicennia marina
MSTRG.3364 Avicennia marina
Nitab4.5_0000212g0320 Nicotiana tabacum
Nitab4.5_0003932g0020 Nicotiana tabacum
Nitab4.5_0005596g0050 Nicotiana tabacum
Nitab4.5_0009044g0070 Nicotiana tabacum
Nn3g17485 Nelumbo nucifera
Nn8g40361 Nelumbo nucifera
Oeu004418.1 Olea europaea
Oeu007070.2 Olea europaea
Os04g0103200 Oryza sativa ssp. japonica
Peaxi162Scf00043g00181 Petunia axillaris
Peaxi162Scf00166g00342 Petunia axillaris
Peaxi162Scf00563g00315 Petunia axillaris
Peaxi162Scf00991g00014 Petunia axillaris
PGR004G0056 Punica granatum
PGSC0003DMG400001365 Solanum tuberosum
PGSC0003DMG400037406 Solanum tuberosum
PGSC0003DMG400040047 Solanum tuberosum
PGSC0003DMG400041699 Solanum tuberosum
Phvul.004G038200 Phaseolus vulgaris
Phvul.007G207400 Phaseolus vulgaris
Potri.004G116700 Populus trichocarpa
Potri.017G095300 Populus trichocarpa
Pp3c14_18640 Physcomitrium patens
Pp3c14_18645 Physcomitrium patens
Pp3c17_21330 Physcomitrium patens
Pp3c17_21340 Physcomitrium patens
PRCOL_00006512 Prasinoderma coloniale
Prupe.3G252000 Prunus persica
Psat1g068920 Pisum sativum
PSO017G2371 Papaver somniferum
PSO478G0569 Papaver somniferum
QL02p067326 Quercus lobata
QL93p0053_1015 Quercus lobata
RcHm_v2.0_Chr2g0157101 Rosa chinensis
RcHm_v2.0_Chr2g0165331 Rosa chinensis
RcHm_v2.0_Chr2g0165441 Rosa chinensis
RcHm_v2.0_Chr2g0165451 Rosa chinensis
RcHm_v2.0_Chr2g0165551 Rosa chinensis
Sabra04G0070200 Salix brachista
Sabra17G0084500 Salix brachista
SabraUnG0001900 Salix brachista
SalBow1G0092 Salvia bowleyana
Sc26g0001300 Simmondsia chinensis
Sed0017731 Sechium edule
SEGI_08931 Sequoiadendron giganteum
SEGI_28709 Sequoiadendron giganteum
SGA_v2.0_scaffold148G36428 Striga asiatica
SGA_v2.0_scaffold154G37123 Striga asiatica
SGA_v2.0_scaffold79G25605 Striga asiatica
SMO174G0231 Selaginella moellendorffii
SMO174G0265 Selaginella moellendorffii
Solyc02g089070.3 Solanum lycopersicum
Sopen02g033830 Solanum pennellii
Sopen11g023010 Solanum pennellii
Sp3g01270 Schrenkiella parvula
Sp6g28490 Schrenkiella parvula
TAR371G0709 Trochodendron aralioides
TAR622G0123 Trochodendron aralioides
TAR622G0706 Trochodendron aralioides
THA.LOC104822323 Tarenaya hassleriana
Thecc.04G097900 Theobroma cacao
Thhalv10013660m.g Eutrema salsugineum
Thhalv10020815m.g Eutrema salsugineum
TPR.G4293 Trifolium pratense
TWI32G0721 Tripterygium wilfordii
TWI34G1947 Tripterygium wilfordii
unitig_748.g8420 Utricularia gibba
vmacro18140 Vaccinium macrocarpon
VMungo0720G0561 Vigna mungo
Zm00001eb337010 Zea mays

User provided reference genes

Program Settings