Gene: AT5G15610

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G15610
  • Transcript Identifier AT5G15610.2
  • Gene Type Coding gene
  • Location Chr5 : 5079579-5081929 : positive

Gene Family Information

  • ID HOM05D003455
  • #Genes/#Species 197/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G15610.2
  • uniprot Q9LF21

Descriptions

  • Description Proteasome component (PCI) domain protein
  • Computational description Proteasome component (PCI) domain protein; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: Proteasome component (PCI) domain protein (TAIR:AT3G02200.2); Has 426 Blast hits to 426 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 183; Fungi - 114; Plants - 66; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).
  • Computational description Proteasome component (PCI) domain protein; CONTAINS InterPro DOMAIN/s: Proteasome component (PCI) domain (InterPro:IPR000717); BEST Arabidopsis thaliana protein match is: Proteasome component (PCI) domain protein (TAIR:AT3G02200.2); Has 694 Blast hits to 694 proteins in 209 species: Archae - 0; Bacteria - 0; Metazoa - 312; Fungi - 189; Plants - 98; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0002183
IEA
GOA Databasecytoplasmic translational initiation
GO:0002183
IBA
Gene Ontologycytoplasmic translational initiation1
GO:0001732
IEA
GOA Databaseformation of cytoplasmic translation initiation complex
GO:0006412
IEA
GOA Databasetranslation
GO:0006413
IEA
GOA Databasetranslational initiation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003743
IEA
GOA Databasetranslation initiation factor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0009536
HDA
Gene Ontologyplastid2
GO:0005852
IEA
GOA Databaseeukaryotic translation initiation factor 3 complex
GO:0005852
IBA
Gene Ontologyeukaryotic translation initiation factor 3 complex1
GO:0033290
IEA
GOA Databaseeukaryotic 48S preinitiation complex
GO:0016282
IEA
GOA Databaseeukaryotic 43S preinitiation complex
GO:0071541
IEA
GOA Databaseeukaryotic translation initiation factor 3 complex, eIF3m
GO:0000502
IEA
GOA Databaseproteasome complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000717 Proteasome component (PCI) domain
IPR040750 eIF3 subunit M, C-terminal helix domain
Mapman id Description
17.4.1.3.13 Protein biosynthesis.translation initiation.Pre-Initiation Complex (PIC) module.eIF3 mRNA-to-PIC binding complex.component eIF3m