Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p15310 Brassica napus
A02p18670 Brassica napus
A04p11780 Brassica napus
A04p21520 Brassica napus
A05p13450 Brassica napus
A05p19340 Brassica napus
A07p12440 Brassica napus
A08p26810 Brassica napus
A09p39090 Brassica napus
Aa31LG7G9280 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.396 Anthoceros agrestis
Actinidia00219 Actinidia chinensis
Actinidia39056 Actinidia chinensis
Ah.04g149460 Amaranthus hybridus
AL1G40100 Arabidopsis lyrata
Aqoxy4G02442 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.I5HCXG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N8P1ZJ Arachis hypogaea
AT1G25260 Arabidopsis thaliana
ATR0085G001 Amborella trichopoda
ATR0174G027 Amborella trichopoda
Atru.chr6.1030 Acer truncatum
Atru.chr6.1079 Acer truncatum
AUR62018551 Chenopodium quinoa
AUR62020868 Chenopodium quinoa
BcaB03g12039 Brassica carinata
BcaB03g14023 Brassica carinata
BcaB03g16170 Brassica carinata
BcaB04g18067 Brassica carinata
BcaB08g35512 Brassica carinata
BcaC01g01674 Brassica carinata
BcaC05g24499 Brassica carinata
BcaC05g26486 Brassica carinata
BcaC05g26690 Brassica carinata
BcaC05g27507 Brassica carinata
BcaC06g34618 Brassica carinata
BcaC06g35235 Brassica carinata
BcaC07g37686 Brassica carinata
BcaC08g45659 Brassica carinata
BolC3t19610H Brassica oleracea
BolC5t28997H Brassica oleracea
BolC5t29949H Brassica oleracea
BolC5t31269H Brassica oleracea
BolC5t32205H Brassica oleracea
BolC6t38529H Brassica oleracea
BolC7t42349H Brassica oleracea
BraA04t16596Z Brassica rapa
BraA05t20823Z Brassica rapa
BraA07t29025Z Brassica rapa
BraA08t34627Z Brassica rapa
BraA09t39409Z Brassica rapa
C03p73140 Brassica napus
C05p02190 Brassica napus
C05p25340 Brassica napus
C06p34150 Brassica napus
C07p18390 Brassica napus
C07p26410 Brassica napus
CAN.G1352.24 Capsicum annuum
CANSAT11G1865 Cannabis sativa
CARHR026300 Cardamine hirsuta
CARHR057180 Cardamine hirsuta
Carub.0001s2531 Capsella rubella
Ca_00090_v3 Cicer arietinum L.
Ca_29929_v3 Cicer arietinum L.
CBR_g26270 Chara braunii
Cc02_g22270 Coffea canephora
CDE06G1320 Ceratophyllum demersum
CDE12G0598 Ceratophyllum demersum
Cfa014508 Carpinus fangiana
Cfa023894 Carpinus fangiana
Ciclev10002376m.g Citrus clementina
CiPaw.05G042700 Carya illinoinensis
CiPaw.06G149000 Carya illinoinensis
ClCG02G000650 Citrullus lanatus
COL.COLO4_17896 Corchorus olitorius
Cpa.g.sc2.27 Carica papaya
Cre06.g261700 Chlamydomonas reinhardtii
CsaV3_1G025580 Cucumis sativus L.
CsaV3_2G018120 Cucumis sativus L.
CSS0006665 Camellia sinensis var. sinensis
DCAR_013995 Daucus carota
Dinv19350 Davidia involucrata
Dinv19351 Davidia involucrata
Dinv24261 Davidia involucrata
Duzib132G0664 Durio zibethinus
Duzib248G1379 Durio zibethinus
ECA236G3864 Erigeron canadensis
EL10Ac3g07449 Beta vulgaris
EL10Ac8g19160 Beta vulgaris
Eucgr.I02710 Eucalyptus grandis
FAN04G1904 Fragaria x ananassa
FAN08G2387 Fragaria x ananassa
FAN13G1098 Fragaria x ananassa
FAN18G1423 Fragaria x ananassa
FvH4_5g30060 Fragaria vesca
Glyma.08G184300 Glycine max
Glyma.15G048200 Glycine max
Gohir.A01G176900 Gossypium hirsutum
Gohir.D01G167700 Gossypium hirsutum
Gorai.002G208400 Gossypium raimondii
GSVIVG01023018001 Vitis vinifera
HanXRQChr01g0021831 Helianthus annuus
HanXRQChr03g0066511 Helianthus annuus
HanXRQChr05g0149671 Helianthus annuus
HanXRQChr07g0193031 Helianthus annuus
HanXRQChr10g0305141 Helianthus annuus
Haze_13054 Corylus avellana
Hma1.2p1_0217F.1_g091920 Hydrangea macrophylla
Hma1.2p1_0557F.1_g178330 Hydrangea macrophylla
Hma1.2p1_0557F.1_g178340 Hydrangea macrophylla
Hma1.2p1_1038F.1_g250760 Hydrangea macrophylla
Hma1.2p1_2850F.1_g329406 Hydrangea macrophylla
HPP92_015419 Vanilla planifolia
HPP92_026977 Vanilla planifolia
Hund19013 Selenicereus undatus
Hund24426 Selenicereus undatus
Lalb_Chr15g0090611 Lupinus albus
Lalb_Chr18g0060821 Lupinus albus
Lj6g0011327 Lotus japonicus
Lj9A308T36 Lonicera japonica
Lsat_1_v5_gn_7_77981 Lactuca sativa
Lsat_1_v5_gn_9_116360 Lactuca sativa
Manes.07G013300 Manihot esculenta
Manes.10G132200 Manihot esculenta
Mapoly0015s0017 Marchantia polymorpha
MBI15_g28822_MAGBIO Magnolia biondii
MCO04G167 Micromonas commoda
MD08G1225200 Malus domestica
MD15G1418800 Malus domestica
Medtr2g007780 Medicago truncatula
MELO3C023261.2 Cucumis melo
MELO3C034572.2 Cucumis melo
Migut.B00667 Erythranthe guttata
MSTRG.16533 Avicennia marina
Nitab4.5_0005539g0060 Nicotiana tabacum
Nitab4.5_0010140g0020 Nicotiana tabacum
Nn2g13208 Nelumbo nucifera
Oeu000195.1 Olea europaea
Oeu026055.1 Olea europaea
Oeu046769.1 Olea europaea
Os11g0105400 Oryza sativa ssp. japonica
Os12g0105200 Oryza sativa ssp. japonica
Peaxi162Scf00011g00014 Petunia axillaris
PGR142G4046 Punica granatum
PGSC0003DMG400023745 Solanum tuberosum
Phvul.006G212200 Phaseolus vulgaris
Potri.001G460100 Populus trichocarpa
Potri.011G156300 Populus trichocarpa
Pp3c11_25500 Physcomitrium patens
Pp3s128_30 Physcomitrium patens
PRCOL_00006634 Prasinoderma coloniale
Prupe.1G562900 Prunus persica
Psat1g220040 Pisum sativum
PSO017G6291 Papaver somniferum
PSO017G6449 Papaver somniferum
PSO063G0979 Papaver somniferum
PSO170G0877 Papaver somniferum
PSO170G4153 Papaver somniferum
PSO173G0151 Papaver somniferum
PSO210G4636 Papaver somniferum
PSO339G0293 Papaver somniferum
PSO447G0223 Papaver somniferum
PSO478G5253 Papaver somniferum
PSO801G0645 Papaver somniferum
QL02p098641 Quercus lobata
RcHm_v2.0_Chr7g0224251 Rosa chinensis
Rhsim11G0131700 Rhododendron simsii
Sabra11G0143500 Salix brachista
Sabra16G0311800 Salix brachista
SalBow6G0908 Salvia bowleyana
Sc11g0006640 Simmondsia chinensis
Sed0002836 Sechium edule
Sed0006026 Sechium edule
SEGI_29948 Sequoiadendron giganteum
SEGI_34754 Sequoiadendron giganteum
SEGI_37042 Sequoiadendron giganteum
SGA_v2.0_scaffold110G31286 Striga asiatica
SGA_v2.0_scaffold1G00326 Striga asiatica
SHI16687 Sapria himalayana
SMO367G0584 Selaginella moellendorffii
Solyc01g104470.3 Solanum lycopersicum
Sopen01g046970 Solanum pennellii
Sp1g23030 Schrenkiella parvula
TAR633G0411 Trochodendron aralioides
TAR636G0765 Trochodendron aralioides
TAR636G2181 Trochodendron aralioides
THA.LOC104807949 Tarenaya hassleriana
Thecc.02G041300 Theobroma cacao
Thhalv10008680m.g Eutrema salsugineum
TPR.G39937 Trifolium pratense
TWI14G0641 Tripterygium wilfordii
TWI23G0077 Tripterygium wilfordii
unitig_22.g6119 Utricularia gibba
vmacro01777 Vaccinium macrocarpon
VMungo0540G2199 Vigna mungo
Zm00001eb026620 Zea mays
Zm00001eb078820 Zea mays
Zm00001eb094240 Zea mays
Zm00001eb163260 Zea mays

User provided reference genes

Program Settings