Gene: Solyc01g104470.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g104470.3
  • Transcript Identifier Solyc01g104470.3.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 85242418-85244975 : negative

Gene Family Information

  • ID HOM05D003431
  • #Genes/#Species 199/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g104470.3.1
  • uniprot A0A3Q7EQN8
  • gene_id Solyc01g104470

Descriptions

  • Description Ribosome assembly factor mrt4 (AHRD V3.3 *** A0A328DGN8_9ASTE)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000027
IEA
GOA Databaseribosomal large subunit assembly
GO:0000027
IEA
InterProribosomal large subunit assembly
GO:0042254
IEA
GOA Databaseribosome biogenesis
GO:0042273
IBA
GOA Databaseribosomal large subunit biogenesis
GO:0006364
IBA
GOA DatabaserRNA processing
GO:0000956
IBA
GOA Databasenuclear-transcribed mRNA catabolic process
GO:0042255
ISO
PLAZA Integrative Orthologyribosome assembly AT1G25260

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
ISO
PLAZA Integrative Orthologystructural constituent of ribosome AT1G25260

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
IBA
IEA
GOA Databasenucleolus
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005634
IEA
GOA Databasenucleus
GO:0030687
IBA
GOA Databasepreribosome, large subunit precursor
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT1G25260
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G25260

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR043141 Ribosomal protein L10-like domain superfamily
IPR033867 Ribosome assembly factor Mrt4
IPR040637 60S ribosomal protein L10P, insertion domain
IPR001790 Ribosomal protein L10P
IPR043164 50S ribosomal protein L10, insertion domain superfamily
Mapman id Description
17.1.2.2.2.6 Protein biosynthesis.ribosome biogenesis.large ribosomal subunit (LSU).LSU processome.pre-60S ribosomal subunit nuclear export.export factor (MRT4)