Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p47590 Brassica napus
A09p20730 Brassica napus
A10p02530 Brassica napus
Aa31LG1G20770 Aethionema arabicum
Aa31LG5G3300 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.1763 Anthoceros agrestis
Actinidia09517 Actinidia chinensis
Actinidia39930 Actinidia chinensis
Ah.10g030800 Amaranthus hybridus
AL1G13670 Arabidopsis lyrata
AL8G16140 Arabidopsis lyrata
Aqoxy2G00979 Aquilegia oxysepala
AT1G04070 Arabidopsis thaliana
AT5G43970 Arabidopsis thaliana
Atru.chr4.1916 Acer truncatum
Atru.chr5.1834 Acer truncatum
AUR62015270 Chenopodium quinoa
AUR62018067 Chenopodium quinoa
AUR62037221 Chenopodium quinoa
BcaB07g30549 Brassica carinata
BcaB07g30984 Brassica carinata
BcaC03g16619 Brassica carinata
BcaC04g21879 Brassica carinata
BcaC05g24474 Brassica carinata
BcaC06g34608 Brassica carinata
BcaC06g34614 Brassica carinata
BcaC06g34615 Brassica carinata
BolC2t10496H Brassica oleracea
BolC5t29012H Brassica oleracea
BolC7t43173H Brassica oleracea
BolC7t43180H Brassica oleracea
BolC9t55525H Brassica oleracea
BraA06t27627Z Brassica rapa
BraA09t37677Z Brassica rapa
BraA10t42522Z Brassica rapa
C02p44520 Brassica napus
C07p26430 Brassica napus
C07p26530 Brassica napus
C09p26240 Brassica napus
CAN.G638.38 Capsicum annuum
CAN.G941.30 Capsicum annuum
CANSAT01G0813 Cannabis sativa
CANSAT78G1185 Cannabis sativa
CARHR003410 Cardamine hirsuta
CARHR179430 Cardamine hirsuta
Carub.0001s0322 Capsella rubella
Carub.0008s0458 Capsella rubella
Ca_09650_v3 Cicer arietinum L.
Ca_11898_v3 Cicer arietinum L.
Cc03_g06290 Coffea canephora
CDE01G0063 Ceratophyllum demersum
CDE02G3003 Ceratophyllum demersum
CDE08G0388 Ceratophyllum demersum
Cfa002479 Carpinus fangiana
Cfa014780 Carpinus fangiana
Cfa021012 Carpinus fangiana
Ciclev10006291m.g Citrus clementina
CiPaw.01G178000 Carya illinoinensis
CiPaw.02G107100 Carya illinoinensis
CiPaw.03G270300 Carya illinoinensis
COL.COLO4_10574 Corchorus olitorius
COL.COLO4_15962 Corchorus olitorius
COL.COLO4_28885 Corchorus olitorius
Cpa.g.sc87.22 Carica papaya
CsaV3_2G012420 Cucumis sativus L.
CsaV3_3G011700 Cucumis sativus L.
CSS0004045 Camellia sinensis var. sinensis
CSS0024044 Camellia sinensis var. sinensis
CSS0029259 Camellia sinensis var. sinensis
DCAR_000567 Daucus carota
Dinv16396 Davidia involucrata
Duzib133G1351 Durio zibethinus
Duzib138G1667 Durio zibethinus
Duzib151G0669 Durio zibethinus
Duzib212G0034 Durio zibethinus
ECA232G0562 Erigeron canadensis
ECA238G3201 Erigeron canadensis
EL10Ac3g06578 Beta vulgaris
Eucgr.K01430 Eucalyptus grandis
FAN15G2918 Fragaria x ananassa
FAN23G3142 Fragaria x ananassa
FAN24G0274 Fragaria x ananassa
FAN27G2598 Fragaria x ananassa
FvH4_2g20580 Fragaria vesca
Glyma.10G040200 Glycine max
Glyma.11G168500 Glycine max
Glyma.11G177400 Glycine max
Glyma.13G126900 Glycine max
Gohir.A07G151800 Gossypium hirsutum
Gohir.A07G204200 Gossypium hirsutum
Gohir.A08G192000 Gossypium hirsutum
Gohir.A10G107800 Gossypium hirsutum
Gohir.D07G158100 Gossypium hirsutum
Gohir.D07G210200 Gossypium hirsutum
Gohir.D08G210000 Gossypium hirsutum
Gohir.D10G158500 Gossypium hirsutum
Gorai.001G181300 Gossypium raimondii
Gorai.001G237600 Gossypium raimondii
Gorai.004G222400 Gossypium raimondii
Gorai.011G178100 Gossypium raimondii
GSVIVG01027914001 Vitis vinifera
GSVIVG01028415001 Vitis vinifera
HanXRQChr05g0147801 Helianthus annuus
HanXRQChr08g0223521 Helianthus annuus
HanXRQChr11g0321361 Helianthus annuus
Haze_24698 Corylus avellana
HPP92_025323 Vanilla planifolia
Lalb_Chr03g0036961 Lupinus albus
Lalb_Chr19g0128521 Lupinus albus
Lalb_Chr21g0314111 Lupinus albus
Lj5g0002672 Lotus japonicus
Lj6E621T0 Lonicera japonica
Lj6g0010954 Lotus japonicus
Lsat_1_v5_gn_0_8120 Lactuca sativa
Lsat_1_v5_gn_2_104281 Lactuca sativa
Manes.03G159000 Manihot esculenta
Manes.12G036200 Manihot esculenta
Manes.15G045700 Manihot esculenta
Mapoly0045s0003 Marchantia polymorpha
MBI10_g35429_MAGBIO Magnolia biondii
MCO09G328 Micromonas commoda
MD00G1060300 Malus domestica
MD13G1221200 Malus domestica
MD15G1267400 Malus domestica
MD15G1267500 Malus domestica
Medtr1g045505 Medicago truncatula
Medtr1g069560 Medicago truncatula
Medtr2g055920 Medicago truncatula
MELO3C023044.2 Cucumis melo
Migut.D00472 Erythranthe guttata
Migut.N00301 Erythranthe guttata
Nitab4.5_0000326g0310 Nicotiana tabacum
Nitab4.5_0000592g0420 Nicotiana tabacum
Nitab4.5_0002210g0040 Nicotiana tabacum
Nitab4.5_0009671g0040 Nicotiana tabacum
Nn1g02957 Nelumbo nucifera
Nn3g19777 Nelumbo nucifera
Oeu011221.1 Olea europaea
Os02g0131600 Oryza sativa ssp. japonica
Os02g0496900 Oryza sativa ssp. japonica
Peaxi162Scf00319g00058 Petunia axillaris
Peaxi162Scf01157g00006 Petunia axillaris
PGR031G2487 Punica granatum
PGSC0003DMG400013457 Solanum tuberosum
Phvul.007G189500 Phaseolus vulgaris
Potri.002G257200 Populus trichocarpa
Potri.014G192601 Populus trichocarpa
Pp3c24_1490 Physcomitrium patens
Prupe.1G047800 Prunus persica
Prupe.8G216100 Prunus persica
Psat6g062760 Pisum sativum
PSO013G0207 Papaver somniferum
PSO832G0849 Papaver somniferum
QL06p020998 Quercus lobata
QL12p002452 Quercus lobata
RcHm_v2.0_Chr4g0395371 Rosa chinensis
RcHm_v2.0_Chr6g0286751 Rosa chinensis
Rhsim02G0043700 Rhododendron simsii
Rhsim04G0172400 Rhododendron simsii
Sabra02G0195600 Salix brachista
Sabra14G0143300 Salix brachista
SalBow4G2851 Salvia bowleyana
SalBow6G3362 Salvia bowleyana
Sc13g0003120 Simmondsia chinensis
Sed0011790 Sechium edule
Sed0015699 Sechium edule
Sed0016490 Sechium edule
Sed0017794 Sechium edule
SEGI_13440 Sequoiadendron giganteum
SHI01392 Sapria himalayana
SMO145G0028 Selaginella moellendorffii
SMO358G0128 Selaginella moellendorffii
Solyc03g005700.1 Solanum lycopersicum
Solyc06g008120.1 Solanum lycopersicum
Sopen03g001710 Solanum pennellii
Sopen06g002930 Solanum pennellii
Sp1g02890 Schrenkiella parvula
Sp2g08800 Schrenkiella parvula
TAR362G0673 Trochodendron aralioides
TAR365G0976 Trochodendron aralioides
TAR369G0184 Trochodendron aralioides
TAR633G0085 Trochodendron aralioides
TAR633G0988 Trochodendron aralioides
TAR633G1475 Trochodendron aralioides
TAR636G2865 Trochodendron aralioides
TAR688G0001 Trochodendron aralioides
THA.LOC104801123 Tarenaya hassleriana
THA.LOC104815972 Tarenaya hassleriana
Thecc.01G251100 Theobroma cacao
Thecc.04G263900 Theobroma cacao
Thhalv10003294m.g Eutrema salsugineum
Thhalv10009189m.g Eutrema salsugineum
TPR.G20736 Trifolium pratense
TPR.G5650 Trifolium pratense
TWI09G0019 Tripterygium wilfordii
TWI53G1829 Tripterygium wilfordii
TWI73G1070 Tripterygium wilfordii
unitig_0.g2245 Utricularia gibba
unitig_52.g17406 Utricularia gibba
vmacro15478 Vaccinium macrocarpon
Zm00001eb038560 Zea mays

User provided reference genes

Program Settings