Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p04730 Brassica napus
A08p07970 Brassica napus
Aa31LG6G8980 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4168 Anthoceros agrestis
Actinidia27336 Actinidia chinensis
Actinidia29577 Actinidia chinensis
Actinidia33153 Actinidia chinensis
Actinidia33154 Actinidia chinensis
Actinidia33155 Actinidia chinensis
Actinidia33156 Actinidia chinensis
Ah.05g168580 Amaranthus hybridus
AL1G50870 Arabidopsis lyrata
AL1G50880 Arabidopsis lyrata
Aqoxy5G01966 Aquilegia oxysepala
Aqoxy5G02503 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.L14VXE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R8EQGM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZST20A Arachis hypogaea
AT1G36160 Arabidopsis thaliana
AT1G36180 Arabidopsis thaliana
ATR0041G028 Amborella trichopoda
ATR0564G238 Amborella trichopoda
Atru.chr13.1263 Acer truncatum
AUR62022354 Chenopodium quinoa
AUR62034355 Chenopodium quinoa
BcaB04g17823 Brassica carinata
BcaB07g33794 Brassica carinata
BcaC07g37499 Brassica carinata
BcaC08g43005 Brassica carinata
BolC6t35373H Brassica oleracea
BolC8t47818H Brassica oleracea
BraA06t23676Z Brassica rapa
BraA08t32819Z Brassica rapa
C06p02460 Brassica napus
CAN.G12.31 Capsicum annuum
CAN.G182.15 Capsicum annuum
CANSAT11G0938 Cannabis sativa
CANSAT25G3899 Cannabis sativa
CARHR034860 Cardamine hirsuta
CARHR034870 Cardamine hirsuta
CARHR034880 Cardamine hirsuta
CARHR034890 Cardamine hirsuta
CARHR283610 Cardamine hirsuta
CARHR283620 Cardamine hirsuta
Carub.0001s3360 Capsella rubella
Carub.0001s3361 Capsella rubella
Ca_15227_v3 Cicer arietinum L.
CBR_g21136 Chara braunii
Cc10_g05850 Coffea canephora
CDE05G1314 Ceratophyllum demersum
CDE05G2113 Ceratophyllum demersum
CDE05G3043 Ceratophyllum demersum
Cfa015924 Carpinus fangiana
Cfa022865 Carpinus fangiana
Ciclev10000007m.g Citrus clementina
CiPaw.05G233000 Carya illinoinensis
CiPaw.06G022200 Carya illinoinensis
ClCG03G009000 Citrullus lanatus
COL.COLO4_16461 Corchorus olitorius
Cpa.g.sc66.90 Carica papaya
Cre08.g373050 Chlamydomonas reinhardtii
CsaV3_5G023610 Cucumis sativus L.
CSS0006750 Camellia sinensis var. sinensis
CSS0020243 Camellia sinensis var. sinensis
CSS0020930 Camellia sinensis var. sinensis
DCAR_013178 Daucus carota
Dinv13041 Davidia involucrata
Dinv44744 Davidia involucrata
Dinv44745 Davidia involucrata
Duzib116G0371 Durio zibethinus
ECA232G1190 Erigeron canadensis
ECA236G3667 Erigeron canadensis
ECA236G4037 Erigeron canadensis
EL10Ac1g01671 Beta vulgaris
Eucgr.F00484 Eucalyptus grandis
FAN04G2782 Fragaria x ananassa
FAN08G1690 Fragaria x ananassa
FAN08G3668 Fragaria x ananassa
FAN13G2833 Fragaria x ananassa
FAN18G1561 Fragaria x ananassa
FvH4_5g38000 Fragaria vesca
Glyma.04G104900 Glycine max
Glyma.06G105900 Glycine max
Glyma.07G137400 Glycine max
Gohir.A01G186450 Gossypium hirsutum
Gohir.A01G186501 Gossypium hirsutum
Gohir.A01G186551 Gossypium hirsutum
Gohir.A01G186651 Gossypium hirsutum
Gohir.A05G268100 Gossypium hirsutum
Gohir.D01G183100 Gossypium hirsutum
Gohir.D05G269700 Gossypium hirsutum
Gorai.002G219400 Gossypium raimondii
Gorai.009G282300 Gossypium raimondii
GSVIVG01008991001 Vitis vinifera
HanXRQChr05g0147231 Helianthus annuus
HanXRQChr05g0147241 Helianthus annuus
HanXRQChr11g0320961 Helianthus annuus
Haze_00572 Corylus avellana
Haze_26794 Corylus avellana
Hma1.2p1_0120F.1_g057070 Hydrangea macrophylla
HPP92_027255 Vanilla planifolia
Hund17528 Selenicereus undatus
Lalb_Chr08g0241871 Lupinus albus
Lalb_Chr11g0065541 Lupinus albus
Lj1g0005089 Lotus japonicus
Lj1g0014764 Lotus japonicus
Lj1g0019241 Lotus japonicus
Lj4C108T3 Lonicera japonica
Lj5g0021145 Lotus japonicus
Lj6g0012463 Lotus japonicus
Lsat_1_v5_gn_3_57521 Lactuca sativa
Lsat_1_v5_gn_5_38561 Lactuca sativa
Lsat_1_v5_gn_9_44420 Lactuca sativa
Manes.02G155300 Manihot esculenta
Manes.02G155501 Manihot esculenta
Manes.18G070300 Manihot esculenta
Mapoly0002s0049 Marchantia polymorpha
MBI02_g30884_MAGBIO Magnolia biondii
MCO01G438 Micromonas commoda
MCO15G166 Micromonas commoda
MD08G1178000 Malus domestica
MD15G1363500 Malus domestica
Medtr3g073820 Medicago truncatula
Medtr3g073860 Medicago truncatula
MELO3C000599.2 Cucumis melo
MELO3C022793.2 Cucumis melo
Migut.C00221 Erythranthe guttata
MSTRG.944 Avicennia marina
Nitab4.5_0000421g0140 Nicotiana tabacum
Nitab4.5_0000469g0180 Nicotiana tabacum
Nitab4.5_0005253g0020 Nicotiana tabacum
Nitab4.5_0006548g0020 Nicotiana tabacum
Nn1g05275 Nelumbo nucifera
Nn5g29020 Nelumbo nucifera
Oeu024555.1 Olea europaea
Os05g0295300 Oryza sativa ssp. japonica
Os10g0363300 Oryza sativa ssp. japonica
Peaxi162Scf00030g01821 Petunia axillaris
Peaxi162Scf00160g01527 Petunia axillaris
Peaxi162Scf00310g00013 Petunia axillaris
Peaxi162Scf00310g00211 Petunia axillaris
PGR042G1140 Punica granatum
PGSC0003DMG400008551 Solanum tuberosum
Phvul.009G028700 Phaseolus vulgaris
Potri.002G092700 Populus trichocarpa
Potri.005G169100 Populus trichocarpa
Pp3c13_14480 Physcomitrium patens
Pp3c3_15800 Physcomitrium patens
Pp3c4_17500 Physcomitrium patens
PRCOL_00001984 Prasinoderma coloniale
PRCOL_00006044 Prasinoderma coloniale
Prupe.1G512000 Prunus persica
Psat4g123920 Pisum sativum
Psat4g213440 Pisum sativum
Psat5g137080 Pisum sativum
PSO210G7545 Papaver somniferum
PSO447G0125 Papaver somniferum
QL12p035954 Quercus lobata
RcHm_v2.0_Chr1g0360271 Rosa chinensis
RcHm_v2.0_Chr7g0239931 Rosa chinensis
Rhsim07G0177500 Rhododendron simsii
Rhsim07G0177600 Rhododendron simsii
Rhsim07G0200500 Rhododendron simsii
Sabra02G0073200 Salix brachista
Sc04g0006510 Simmondsia chinensis
Sc20g0003310 Simmondsia chinensis
Sed0010592 Sechium edule
SEGI_04864 Sequoiadendron giganteum
SEGI_22371 Sequoiadendron giganteum
SGA_v2.0_scaffold201G41423 Striga asiatica
SHI09383 Sapria himalayana
SHI09637 Sapria himalayana
SHI09638 Sapria himalayana
SHI09639 Sapria himalayana
SMO336G0002 Selaginella moellendorffii
SMO336G0042 Selaginella moellendorffii
SMO347G0105 Selaginella moellendorffii
Solyc12g056940.2 Solanum lycopersicum
Sopen12g029600 Solanum pennellii
Sp1g30640 Schrenkiella parvula
TAR381G1558 Trochodendron aralioides
TAR625G0333 Trochodendron aralioides
TAR625G1432 Trochodendron aralioides
THA.LOC104813126 Tarenaya hassleriana
Thecc.08G111500 Theobroma cacao
Thhalv10003506m.g Eutrema salsugineum
Thhalv10005726m.g Eutrema salsugineum
TPR.G28948 Trifolium pratense
TPR.G34613 Trifolium pratense
TWI12G0718 Tripterygium wilfordii
TWI56G0794 Tripterygium wilfordii
unitig_46.g18003 Utricularia gibba
vmacro04766 Vaccinium macrocarpon
VMungo1309G3072 Vigna mungo
Zm00001eb028920 Zea mays
Zm00001eb086560 Zea mays
Zm00001eb189990 Zea mays
Zm00001eb223980 Zea mays
Zm00001eb367400 Zea mays
Zm00001eb419400 Zea mays
Zm00001eb428980 Zea mays

User provided reference genes

Program Settings