Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p04090 Brassica napus
A08p16910 Brassica napus
A08p16920 Brassica napus
Aa31LG2G16230 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.2188 Anthoceros agrestis
Actinidia00496 Actinidia chinensis
Ah.01g019670 Amaranthus hybridus
AL7G16920 Arabidopsis lyrata
Aqoxy5G01718 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3X9B1A Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.KQT20N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VN2ELX Arachis hypogaea
AT4G34350 Arabidopsis thaliana
ATR0733G156 Amborella trichopoda
Atru.chr5.2925 Acer truncatum
AUR62011363 Chenopodium quinoa
AUR62016698 Chenopodium quinoa
BcaB01g01634 Brassica carinata
BcaB03g11839 Brassica carinata
BcaB08g34928 Brassica carinata
BcaC01g00910 Brassica carinata
BcaNung06042 Brassica carinata
BcaNung06043 Brassica carinata
BolC1t00430H Brassica oleracea
BolC1t00431H Brassica oleracea
BraA01t00397Z Brassica rapa
BraA08t33655Z Brassica rapa
C01p04450 Brassica napus
C03p85850 Brassica napus
CAN.G1665.7 Capsicum annuum
CAN.G1665.8 Capsicum annuum
CAN.G322.105 Capsicum annuum
CAN.G339.6 Capsicum annuum
CAN.G339.7 Capsicum annuum
CANSAT25G3185 Cannabis sativa
CARHR242430 Cardamine hirsuta
Carub.0007s0598 Capsella rubella
Carub.0127s0001 Capsella rubella
Ca_20842_v3 Cicer arietinum L.
Ca_20844_v3 Cicer arietinum L.
Cc02_g17960 Coffea canephora
CDE01G0637 Ceratophyllum demersum
CDE02G0624 Ceratophyllum demersum
Cfa004972 Carpinus fangiana
Ciclev10028350m.g Citrus clementina
Ciclev10028381m.g Citrus clementina
Ciclev10028384m.g Citrus clementina
Ciclev10029878m.g Citrus clementina
CiPaw.05G060700 Carya illinoinensis
ClCG00G005230 Citrullus lanatus
ClCG02G005330 Citrullus lanatus
ClCG09G017830 Citrullus lanatus
COL.COLO4_32468 Corchorus olitorius
Cpa.g.sc62.104 Carica papaya
Cre08.g372950 Chlamydomonas reinhardtii
CsaV3_2G014440 Cucumis sativus L.
CsaV3_7G010240 Cucumis sativus L.
DCAR_022092 Daucus carota
DCAR_022093 Daucus carota
DCAR_028999 Daucus carota
Dinv23560 Davidia involucrata
Dinv42096 Davidia involucrata
Duzib052G0241 Durio zibethinus
Duzib132G0112 Durio zibethinus
ECA236G0098 Erigeron canadensis
ECA240G3281 Erigeron canadensis
EL10Ac9g21764 Beta vulgaris
Eucgr.C00644 Eucalyptus grandis
Eucgr.I01241 Eucalyptus grandis
FAN15G1842 Fragaria x ananassa
FAN15G2510 Fragaria x ananassa
FAN20G1435 Fragaria x ananassa
FAN20G1903 Fragaria x ananassa
FAN24G1411 Fragaria x ananassa
FAN24G2951 Fragaria x ananassa
FAN27G0530 Fragaria x ananassa
FvH4_2g07930 Fragaria vesca
FvH4_2g07940 Fragaria vesca
Glyma.11G120900 Glycine max
Glyma.12G046000 Glycine max
Gohir.A03G180200 Gossypium hirsutum
Gohir.A12G018100 Gossypium hirsutum
Gohir.A13G048200 Gossypium hirsutum
Gohir.D02G203028 Gossypium hirsutum
Gohir.D12G018700 Gossypium hirsutum
Gohir.D13G046600 Gossypium hirsutum
Gorai.005G229100 Gossypium raimondii
Gorai.008G019000 Gossypium raimondii
Gorai.013G052300 Gossypium raimondii
GSVIVG01003497001 Vitis vinifera
GSVIVG01031908001 Vitis vinifera
HanXRQChr08g0216551 Helianthus annuus
HanXRQChr09g0250651 Helianthus annuus
HanXRQChr09g0250661 Helianthus annuus
HanXRQChr14g0460791 Helianthus annuus
HanXRQChr16g0505021 Helianthus annuus
HanXRQChr16g0505031 Helianthus annuus
Haze_02422 Corylus avellana
Hma1.2p1_0584F.1_g183510 Hydrangea macrophylla
HPP92_007695 Vanilla planifolia
Hund06217 Selenicereus undatus
Hund29766 Selenicereus undatus
Hund29768 Selenicereus undatus
Lalb_Chr01g0002771 Lupinus albus
Lalb_Chr03g0025841 Lupinus albus
Lalb_Chr19g0138541 Lupinus albus
Lj3g0010099 Lotus japonicus
Lj5C201T11 Lonicera japonica
Lsat_1_v5_gn_3_8461 Lactuca sativa
Lsat_1_v5_gn_4_6280 Lactuca sativa
Lsat_1_v5_gn_7_89801 Lactuca sativa
Lsat_1_v5_gn_7_89821 Lactuca sativa
Lsat_1_v5_gn_8_5720 Lactuca sativa
Lsat_1_v5_gn_9_109300 Lactuca sativa
Manes.15G147700 Manihot esculenta
Manes.17G098700 Manihot esculenta
Mapoly0048s0083 Marchantia polymorpha
MBI16_g10983_MAGBIO Magnolia biondii
MCO16G504 Micromonas commoda
MD05G1071900 Malus domestica
MD10G1082800 Malus domestica
Medtr1g090787 Medicago truncatula
Medtr4g069030 Medicago truncatula
Medtr4g069070 Medicago truncatula
MELO3C018407.2 Cucumis melo
MELO3C021949.2 Cucumis melo
Migut.B00272 Erythranthe guttata
Migut.B00274 Erythranthe guttata
MSTRG.16789 Avicennia marina
MSTRG.5388 Avicennia marina
Nitab4.5_0004280g0070 Nicotiana tabacum
Nitab4.5_0004287g0090 Nicotiana tabacum
Nn5g29484 Nelumbo nucifera
Oeu010563.1 Olea europaea
Oeu021891.1 Olea europaea
Oeu027591.1 Olea europaea
Oeu047352.1 Olea europaea
Os03g0731900 Oryza sativa ssp. japonica
Os03g0732000 Oryza sativa ssp. japonica
Peaxi162Scf00016g01127 Petunia axillaris
PGR042G2159 Punica granatum
PGSC0003DMG400025165 Solanum tuberosum
Phvul.011G047900 Phaseolus vulgaris
Potri.004G150400 Populus trichocarpa
Potri.009G111569 Populus trichocarpa
Potri.T124604 Populus trichocarpa
Pp3c10_22080 Physcomitrium patens
Pp3c20_3940 Physcomitrium patens
Pp3c23_440 Physcomitrium patens
PRCOL_00004926 Prasinoderma coloniale
Prupe.8G105800 Prunus persica
Prupe.8G105900 Prunus persica
Psat7g185200 Pisum sativum
Psat7g185320 Pisum sativum
PSO170G0120 Papaver somniferum
PSO700G0135 Papaver somniferum
QL11p040128 Quercus lobata
QL11p040883 Quercus lobata
QL11p040938 Quercus lobata
QL11p041455 Quercus lobata
QL11p041692 Quercus lobata
QL11p041933 Quercus lobata
QL11p042019 Quercus lobata
QL11p042219 Quercus lobata
RcHm_v2.0_Chr6g0262391 Rosa chinensis
RcHm_v2.0_Chr6g0262401 Rosa chinensis
Rhsim03G0115600 Rhododendron simsii
Rhsim11G0172900 Rhododendron simsii
Rhsim11G0173000 Rhododendron simsii
Rhsim12G0078400 Rhododendron simsii
Sabra09G0085200 Salix brachista
SalBow6G0842 Salvia bowleyana
SalBow6G6275 Salvia bowleyana
SalBow6G6810 Salvia bowleyana
Sc08g0000280 Simmondsia chinensis
Sed0006571 Sechium edule
Sed0014801 Sechium edule
SEGI_04933 Sequoiadendron giganteum
SEGI_11258 Sequoiadendron giganteum
SEGI_14759 Sequoiadendron giganteum
SGA_v2.0_scaffold32G13142 Striga asiatica
SGA_v2.0_scaffold58G20576 Striga asiatica
SMO343G0072 Selaginella moellendorffii
SMO367G0888 Selaginella moellendorffii
Solyc01g109300.3 Solanum lycopersicum
Sopen01g051490 Solanum pennellii
Sp7g32140 Schrenkiella parvula
TAR628G0478 Trochodendron aralioides
THA.LOC104804358 Tarenaya hassleriana
THA.LOC104819599 Tarenaya hassleriana
Thecc.02G121400 Theobroma cacao
Thhalv10025124m.g Eutrema salsugineum
TPR.G15573 Trifolium pratense
TPR.G23075 Trifolium pratense
TPR.G28053 Trifolium pratense
TWI31G0489 Tripterygium wilfordii
TWI79G0015 Tripterygium wilfordii
unitig_0.g68 Utricularia gibba
unitig_0.g69 Utricularia gibba
vmacro02146 Vaccinium macrocarpon
vmacro02147 Vaccinium macrocarpon
VMungo1127G0238 Vigna mungo
Zm00001eb056240 Zea mays

User provided reference genes

Program Settings