Gene: Pp3c23_440
General Information
Structural Information
- Species Physcomitrium patens
- Gene Identifier Pp3c23_440
- Transcript Identifier Pp3c23_440V3.1
- Gene Type Coding gene
- Location Chr23 : 266805-270394 : positive
Gene Family Information
- ID HOM05D003372
- #Genes/#Species 203/97
- Phylogenetic origin
- ID ORTHO05D004539
- #Genes/#Species 177/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- name Pp3c23_440V3.1
- pacid 32949938
- alias Phpat.023G001000
- alias Phypa_194018
- alias Pp1s210_40V6
- uniprot A9TDQ1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019288 | IEA | GOA Database | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | |
| GO:0019288 | IEA | InterPro | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | |
| GO:0050992 | IEA | GOA Database | dimethylallyl diphosphate biosynthetic process | |
| GO:0050992 | IEA | InterPro | dimethylallyl diphosphate biosynthetic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | GOA Database | metal ion binding | |
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0051745 | IEA | GOA Database | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | |
| GO:0051745 | IEA | InterPro | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | |
| GO:0051539 | IEA | GOA Database | 4 iron, 4 sulfur cluster binding | |
| GO:0051536 | IEA | GOA Database | iron-sulfur cluster binding | |
| GO:0046429 | ISO | PLAZA Integrative Orthology | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | AT4G34350 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT4G34350 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G34350 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003451 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
| Mapman id | Description |
|---|---|
| 9.1.2.8 | Secondary metabolism.terpenoids.methylerythritol phosphate (MEP) pathway.4-hydroxy-3-methylbut-2-enyl diphosphate reductase |