Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p44300 Brassica napus
A06p39320 Brassica napus
Aa31LG5G13060 Aethionema arabicum
Aa31sc202G30 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.1836 Anthoceros agrestis
Actinidia18830 Actinidia chinensis
Actinidia35201 Actinidia chinensis
Ah.16g101920 Amaranthus hybridus
Ah.16g105750 Amaranthus hybridus
AL3G42040 Arabidopsis lyrata
AL834U10010 Arabidopsis lyrata
AL8G20910 Arabidopsis lyrata
AL8G20960 Arabidopsis lyrata
Aqoxy1G04276 Aquilegia oxysepala
Aqoxy3G01284 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0B41PU Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.65EY62 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8VJ98X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SQZ1L0 Arachis hypogaea
AT2G04400 Arabidopsis thaliana
AT5G48220 Arabidopsis thaliana
ATR0751G192 Amborella trichopoda
Atru.chr6.3414 Acer truncatum
AUR62008962 Chenopodium quinoa
AUR62009285 Chenopodium quinoa
AUR62014541 Chenopodium quinoa
AUR62039696 Chenopodium quinoa
BcaB06g26784 Brassica carinata
BcaB08g34466 Brassica carinata
BcaC01g03208 Brassica carinata
BcaC01g03298 Brassica carinata
BcaC01g03322 Brassica carinata
BcaC06g30818 Brassica carinata
BcaC06g35870 Brassica carinata
BcaC08g43008 Brassica carinata
BolC3t17627H Brassica oleracea
BolC3t17665H Brassica oleracea
BolC3t17760H Brassica oleracea
BolC6t35385H Brassica oleracea
BolC7t41475H Brassica oleracea
BolC7t44416H Brassica oleracea
BolC9t55910H Brassica oleracea
BraA03t13559Z Brassica rapa
BraA06t26847Z Brassica rapa
C03p53670 Brassica napus
C03p54710 Brassica napus
C06p02570 Brassica napus
C07p10260 Brassica napus
C07p10270 Brassica napus
C07p38950 Brassica napus
C09p30460 Brassica napus
CAN.G126.88 Capsicum annuum
CAN.G338.38 Capsicum annuum
CANSAT64G2473 Cannabis sativa
CARHR102260 Cardamine hirsuta
CARHR184070 Cardamine hirsuta
Carub.0003s2605 Capsella rubella
Carub.0008s0779 Capsella rubella
Ca_06031_v3 Cicer arietinum L.
CBR_g10789 Chara braunii
Cc00_g28210 Coffea canephora
Cc04_g11110 Coffea canephora
CDE02G1466 Ceratophyllum demersum
CDE02G1598 Ceratophyllum demersum
Cfa014212 Carpinus fangiana
Cfa025268 Carpinus fangiana
Ciclev10015498m.g Citrus clementina
CiPaw.03G282800 Carya illinoinensis
ClCG02G002960 Citrullus lanatus
COL.COLO4_19639 Corchorus olitorius
Cpa.g.sc136.36 Carica papaya
Cpa.g.sc136.37 Carica papaya
Cre13.g602350 Chlamydomonas reinhardtii
CsaV3_7G002440 Cucumis sativus L.
CSS0040673 Camellia sinensis var. sinensis
DCAR_019671 Daucus carota
Dinv26592 Davidia involucrata
Duzib138G0143 Durio zibethinus
ECA234G0856 Erigeron canadensis
ECA236G1196 Erigeron canadensis
EL10Ac2g04021 Beta vulgaris
EL10Ac2g04609 Beta vulgaris
EL10As9g23925 Beta vulgaris
Eucgr.A01368 Eucalyptus grandis
FAN02G0729 Fragaria x ananassa
FAN05G5269 Fragaria x ananassa
FAN10G3881 Fragaria x ananassa
FAN14G5851 Fragaria x ananassa
FvH4_6g40500 Fragaria vesca
Glyma.02G259000 Glycine max
Glyma.14G053300 Glycine max
Gohir.A07G163900 Gossypium hirsutum
Gohir.A11G148200 Gossypium hirsutum
Gohir.D07G170900 Gossypium hirsutum
Gohir.D11G155000 Gossypium hirsutum
Gorai.001G191000 Gossypium raimondii
Gorai.007G165300 Gossypium raimondii
GSVIVG01030116001 Vitis vinifera
HanXRQChr10g0306821 Helianthus annuus
HanXRQChr11g0329411 Helianthus annuus
Haze_12603 Corylus avellana
Haze_12614 Corylus avellana
Hma1.2p1_0599F.1_g187060 Hydrangea macrophylla
Hma1.2p1_0629F.1_g192240 Hydrangea macrophylla
HPP92_022822 Vanilla planifolia
Hund03398 Selenicereus undatus
Hund13735 Selenicereus undatus
Lalb_Chr04g0250271 Lupinus albus
Lalb_Chr10g0105441 Lupinus albus
Lj1A799T34 Lonicera japonica
Lj8A136T94 Lonicera japonica
LjContig00357g0014369 Lotus japonicus
Lsat_1_v5_gn_5_122300 Lactuca sativa
Lsat_1_v5_gn_7_97420 Lactuca sativa
Manes.12G063602 Manihot esculenta
Mapoly0007s0091 Marchantia polymorpha
MBI14_g24035_MAGBIO Magnolia biondii
MCO11G068 Micromonas commoda
MD09G1129300 Malus domestica
MD17G1118200 Malus domestica
Medtr5g084030 Medicago truncatula
MELO3C024189.2 Cucumis melo
Migut.D02018 Erythranthe guttata
Migut.O00185 Erythranthe guttata
MSTRG.9698 Avicennia marina
Nitab4.5_0000025g0230 Nicotiana tabacum
Nitab4.5_0000510g0170 Nicotiana tabacum
Nitab4.5_0000774g0060 Nicotiana tabacum
Nitab4.5_0003542g0080 Nicotiana tabacum
Nn1g03151 Nelumbo nucifera
Nn6g34363 Nelumbo nucifera
Oeu023460.1 Olea europaea
Oeu023461.1 Olea europaea
Oeu045495.1 Olea europaea
Oeu045496.1 Olea europaea
Os04g0467700 Oryza sativa ssp. japonica
Os08g0320400 Oryza sativa ssp. japonica
Os09g0255400 Oryza sativa ssp. japonica
Peaxi162Scf00089g01131 Petunia axillaris
Peaxi162Scf00089g01132 Petunia axillaris
Peaxi162Scf00801g00730 Petunia axillaris
PGR031G3285 Punica granatum
PGSC0003DMG400015153 Solanum tuberosum
Phvul.008G218200 Phaseolus vulgaris
Potri.014G169100 Populus trichocarpa
Pp3c10_25830 Physcomitrium patens
PRCOL_00002196 Prasinoderma coloniale
Prupe.3G196200 Prunus persica
Psat0ss839g0080 Pisum sativum
Psat1g185040 Pisum sativum
Psat2g028840 Pisum sativum
Psat4g199000 Pisum sativum
Psat7g100240 Pisum sativum
PSO210G3015 Papaver somniferum
PSO210G6970 Papaver somniferum
PSO541G3149 Papaver somniferum
PSO675G3120 Papaver somniferum
QL04p067730 Quercus lobata
RcHm_v2.0_Chr2g0155751 Rosa chinensis
RcHm_v2.0_Chr5g0011911 Rosa chinensis
Rhsim04G0030100 Rhododendron simsii
Sabra14G0128900 Salix brachista
SalBow5G1323 Salvia bowleyana
SalBow5G5386 Salvia bowleyana
Sc21g0000490 Simmondsia chinensis
Sed0016337 Sechium edule
SEGI_01884 Sequoiadendron giganteum
SEGI_02806 Sequoiadendron giganteum
SEGI_06301 Sequoiadendron giganteum
SEGI_10339 Sequoiadendron giganteum
SEGI_14362 Sequoiadendron giganteum
SEGI_18782 Sequoiadendron giganteum
SEGI_36697 Sequoiadendron giganteum
SGA_v2.0_scaffold25G10778 Striga asiatica
SHI10170 Sapria himalayana
SMO119G0369 Selaginella moellendorffii
SMO143G0312 Selaginella moellendorffii
SMO163G0046 Selaginella moellendorffii
Solyc03g111850.3 Solanum lycopersicum
Sopen03g030970 Solanum pennellii
Sp2g18590 Schrenkiella parvula
Sp3g23210 Schrenkiella parvula
TAR626G1358 Trochodendron aralioides
TAR629G0562 Trochodendron aralioides
THA.LOC104808841 Tarenaya hassleriana
THA.LOC104819033 Tarenaya hassleriana
Thecc.01G197700 Theobroma cacao
Thecc.01G197800 Theobroma cacao
Thecc.01G198100 Theobroma cacao
Thecc.10G171200 Theobroma cacao
Thhalv10002557m.g Eutrema salsugineum
Thhalv10004384m.g Eutrema salsugineum
TPR.G20196 Trifolium pratense
TWI18G0380 Tripterygium wilfordii
TWI36G0699 Tripterygium wilfordii
TWI75G1649 Tripterygium wilfordii
unitig_21.g20442 Utricularia gibba
vmacro09477 Vaccinium macrocarpon
VMungo0647G0370 Vigna mungo
VMungo0647G1799 Vigna mungo
Zm00001eb309260 Zea mays
Zm00001eb414460 Zea mays
Zm00001eb424560 Zea mays

User provided reference genes

Program Settings