Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p06260 Brassica napus
A05p09200 Brassica napus
A07p21390 Brassica napus
Aa31LG10G8290 Aethionema arabicum
Aa31LG5G21880 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2476 Anthoceros agrestis
Actinidia32470 Actinidia chinensis
AL4G32860 Arabidopsis lyrata
AL5G34000 Arabidopsis lyrata
Aqoxy2G01564 Aquilegia oxysepala
Aqoxy5G02878 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HU14K8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PZQ5IT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R92IIS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.URL2CG Arachis hypogaea
AT2G36680 Arabidopsis thaliana
AT3G53120 Arabidopsis thaliana
ATR0661G393 Amborella trichopoda
ATR1158G038 Amborella trichopoda
AUR62027614 Chenopodium quinoa
AUR62030232 Chenopodium quinoa
AUR62040195 Chenopodium quinoa
AUR62042710 Chenopodium quinoa
BcaB02g08535 Brassica carinata
BcaB02g09341 Brassica carinata
BcaC02g09182 Brassica carinata
BcaC02g11785 Brassica carinata
BcaC03g18177 Brassica carinata
BolC4t22777H Brassica oleracea
BolC4t22795H Brassica oleracea
BolC4t25549H Brassica oleracea
BraA04t16331Z Brassica rapa
BraA05t19876Z Brassica rapa
BraA07t29826Z Brassica rapa
C04p39770 Brassica napus
CAN.G541.25 Capsicum annuum
CAN.G673.16 Capsicum annuum
CAN.G728.3 Capsicum annuum
CAN.G729.4 Capsicum annuum
CARHR130970 Cardamine hirsuta
CARHR162970 Cardamine hirsuta
Carub.0004s1850 Capsella rubella
Carub.0005s1965 Capsella rubella
Ca_08937_v3 Cicer arietinum L.
Ca_30110_v3 Cicer arietinum L.
CBR_g30234 Chara braunii
Cc06_g04780 Coffea canephora
CDE05G1858 Ceratophyllum demersum
CDE11G0254 Ceratophyllum demersum
Ciclev10009355m.g Citrus clementina
CiPaw.09G005100 Carya illinoinensis
CiPaw.10G002500 Carya illinoinensis
ClCG10G019650 Citrullus lanatus
COL.COLO4_22254 Corchorus olitorius
Cpa.g.sc5.126 Carica papaya
Cre08.g362550 Chlamydomonas reinhardtii
CsaV3_3G036470 Cucumis sativus L.
CSS0010979 Camellia sinensis var. sinensis
CSS0011074 Camellia sinensis var. sinensis
CSS0013430 Camellia sinensis var. sinensis
CSS0026446 Camellia sinensis var. sinensis
CSS0048678 Camellia sinensis var. sinensis
CSS0050150 Camellia sinensis var. sinensis
DCAR_017653 Daucus carota
DCAR_017656 Daucus carota
DCAR_020798 Daucus carota
Dinv35835 Davidia involucrata
Dinv37357 Davidia involucrata
Duzib093G1696 Durio zibethinus
Duzib106G1154 Durio zibethinus
Duzib128G0277 Durio zibethinus
ECA233G2861 Erigeron canadensis
ECA248G1326 Erigeron canadensis
EL10Ac7g16703 Beta vulgaris
EL10As10g23959 Beta vulgaris
Eucgr.A01593 Eucalyptus grandis
FAN02G0897 Fragaria x ananassa
FAN05G2073 Fragaria x ananassa
FAN05G5749 Fragaria x ananassa
FAN14G4580 Fragaria x ananassa
FvH4_1g29292 Fragaria vesca
FvH4_6g17210 Fragaria vesca
Glyma.03G188100 Glycine max
Glyma.10G063400 Glycine max
Glyma.13G147900 Glycine max
Glyma.19G188300 Glycine max
Glyma.20G077501 Glycine max
Gohir.A04G068400 Gossypium hirsutum
Gohir.A11G323000 Gossypium hirsutum
Gohir.D04G106900 Gossypium hirsutum
Gohir.D11G342100 Gossypium hirsutum
Gorai.007G372100 Gossypium raimondii
Gorai.009G411000 Gossypium raimondii
GSVIVG01033713001 Vitis vinifera
HanXRQChr01g0019311 Helianthus annuus
HanXRQChr11g0345961 Helianthus annuus
HanXRQChr13g0400531 Helianthus annuus
Haze_19478 Corylus avellana
Hma1.2p1_0137F.1_g062430 Hydrangea macrophylla
Hma1.2p1_0970F.1_g242720 Hydrangea macrophylla
HPP92_020787 Vanilla planifolia
HPP92_020831 Vanilla planifolia
Hund12309 Selenicereus undatus
Lalb_Chr02g0155361 Lupinus albus
Lj1A203T55 Lonicera japonica
Lj1g0027813 Lotus japonicus
Lj3A995G63 Lonicera japonica
Lsat_1_v5_gn_1_64020 Lactuca sativa
Lsat_1_v5_gn_2_100520 Lactuca sativa
Lsat_1_v5_gn_6_28160 Lactuca sativa
Manes.08G015900 Manihot esculenta
Manes.09G048862 Manihot esculenta
Mapoly0070s0080 Marchantia polymorpha
MBI11_g29030_MAGBIO Magnolia biondii
MBI19_g12832_MAGBIO Magnolia biondii
MCO15G178 Micromonas commoda
MD12G1102900 Malus domestica
MD14G1097000 Malus domestica
Medtr7g102780 Medicago truncatula
MELO3C009407.2 Cucumis melo
Migut.F01371 Erythranthe guttata
Migut.J00474 Erythranthe guttata
Migut.J00476 Erythranthe guttata
MSTRG.5787 Avicennia marina
Nitab4.5_0000725g0070 Nicotiana tabacum
Nitab4.5_0005208g0010 Nicotiana tabacum
Nitab4.5_0009839g0030 Nicotiana tabacum
Nn2g13901 Nelumbo nucifera
Nn6g35170 Nelumbo nucifera
Oeu023984.1 Olea europaea
Oeu031866.1 Olea europaea
Oeu040563.2 Olea europaea
Oeu045244.1 Olea europaea
Os03g0186800 Oryza sativa ssp. japonica
Os03g0572300 Oryza sativa ssp. japonica
Peaxi162Scf00110g00816 Petunia axillaris
Peaxi162Scf00146g00018 Petunia axillaris
PGR142G3973 Punica granatum
PGSC0003DMG400008590 Solanum tuberosum
PGSC0003DMG400028179 Solanum tuberosum
Phvul.001G183500 Phaseolus vulgaris
Phvul.007G226100 Phaseolus vulgaris
Potri.006G119200 Populus trichocarpa
Potri.016G097000 Populus trichocarpa
Pp3c14_24180 Physcomitrium patens
Pp3c17_23280 Physcomitrium patens
Pp3c1_40630 Physcomitrium patens
Pp3c2_570 Physcomitrium patens
Prupe.7G123000 Prunus persica
Psat3g038040 Pisum sativum
Psat6g123960 Pisum sativum
Psat6g124000 Pisum sativum
PSO063G6171 Papaver somniferum
PSO339G1192 Papaver somniferum
PSO339G5958 Papaver somniferum
PSO801G0728 Papaver somniferum
QL07p041377 Quercus lobata
QL07p041392 Quercus lobata
RcHm_v2.0_Chr3g0471291 Rosa chinensis
Rhsim03G0085800 Rhododendron simsii
Rhsim04G0138800 Rhododendron simsii
Sabra06G0093800 Salix brachista
Sabra16G0100200 Salix brachista
SalBow3G2337 Salvia bowleyana
SalBow3G4042 Salvia bowleyana
Sc02g0001390 Simmondsia chinensis
Sc20g0005750 Simmondsia chinensis
Sed0015688 Sechium edule
Sed0022654 Sechium edule
SEGI_00976 Sequoiadendron giganteum
SEGI_20987 Sequoiadendron giganteum
SEGI_26153 Sequoiadendron giganteum
SGA_v2.0_scaffold40G15447 Striga asiatica
SGA_v2.0_scaffold657G53379 Striga asiatica
SGA_v2.0_scaffold75G24816 Striga asiatica
SMO118G0276 Selaginella moellendorffii
SMO144G0012 Selaginella moellendorffii
SMO147G0421 Selaginella moellendorffii
Solyc10g083780.1 Solanum lycopersicum
Solyc10g085810.2 Solanum lycopersicum
Sopen10g033230 Solanum pennellii
Sopen10g035210 Solanum pennellii
Sp4g18950 Schrenkiella parvula
Sp5g09200 Schrenkiella parvula
TAR369G0566 Trochodendron aralioides
TAR633G2316 Trochodendron aralioides
THA.LOC104818582 Tarenaya hassleriana
Thecc.05G075500 Theobroma cacao
Thhalv10010721m.g Eutrema salsugineum
Thhalv10017224m.g Eutrema salsugineum
Thhalv10023701m.g Eutrema salsugineum
TPR.G31682 Trifolium pratense
TWI74G0085 Tripterygium wilfordii
TWI77G0900 Tripterygium wilfordii
unitig_22.g5108 Utricularia gibba
unitig_8.g4120 Utricularia gibba
vmacro07356 Vaccinium macrocarpon
vmacro08805 Vaccinium macrocarpon
vmacro23001 Vaccinium macrocarpon
VMungo0720G0068 Vigna mungo
VMungo1383G1043 Vigna mungo
Zm00001eb006510 Zea mays
Zm00001eb295110 Zea mays
Zm00001eb401560 Zea mays

User provided reference genes

Program Settings